; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010264 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010264
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-conjugating enzyme family protein
Genome locationscaffold391:1220384..1222624
RNA-Seq ExpressionMS010264
SyntenyMS010264
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0005975 - carbohydrate metabolic process (biological process)
GO:0010099 - regulation of photomorphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016874 - ligase activity (molecular function)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570333.1 Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9390.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQ PL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS+GNVSLDILK++WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

XP_022153725.1 constitutive photomorphogenesis protein 10 [Momordica charantia]5.0e-10498.92Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        M GNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
        YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTI KVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

XP_022943567.1 constitutive photomorphogenesis protein 10 [Cucurbita moschata]1.8e-9390.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQ PL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS+GNVSLDILK++WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

XP_038902200.1 constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida]4.6e-9491.3Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQLPL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
         PPKVVFKTRIYHCNVDSAGN SLDILK+NWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFA
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

XP_038902201.1 constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida]1.2e-9491.35Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQLPL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDSAGN SLDILK+NWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

TrEMBL top hitse value%identityAlignment
A0A1S3BMW7 constitutive photomorphogenesis protein 101.2e-9290.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+QRPQLP +GGGR SSS SLA PTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGP GTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS GNVSLDILK+NWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

A0A5D3DDP3 Constitutive photomorphogenesis protein 101.2e-9290.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+QRPQLP +GGGR SSS SLA PTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGP GTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS GNVSLDILK+NWSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

A0A6J1DHM4 constitutive photomorphogenesis protein 102.4e-10498.92Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        M GNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
        YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTI KVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

A0A6J1FTD1 constitutive photomorphogenesis protein 108.5e-9490.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQ PL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS+GNVSLDILK++WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

A0A6J1JFC7 constitutive photomorphogenesis protein 108.5e-9490.27Show/hide
Query:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF
        MVGNR+ RPQ PL GGGR SSS+SLAPPTSWASTTSVSASGKRIQREM EFN DPPS CSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDI+FP DYPF
Subjt:  MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPF

Query:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
         PPKVVFKTRIYHCNVDS+GNVSLDILK++WSPALTIAKVLIAVKSIF NPNPYDPNAPGVAHLYL DR KHDEIAAEWTLRFAK
Subjt:  YPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

SwissProt top hitse value%identityAlignment
P52483 Ubiquitin-conjugating enzyme E2 E39.2e-5360.53Show/hide
Query:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS
        +T  +S S KRIQ+E+AE   DPP +CSAGPKGDN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LDILK+NWS
Subjt:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS

Query:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        PALTI+KVL+++ S+  + NP DP    +A  YLT+R +HD IA +WT R+A
Subjt:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

Q2T9X7 Ubiquitin-conjugating enzyme E2 E39.2e-5360.53Show/hide
Query:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS
        +T  +S S KRIQ+E+AE   DPP +CSAGPKGDN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LDILK+NWS
Subjt:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS

Query:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        PALTI+KVL+++ S+  + NP DP    +A  YLT+R +HD IA +WT R+A
Subjt:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

Q969T4 Ubiquitin-conjugating enzyme E2 E39.2e-5360.53Show/hide
Query:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS
        +T  +S S KRIQ+E+AE   DPP +CSAGPKGDN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LDILK+NWS
Subjt:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS

Query:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        PALTI+KVL+++ S+  + NP DP    +A  YLT+R +HD IA +WT R+A
Subjt:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

Q96LR5 Ubiquitin-conjugating enzyme E2 E22.3e-5158.55Show/hide
Query:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS
        +   +S S KRIQ+E+AE   DPP +CSAGPKGDN+Y W +TI GPPG+ YEGG+FFLDI F  DYPF PPKV F+TRIYHCN++S G + LDILK+NWS
Subjt:  STTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWS

Query:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        PALTI+KVL+++ S+  + NP DP    +A  Y+T+R +HD +A +WT R+A
Subjt:  PALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

Q9LJD7 Constitutive photomorphogenesis protein 105.9e-6875.16Show/hide
Query:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK
        +SW + TSVSASGKRIQREMAE N DPP  CSAGPKGDNLYHW ATI GP GTPYEGGIFFLDI+FP DYPF PPK+VFKTRIYHCNVD+AG++S++IL+
Subjt:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK

Query:  ENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
        ++WSPALTI KVL A++SIF  P PY P  P +A LYLTDR KHDE+A EWTLRFAK
Subjt:  ENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

Arabidopsis top hitse value%identityAlignment
AT2G16740.1 ubiquitin-conjugating enzyme 291.0e-4653.15Show/hide
Query:  KRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVL
        +RI +E+ E   DPP  CSAGP G++++HW ATI GP  +PY GG+F ++I FP DYPF PPKVVF+T+++H N++S GN+ LDILK+ WSPALTI+KVL
Subjt:  KRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVL

Query:  IAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        +++ S+  +PNP DP  P +AH+Y TD+ K++ +A  WT ++A
Subjt:  IAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

AT3G08690.1 ubiquitin-conjugating enzyme 119.1e-4854.48Show/hide
Query:  SGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAK
        + KRI +E+ +   DPPS+CSAGP  ++++HW ATI GPP +PY GG+F + I FP DYPF PPKV FKT++YH N++S G++ LDILKE WSPALTI+K
Subjt:  SGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAK

Query:  VLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        VL+++ S+  +PNP DP  P +AH+Y TDR K++  A  WT ++A
Subjt:  VLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

AT3G08690.2 ubiquitin-conjugating enzyme 119.1e-4854.48Show/hide
Query:  SGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAK
        + KRI +E+ +   DPPS+CSAGP  ++++HW ATI GPP +PY GG+F + I FP DYPF PPKV FKT++YH N++S G++ LDILKE WSPALTI+K
Subjt:  SGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAK

Query:  VLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA
        VL+++ S+  +PNP DP  P +AH+Y TDR K++  A  WT ++A
Subjt:  VLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFA

AT3G13550.1 Ubiquitin-conjugating enzyme family protein4.2e-6975.16Show/hide
Query:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK
        +SW + TSVSASGKRIQREMAE N DPP  CSAGPKGDNLYHW ATI GP GTPYEGGIFFLDI+FP DYPF PPK+VFKTRIYHCNVD+AG++S++IL+
Subjt:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK

Query:  ENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK
        ++WSPALTI KVL A++SIF  P PY P  P +A LYLTDR KHDE+A EWTLRFAK
Subjt:  ENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK

AT3G13550.2 Ubiquitin-conjugating enzyme family protein2.2e-5476Show/hide
Query:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK
        +SW + TSVSASGKRIQREMAE N DPP  CSAGPKGDNLYHW ATI GP GTPYEGGIFFLDI+FP DYPF PPK+VFKTRIYHCNVD+AG++S++IL+
Subjt:  TSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILK

Query:  ENWSPALTIAKVLIAVKSIFENPNP
        ++WSPALTI KVL A++SIF  P P
Subjt:  ENWSPALTIAKVLIAVKSIFENPNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAAATCGAGAGCAGCGTCCGCAATTGCCTCTCGTAGGTGGGGGGCGACCGTCTTCCTCATCCTCCTTAGCACCTCCAACTTCATGGGCGTCCACAACTTCGGT
TTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGGCTGAGTTTAATTCCGACCCACCTTCCCATTGCTCCGCTGGCCCAAAGGGTGACAATCTCTACCACTGGTTCGCTA
CCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGTATATTTTTTCTTGACATACTTTTTCCATGTGATTATCCATTCTATCCTCCAAAGGTTGTATTTAAAACCCGA
ATCTACCACTGCAATGTGGATTCCGCTGGTAATGTAAGTTTGGACATTCTGAAGGAGAACTGGAGTCCAGCACTGACAATCGCAAAGGTGTTAATTGCAGTGAAGTCGAT
TTTTGAAAATCCAAACCCTTATGATCCAAACGCACCTGGCGTTGCTCACTTGTACTTAACCGATAGATGTAAGCACGACGAGATAGCTGCTGAGTGGACACTACGTTTTG
CCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAAATCGAGAGCAGCGTCCGCAATTGCCTCTCGTAGGTGGGGGGCGACCGTCTTCCTCATCCTCCTTAGCACCTCCAACTTCATGGGCGTCCACAACTTCGGT
TTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGGCTGAGTTTAATTCCGACCCACCTTCCCATTGCTCCGCTGGCCCAAAGGGTGACAATCTCTACCACTGGTTCGCTA
CCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGTATATTTTTTCTTGACATACTTTTTCCATGTGATTATCCATTCTATCCTCCAAAGGTTGTATTTAAAACCCGA
ATCTACCACTGCAATGTGGATTCCGCTGGTAATGTAAGTTTGGACATTCTGAAGGAGAACTGGAGTCCAGCACTGACAATCGCAAAGGTGTTAATTGCAGTGAAGTCGAT
TTTTGAAAATCCAAACCCTTATGATCCAAACGCACCTGGCGTTGCTCACTTGTACTTAACCGATAGATGTAAGCACGACGAGATAGCTGCTGAGTGGACACTACGTTTTG
CCAAG
Protein sequenceShow/hide protein sequence
MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTR
IYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK