; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010242 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010242
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationscaffold391:1097213..1098725
RNA-Seq ExpressionMS010242
SyntenyMS010242
Gene Ontology termsGO:0048564 - photosystem I assembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0047134 - protein-disulfide reductase activity (molecular function)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040049.1 protein EMBRYO SAC DEVELOPMENT ARREST 3 [Cucumis melo var. makuwa]9.0e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

XP_016900745.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X1 [Cucumis melo]9.0e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

XP_016900746.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Cucumis melo]9.0e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

XP_016900747.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X3 [Cucumis melo]9.0e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

XP_022153852.1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Momordica charantia]4.2e-7098.43Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQFLI+RRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPNS
        NNKGLLRRPDARKLLDKMYNGRLLPNS
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPNS

TrEMBL top hitse value%identityAlignment
A0A1S4DXN8 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X24.4e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

A0A1S4DXP4 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X34.4e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

A0A1S4DYE8 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X14.4e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

A0A5A7TFL6 Protein EMBRYO SAC DEVELOPMENT ARREST 34.4e-6592.06Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQ LI+RRWCLTCLCSS+TL+K++GGTT A ANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPN
        NNKGLLRRPDAR+LLDKMYNGRLLPN
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPN

A0A6J1DK36 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic2.0e-7098.43Show/hide
Query:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
        +GTQFLI+RRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP
Subjt:  QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLP

Query:  NNKGLLRRPDARKLLDKMYNGRLLPNS
        NNKGLLRRPDARKLLDKMYNGRLLPNS
Subjt:  NNKGLLRRPDARKLLDKMYNGRLLPNS

SwissProt top hitse value%identityAlignment
A0A1D6KL43 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic4.2e-4974.19Show/hide
Query:  TRRWCLTCLCSSMTLIKDFGGTTGASANTMD----GKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNK
        +RR CL CL  ++TLI   G   G +A+ M+     K VCRNC GSGAV+CDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNK
Subjt:  TRRWCLTCLCSSMTLIKDFGGTTGASANTMD----GKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNK

Query:  GLLRRPDARKLLDKMYNGRLLPNS
        GLLRRP+A++LLDKMYNG++LP S
Subjt:  GLLRRPDARKLLDKMYNGRLLPNS

B5YAR4 Chaperone protein DnaJ1.3e-0530.95Show/hide
Query:  FGGTTGASANTMDGKPVCRNCG---GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPVCLGTGLPNNK
        FG         ++  P C+  G   G+  V CDMC GTG+ + + +       + T CP C+G G+++   C  C GTG    K
Subjt:  FGGTTGASANTMDGKPVCRNCG---GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPVCLGTGLPNNK

O64750 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic1.9e-4973.28Show/hide
Query:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
        QG Q  ++RR W   C+C+S  LI + +   +  SA  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
Subjt:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG

Query:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS
        TGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Subjt:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS

Q6YUA8 Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic8.5e-5075.81Show/hide
Query:  TRRWCLTCLCSSMTLIKDFGGT----TGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNK
        +RR CL CLC ++TLI   G T     G +++ M    VCRNC GSGAVLCDMCGGTGKWKALNRKRAKDVY FTECPNCYGRGKLVCPVCLGTGLPNNK
Subjt:  TRRWCLTCLCSSMTLIKDFGGT----TGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNK

Query:  GLLRRPDARKLLDKMYNGRLLPNS
        GLLRRPDA+KLLDKMYNG++LP+S
Subjt:  GLLRRPDARKLLDKMYNGRLLPNS

Q7UA76 Chaperone protein DnaJ8.4e-0535.14Show/hide
Query:  CRNCGGSGA------VLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPVCLGTGLPNNKGLLR
        C  CGGSGA        C  CGG G+ +   R       +  ECPNC G G+++   C  C G G+   +  LR
Subjt:  CRNCGGSGA------VLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLV---CPVCLGTGLPNNKGLLR

Arabidopsis top hitse value%identityAlignment
AT2G34860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein1.4e-5073.28Show/hide
Query:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
        QG Q  ++RR W   C+C+S  LI + +   +  SA  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
Subjt:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG

Query:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS
        TGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Subjt:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS

AT2G34860.2 DnaJ/Hsp40 cysteine-rich domain superfamily protein1.4e-5073.28Show/hide
Query:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
        QG Q  ++RR W   C+C+S  LI + +   +  SA  +D KP   CRNC GSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG
Subjt:  QGTQFLITRR-WCLTCLCSSMTLIKD-FGGTTGASANTMDGKP--VCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLG

Query:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS
        TGLPNNKGLLRRP AR+LL+KMYNGRLLP+S
Subjt:  TGLPNNKGLLRRPDARKLLDKMYNGRLLPNS

AT5G06130.1 chaperone protein dnaJ-related8.6e-0535.82Show/hide
Query:  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCPVCLGTGL
        K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP CL TG+
Subjt:  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCPVCLGTGL

AT5G06130.2 chaperone protein dnaJ-related8.6e-0535.82Show/hide
Query:  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCPVCLGTGL
        K  C+ C G+G + C  C  +G   +++   R RA +    V     C NC G GK++CP CL TG+
Subjt:  KPVCRNCGGSGAVLCDMCGGTGKWKALN---RKRAKD----VYEFTECPNCYGRGKLVCPVCLGTGL

AT5G61670.1 Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.7.3e-0431.25Show/hide
Query:  CRNCGGSGAVLCDMCGGTGKW-------KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGL
        C+ C G+G + C  C  TG                +    +   C NC G GK++CP CL TG+
Subjt:  CRNCGGSGAVLCDMCGGTGKW-------KALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGGAACTCAATTCTTGATCACTCGCCGATGGTGCCTCACATGTTTGTGTTCATCCATGACACTGATAAAGGATTTTGGGGGCACGACTGGAGCTAGTGCAAATACCAT
GGATGGAAAACCTGTTTGCCGAAATTGTGGAGGAAGTGGTGCTGTACTTTGTGACATGTGCGGTGGTACAGGCAAATGGAAAGCTCTGAACAGAAAACGGGCTAAGGATG
TCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGTCCTGTTTGTCTAGGAACTGGTTTACCAAATAACAAAGGTCTCCTAAGAAGGCCTGAC
GCACGAAAATTGCTCGATAAGATGTACAATGGTCGCTTGTTACCAAATTCT
mRNA sequenceShow/hide mRNA sequence
CAGGGAACTCAATTCTTGATCACTCGCCGATGGTGCCTCACATGTTTGTGTTCATCCATGACACTGATAAAGGATTTTGGGGGCACGACTGGAGCTAGTGCAAATACCAT
GGATGGAAAACCTGTTTGCCGAAATTGTGGAGGAAGTGGTGCTGTACTTTGTGACATGTGCGGTGGTACAGGCAAATGGAAAGCTCTGAACAGAAAACGGGCTAAGGATG
TCTACGAGTTTACAGAATGTCCAAATTGTTATGGTAGAGGAAAACTTGTATGTCCTGTTTGTCTAGGAACTGGTTTACCAAATAACAAAGGTCTCCTAAGAAGGCCTGAC
GCACGAAAATTGCTCGATAAGATGTACAATGGTCGCTTGTTACCAAATTCT
Protein sequenceShow/hide protein sequence
QGTQFLITRRWCLTCLCSSMTLIKDFGGTTGASANTMDGKPVCRNCGGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKLVCPVCLGTGLPNNKGLLRRPD
ARKLLDKMYNGRLLPNS