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MS010272 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010272
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein FAM110A like
Genome locationscaffold391:1301130..1301537
RNA-Seq ExpressionMS010272
SyntenyMS010272
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570325.1 hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4366.23Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------
        MNQ V LRSPP TRQQPLLT++S N+  EK R AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKK WNK+  KRR I K+NKA         
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------

Query:  -QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
         +  P  D       ++ P S LSSEDVEL EK MWD+FYGTGFWRTPSQR
Subjt:  -QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

XP_022153857.1 uncharacterized protein LOC111021273 [Momordica charantia]1.1e-7199.26Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD
        MNQTVHLRSPPGTRQQPLLTEQSTNK NEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD

Query:  DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
        DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
Subjt:  DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

XP_022943329.1 uncharacterized protein LOC111448127 [Cucurbita moschata]3.6e-4367.11Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL------Q
        MNQ V LRSPP TRQQPLLT++S N+  EK R AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKK WNK+  KRR I K+NKA        +
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL------Q

Query:  HRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
          P  D       ++ P S LSSEDVEL EK MWD+FYGTGFWRTPSQR
Subjt:  HRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

XP_023512462.1 uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo]4.7e-4366.67Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------
        MNQ V LRSPP TRQQPLLT++S N+  EK R AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKK WNK+  KRR I K+NKA         
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------

Query:  QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
        +  P  D       ++ P S LSSEDVEL EK MWD+FYGTGFWRTPSQR
Subjt:  QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

XP_038901895.1 uncharacterized protein LOC120088573 [Benincasa hispida]2.7e-4367.36Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKAL--------
        MNQ+V L+SPPGTRQQPLL ++S N+  EKRR AEVAGGTAA CAAICCCFPC++MNLLILTVYK+PVGLCKKVWNK+  KRR+IAKKN A         
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKAL--------

Query:  LQHRPPADDTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
         +     + + P S  SSED+EL EK MW+RFYGTGFWRTPSQR
Subjt:  LQHRPPADDTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

TrEMBL top hitse value%identityAlignment
A0A0A0L1Q3 Uncharacterized protein6.0e-4468.03Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD
        MNQ V LRSPPGTRQQPLL ++S N+  EKRR AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKKVWNK+  KRR IAKKN          +
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD

Query:  D-----------TFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
        D           + P S LSSED+EL EK MW+RFYGTGFWRTPSQR
Subjt:  D-----------TFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

A0A5D3DDP5 Uncharacterized protein2.5e-4266.44Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------
        MNQ V LRSPPGTRQQPLL ++S N+  EKRR AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKKVWNK+  KRR IAKKN   +       
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------

Query:  ---QHRPPADDTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
           + +    ++ P S LSSED+EL EK MW+RFYG GF RTPSQR
Subjt:  ---QHRPPADDTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

A0A6J1DK41 uncharacterized protein LOC1110212735.2e-7299.26Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD
        MNQTVHLRSPPGTRQQPLLTEQSTNK NEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPAD

Query:  DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
        DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
Subjt:  DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

A0A6J1FTZ9 uncharacterized protein LOC1114481271.7e-4367.11Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL------Q
        MNQ V LRSPP TRQQPLLT++S N+  EK R AEVAGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKK WNK+  KRR I K+NKA        +
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL------Q

Query:  HRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
          P  D       ++ P S LSSEDVEL EK MWD+FYGTGFWRTPSQR
Subjt:  HRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

A0A6J1JA30 uncharacterized protein LOC1114839381.1e-4264.71Show/hide
Query:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------
        MNQ V LRSPP TRQQPLLT++S N+  EK R AE+AGGTAAECAAICCCFPC++MNLLILTVYK+PVGLCKK WN++  KRR I KKNKA         
Subjt:  MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-------

Query:  ---QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR
           +  P  D       ++ P S LSSEDVEL EK MWD+FYGTGFWRTPSQR
Subjt:  ---QHRPPAD-------DTFPPSCLSSEDVELEEKIMWDRFYGTGFWRTPSQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein8.3e-2239.19Show/hide
Query:  SPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-QHRPPADDTFPPSC
        SPP T          T+ + E+R++ EVAGG AAECAA+ CC PC ++NL++L VYK+P  +CKK W +  +KRRR  +K   LL        ++   + 
Subjt:  SPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALL-QHRPPADDTFPPSC

Query:  LSSEDVELE-------------------EKIMWDRFYGTGFWRTPSQR
        L+ ED+  E                   E  M DRFYG GFWR+PSQ+
Subjt:  LSSEDVELE-------------------EKIMWDRFYGTGFWRTPSQR

AT3G11690.1 unknown protein6.4e-1431.98Show/hide
Query:  RQQPL----LTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAK--------------------KN
        R+QPL    L+  S   +      AE  GGT A CAA+ CC PC L+NLL+L +YK+P G+C++    +  +R+++ K                    +N
Subjt:  RQQPL----LTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAK--------------------KN

Query:  KALLQHRPPADDT----------------------FPPSCLSSEDVELE---EKIMWDRFYGTGFWRTPSQR
             H   +DD                       F     + ED E     EK MW+RFYG GFWR+PSQR
Subjt:  KALLQHRPPADDT----------------------FPPSCLSSEDVELE---EKIMWDRFYGTGFWRTPSQR

AT5G06380.1 unknown protein3.0e-1641.74Show/hide
Query:  AEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKN--KALLQHRPPADDTFPPSCLSSEDVELE-----------EKIM
        AE  GGT A CAA+C C PC+++NL++L VYKLP GLC++   +   +R+R+AKK   ++  +        F    L S D E E           EK M
Subjt:  AEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKN--KALLQHRPPADDTFPPSCLSSEDVELE-----------EKIM

Query:  WDRFYGTGFWRTPSQ
        W RFY  GFWR+ SQ
Subjt:  WDRFYGTGFWRTPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGACCGTCCACCTCCGATCACCGCCGGGGACTCGCCAGCAGCCGCTGCTTACAGAACAGTCGACCAACAAAAATAACGAAAAGCGGCGGCTGGCGGAGGTGGC
AGGCGGAACGGCGGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCACCCTTATGAACCTTCTCATATTGACCGTCTACAAACTTCCAGTGGGGCTCTGCAAAAAGG
TGTGGAACAAGAAACTGGCTAAACGACGCCGCATCGCTAAGAAAAACAAGGCCCTGTTGCAGCACAGGCCGCCGGCCGACGACACGTTTCCGCCGTCGTGTCTGTCGTCG
GAGGACGTGGAATTGGAGGAGAAGATCATGTGGGACCGATTCTACGGGACAGGCTTCTGGAGGACACCGTCTCAGAGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGACCGTCCACCTCCGATCACCGCCGGGGACTCGCCAGCAGCCGCTGCTTACAGAACAGTCGACCAACAAAAATAACGAAAAGCGGCGGCTGGCGGAGGTGGC
AGGCGGAACGGCGGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCACCCTTATGAACCTTCTCATATTGACCGTCTACAAACTTCCAGTGGGGCTCTGCAAAAAGG
TGTGGAACAAGAAACTGGCTAAACGACGCCGCATCGCTAAGAAAAACAAGGCCCTGTTGCAGCACAGGCCGCCGGCCGACGACACGTTTCCGCCGTCGTGTCTGTCGTCG
GAGGACGTGGAATTGGAGGAGAAGATCATGTGGGACCGATTCTACGGGACAGGCTTCTGGAGGACACCGTCTCAGAGA
Protein sequenceShow/hide protein sequence
MNQTVHLRSPPGTRQQPLLTEQSTNKNNEKRRLAEVAGGTAAECAAICCCFPCTLMNLLILTVYKLPVGLCKKVWNKKLAKRRRIAKKNKALLQHRPPADDTFPPSCLSS
EDVELEEKIMWDRFYGTGFWRTPSQR