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MS010245 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010245
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold391:1112322..1112702
RNA-Seq ExpressionMS010245
SyntenyMS010245
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570356.1 hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia]8.8e-4477.95Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MARYY  ++ Y + EY  LT PP++LCVFG IL+LVM FSWYIFYDS L+++I QLKLFLLTVPLLLLLLLHLLSLGLPFL+PLPEQ+SLHRAG SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFPFGYR
        A+LL+FLLY+ISHQSHYH+RWFPFGYR
Subjt:  ALLLIFLLYLISHQSHYHQRWFPFGYR

PON65170.1 Transmembrane protein [Parasponia andersonii]2.2e-3162.9Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG
        MARYYNN+YSY+  +YF++   P+ LC F +IL  ++GFSWYI Y++  ++LI Q+KLFL+ VPLLLLL++H LS  GL FL+PLPEQDSLHRAG SPWG
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG

Query:  VALLLIFLLYLISHQSHYHQRWFP
        V LLL+FLL++IS+QS +H+RWFP
Subjt:  VALLLIFLLYLISHQSHYHQRWFP

PON93547.1 Transmembrane protein [Trema orientale]4.5e-3262.9Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG
        MARYYNN+YSY+  +YF++   P+ LC F +IL  ++GFSWYI Y++  ++LI Q+KLFL+ VPLLLLL++H LS  G+PFL+PLPEQDSLHRAG SPWG
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG

Query:  VALLLIFLLYLISHQSHYHQRWFP
        V LLL+FLL++IS+QS +H+RWFP
Subjt:  VALLLIFLLYLISHQSHYHQRWFP

XP_007014761.1 PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao]3.6e-2958.4Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MARYY + +  Y      L+ PP+ LC F  IL  V+GFSWYI Y+S+ ++ I QLK FL+  P++LLLL+H  S  +PFL+PLPEQDSLHR G SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFPFG
        ALLL+FLLY+IS+QS +H+RWFP G
Subjt:  ALLLIFLLYLISHQSHYHQRWFPFG

XP_022756288.1 uncharacterized protein LOC111304026 [Durio zibethinus]6.1e-2960.98Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MARYY     Y + +Y  L+ PPV LC+F  IL  V+GFSWYI Y+S+ ++ I QLK FL+  PL+LL+L+H LS  +PFL+PLPEQDSLHRAG SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFP
        AL+L+FLLY+IS+QS +H+RWFP
Subjt:  ALLLIFLLYLISHQSHYHQRWFP

TrEMBL top hitse value%identityAlignment
A0A061GR99 Uncharacterized protein1.7e-2958.4Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MARYY + +  Y      L+ PP+ LC F  IL  V+GFSWYI Y+S+ ++ I QLK FL+  P++LLLL+H  S  +PFL+PLPEQDSLHR G SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFPFG
        ALLL+FLLY+IS+QS +H+RWFP G
Subjt:  ALLLIFLLYLISHQSHYHQRWFPFG

A0A0A0KZ55 Uncharacterized protein1.5e-4175.59Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MAR YN +Y Y + EY  LT PP++LCVF VIL++VM FSWY FY S L++ I QLKLFLLTVPLLLLLLLHLLS G  FLLPLPEQDSLHRAG SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFPFGYR
        A+LL+F LY+ISHQSHYHQRWFPFGYR
Subjt:  ALLLIFLLYLISHQSHYHQRWFPFGYR

A0A2P5CVU8 Transmembrane protein1.1e-3162.9Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG
        MARYYNN+YSY+  +YF++   P+ LC F +IL  ++GFSWYI Y++  ++LI Q+KLFL+ VPLLLLL++H LS  GL FL+PLPEQDSLHRAG SPWG
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG

Query:  VALLLIFLLYLISHQSHYHQRWFP
        V LLL+FLL++IS+QS +H+RWFP
Subjt:  VALLLIFLLYLISHQSHYHQRWFP

A0A2P5F6Z2 Transmembrane protein2.2e-3262.9Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG
        MARYYNN+YSY+  +YF++   P+ LC F +IL  ++GFSWYI Y++  ++LI Q+KLFL+ VPLLLLL++H LS  G+PFL+PLPEQDSLHRAG SPWG
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSL-GLPFLLPLPEQDSLHRAGASPWG

Query:  VALLLIFLLYLISHQSHYHQRWFP
        V LLL+FLL++IS+QS +H+RWFP
Subjt:  VALLLIFLLYLISHQSHYHQRWFP

A0A6P5ZU06 uncharacterized protein LOC1113040263.0e-2960.98Show/hide
Query:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV
        MARYY     Y + +Y  L+ PPV LC+F  IL  V+GFSWYI Y+S+ ++ I QLK FL+  PL+LL+L+H LS  +PFL+PLPEQDSLHRAG SPWGV
Subjt:  MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGV

Query:  ALLLIFLLYLISHQSHYHQRWFP
        AL+L+FLLY+IS+QS +H+RWFP
Subjt:  ALLLIFLLYLISHQSHYHQRWFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein6.8e-1844.86Show/hide
Query:  PVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLS----LG--LPFLLPLPEQDSLHRAGASPWGVALLLIFLLYLISHQSH
        P+ LCVF +IL++ +  SWY  Y+ +++    Q KL L+  PLLLLL +H LS    +G  +  L+ L E++SL+RAG +PWGVA +L+FL +++S+QS 
Subjt:  PVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLS----LG--LPFLLPLPEQDSLHRAGASPWGVALLLIFLLYLISHQSH

Query:  YHQRWFP
        + +RWFP
Subjt:  YHQRWFP

AT5G19875.1 unknown protein1.3e-2446.55Show/hide
Query:  YYWGEYFN-LTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGVALLLIFLLY
        YY   Y + L+ P   LC   +++  V+ F+WY+ ++SI+++ +  LKL  +  PL LLLL+H  S GL F +P PEQDS+HRAG+SPWGVA +L+ +L+
Subjt:  YYWGEYFN-LTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGVALLLIFLLY

Query:  LISHQSHYHQRWFPFG
        ++S+QS + +RWFPFG
Subjt:  LISHQSHYHQRWFPFG

AT5G42146.1 unknown protein7.0e-0734.26Show/hide
Query:  PPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLL------HLLSLGLPFLLPLPEQDSLHRAGASPWGVALLLIFLLYLISHQS
        PP+ L     I+ L++  S Y  Y   +++    LKLF+L +P+L + +L      H L     + +   +  SL   G  PWGV L+LI LL L+S QS
Subjt:  PPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLL------HLLSLGLPFLLPLPEQDSLHRAGASPWGVALLLIFLLYLISHQS

Query:  HYHQRWFP
        ++H  W+P
Subjt:  HYHQRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGATACTACAACAACTGGTATTCTTATTATTGGGGGGAATACTTTAACTTGACGTTCCCTCCGGTGGAGCTGTGCGTGTTCGGGGTGATCCTGGTGCTGGTGAT
GGGCTTCTCATGGTACATCTTCTACGACTCCATTCTCCAGGAGTTGATCGTCCAGCTCAAGCTGTTCCTCCTCACCGTCCCCCTGCTTCTGCTCCTCCTCCTCCACCTCC
TCTCTCTCGGCCTCCCCTTCCTCCTCCCTCTGCCGGAGCAGGACTCCCTCCACCGCGCCGGCGCCTCCCCGTGGGGCGTCGCTCTCCTCCTCATCTTTCTTCTCTACCTC
ATCTCTCACCAGTCCCACTACCACCAACGCTGGTTCCCTTTCGGATACAGG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGATACTACAACAACTGGTATTCTTATTATTGGGGGGAATACTTTAACTTGACGTTCCCTCCGGTGGAGCTGTGCGTGTTCGGGGTGATCCTGGTGCTGGTGAT
GGGCTTCTCATGGTACATCTTCTACGACTCCATTCTCCAGGAGTTGATCGTCCAGCTCAAGCTGTTCCTCCTCACCGTCCCCCTGCTTCTGCTCCTCCTCCTCCACCTCC
TCTCTCTCGGCCTCCCCTTCCTCCTCCCTCTGCCGGAGCAGGACTCCCTCCACCGCGCCGGCGCCTCCCCGTGGGGCGTCGCTCTCCTCCTCATCTTTCTTCTCTACCTC
ATCTCTCACCAGTCCCACTACCACCAACGCTGGTTCCCTTTCGGATACAGG
Protein sequenceShow/hide protein sequence
MARYYNNWYSYYWGEYFNLTFPPVELCVFGVILVLVMGFSWYIFYDSILQELIVQLKLFLLTVPLLLLLLLHLLSLGLPFLLPLPEQDSLHRAGASPWGVALLLIFLLYL
ISHQSHYHQRWFPFGYR