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MS010294 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010294
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGamma-tubulin complex component
Genome locationscaffold391:1430230..1430403
RNA-Seq ExpressionMS010294
SyntenyMS010294
Gene Ontology termsGO:0000278 - mitotic cell cycle (biological process)
GO:0007020 - microtubule nucleation (biological process)
GO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0051225 - spindle assembly (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0000922 - spindle pole (cellular component)
GO:0000923 - equatorial microtubule organizing center (cellular component)
GO:0000930 - gamma-tubulin complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0043015 - gamma-tubulin binding (molecular function)
GO:0051011 - microtubule minus-end binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605845.1 Gamma-tubulin complex component 6, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1887.27Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSEET SVAGIINQILQCALDLRCCFTGD WN QVD AA SRRLS INKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
XP_022153771.1 uncharacterized protein LOC111021210 isoform X1 [Momordica charantia]2.3e-2396.36Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSE+TQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
XP_022153772.1 uncharacterized protein LOC111021210 isoform X2 [Momordica charantia]2.3e-2396.36Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSE+TQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
XP_022958553.1 uncharacterized protein LOC111459753 isoform X1 [Cucurbita moschata]3.8e-1887.27Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSEET SVAGIINQILQCALDLRCCFTGD WN QVD AA SRRLS INKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
XP_023533555.1 uncharacterized protein LOC111795389 isoform X1 [Cucurbita pepo subsp. pepo]3.8e-1887.27Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSEET SVAGIINQILQCALDLRCCFTGD WN QVD AA SRRLS INKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
TrEMBL top hitse value%identityAlignment
A0A0A0L630 Uncharacterized protein9.1e-1879.31Show/hide
Query:  RCFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVICT
        RCFLSEETQSVA  INQ+LQCALDLRCCFTGD WN QVD AA SRRLS INK+Q  C+
Subjt:  RCFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVICT
A0A6J1DJV5 uncharacterized protein LOC111021210 isoform X21.1e-2396.36Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSE+TQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
A0A6J1DLQ0 uncharacterized protein LOC111021210 isoform X11.1e-2396.36Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSE+TQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
A0A6J1H3E0 uncharacterized protein LOC111459753 isoform X11.8e-1887.27Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSEET SVAGIINQILQCALDLRCCFTGD WN QVD AA SRRLS INKSQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
A0A6J1K7L9 uncharacterized protein LOC111490907 isoform X11.2e-1785.45Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLSEET SVAGIINQILQCALDLRCCFTGD WN QVD AA SRRLS INKS V+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G43610.1 Spc97 / Spc98 family of spindle pole body (SBP) component4.6e-0646.43Show/hide
Query:  CFLSEETQSVAGIINQILQCALDLRCCF-TGDTWNPQVDKAAFSRRLSWINKSQVI
        CFLS+ETQ ++ II  ILQCALD R C   G     +V   ++++ L  IN SQV+
Subjt:  CFLSEETQSVAGIINQILQCALDLRCCF-TGDTWNPQVDKAAFSRRLSWINKSQVI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATGTTTCCTGTCTGAAGAAACACAATCCGTGGCTGGTATCATTAATCAAATCTTGCAATGTGCTCTAGATCTCCGATGTTGTTTTACTGGTGATACGTGGAATCCTCA
AGTTGATAAAGCAGCTTTTTCGAGGAGACTTTCTTGGATCAACAAGTCCCAGGTAATCTGCACT
mRNA sequenceShow/hide mRNA sequence
AGATGTTTCCTGTCTGAAGAAACACAATCCGTGGCTGGTATCATTAATCAAATCTTGCAATGTGCTCTAGATCTCCGATGTTGTTTTACTGGTGATACGTGGAATCCTCA
AGTTGATAAAGCAGCTTTTTCGAGGAGACTTTCTTGGATCAACAAGTCCCAGGTAATCTGCACT
Protein sequenceShow/hide protein sequence
RCFLSEETQSVAGIINQILQCALDLRCCFTGDTWNPQVDKAAFSRRLSWINKSQVICT