CuGenDBv2

Gene ID	MS010281
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	scaffold391:1359570..1363145
RNA-Seq Expression	MS010281
Synteny	MS010281
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022153726.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia]

2.2e-173

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

XP_022153728.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia]

9.9e-174

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQR
        RVTRSSARQR
Subjt:  RVTRSSARQR

XP_022153729.1 non-structural maintenance of chromosomes element 1 homolog isoform X3 [Momordica charantia]

9.9e-174

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQR
        RVTRSSARQR
Subjt:  RVTRSSARQR

XP_022995422.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima]

3.0e-154

88.57

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQR
        PP+TRR+TRSSA QR
Subjt:  PPETRRVTRSSARQR

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

3.0e-154

88.57

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQR
        PP+TRR+TRSSA QR
Subjt:  PPETRRVTRSSARQR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

4.8e-174

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQR
        RVTRSSARQR
Subjt:  RVTRSSARQR

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

4.8e-174

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQR
        RVTRSSARQR
Subjt:  RVTRSSARQR

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

1.1e-173

99.68

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

1.5e-154

88.57

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQR
        PP+TRR+TRSSA QR
Subjt:  PPETRRVTRSSARQR

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

1.5e-154

88.57

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQR
        PP+TRR+TRSSA QR
Subjt:  PPETRRVTRSSARQR

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

5.7e-07

22.17

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Query:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP
        ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I+ L+L  E Q   M  +       
Subjt:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP

Query:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCG
                  E+ +    QD+WL    +G   L  R  ++L  +      D+   C VC++  ++ +LC+N  C + +H  C   +    ++   CP C 
Subjt:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCG

Query:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ
          W   + ++            +QG S SQ
Subjt:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.0e-08

22.86

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Query:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC
        DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L  E Q   M  +                 E+ +    Q++WL  
Subjt:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC

Query:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG
          +G   L  R  ++L  + R    D+   C VC +  ++++LC+N  C + +H  C  K    K +   CP C   W   + ++     +     +T+ 
Subjt:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG

Query:  QSSSQRRKKS
             +R K+
Subjt:  QSSSQRRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

1.4e-96

55.91

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E +FH +FT +TG++P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +AQG IS+  AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPP
        CNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C GCG  W  S +T  E+ EE   DE +  TQ  +   +R++ + +   +  S  + AS    
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPP

Query:  ETRRVTRSSARQR
         TRRVTRS    R
Subjt:  ETRRVTRSSARQR

Sequences

Show/hide sequences

CDS sequence

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ATGCGAGAGCTGAGTTGGAGACATCATACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAG
CCCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTG
TTTATTATGGCTTGGTCAATAACGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAA
GATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTT
CAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTC
TTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTA
CATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAATGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGA
AGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCC
AACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGCCAGAGG

mRNA sequence

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Protein sequence

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MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRV
HQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR

MS010281 (gene) of Bitter gourd (TR) v1 genome