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MS010302 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010302
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Genome locationscaffold878:8668..8886
RNA-Seq ExpressionMS010302
SyntenyMS010302
Gene Ontology termsGO:0098542 - defense response to other organism (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
InterPro domainsIPR044839 - Protein NDR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650206.1 hypothetical protein Csa_011664 [Cucumis sativus]1.6e-2691.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

XP_004133755.1 NDR1/HIN1-like protein 12 [Cucumis sativus]1.6e-2691.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

XP_008437747.1 PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo]2.1e-2691.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

XP_022146145.1 NDR1/HIN1-like protein 12 [Momordica charantia]2.7e-2998.63Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLLMIGVVALILWLVYRPTDPQFTVV AAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

XP_038899063.1 NDR1/HIN1-like protein 12 [Benincasa hispida]1.8e-2590.41Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP  PQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRL AFVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

TrEMBL top hitse value%identityAlignment
A0A0A0L882 LEA_2 domain-containing protein7.9e-2791.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

A0A1S3AVC7 NDR1/HIN1-like protein 121.0e-2691.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

A0A5D3DAX9 NDR1/HIN1-like protein 121.0e-2691.78Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRP DPQFTVVGAAIYDLNMSS PLLSTTMQFTI+TRNPNRRVSIYYDRLT FVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

A0A6J1CWG5 NDR1/HIN1-like protein 121.3e-2998.63Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLLMIGVVALILWLVYRPTDPQFTVV AAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

A0A6J1IDR9 NDR1/HIN1-like protein 12.8e-2486.3Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISIFLL+IGVVAL LWLVYRPT PQF VVGAAIY+LN+SS PLLST MQFTI+TRNPNRRV IYYDRLTAFVS
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

SwissProt top hitse value%identityAlignment
Q9FI03 NDR1/HIN1-like protein 261.0e-0736.49Show/hide
Query:  SIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNM--SSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        S F   + ++  ++WL+  P  P+F++  A IY LN+  SS  LL++++Q T+ ++NPN++V IYYD+L  + +
Subjt:  SIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNM--SSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

Q9FNH6 NDR1/HIN1-like protein 31.7e-0533.33Show/hide
Query:  LMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRL
        +++G+ ALI+WL++RP   +F V  A + +  +     L   +      RNPNRR+ +YYD +
Subjt:  LMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRL

Q9SJ52 NDR1/HIN1-like protein 102.6e-0638.81Show/hide
Query:  LLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPP-LLSTTMQFTIITRNPNRRVSIYYDRLTA
        ++++GV ALI WL+ RP   +F V  A++   + +SP  +L   +  T+  RNPN+R+ +YYDR+ A
Subjt:  LLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPP-LLSTTMQFTIITRNPNRRVSIYYDRLTA

Q9SJ54 NDR1/HIN1-like protein 121.4e-0937.14Show/hide
Query:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        F++++ +   ++W++ +PT P+F +  A +Y  N+S P LL++  Q TI +RN N R+ IYYDRL  + +
Subjt:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

Q9SRN0 NDR1/HIN1-like protein 12.3e-0736Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSS--PPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        I   L +I +  L++W + +P+ P+F +  A +Y  N+S   P LL++  Q T+ +RNPN ++ IYYDRL  + +
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSS--PPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

Arabidopsis top hitse value%identityAlignment
AT2G35960.1 NDR1/HIN1-like 121.0e-1037.14Show/hide
Query:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        F++++ +   ++W++ +PT P+F +  A +Y  N+S P LL++  Q TI +RN N R+ IYYDRL  + +
Subjt:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

AT3G44220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family5.6e-0937.14Show/hide
Query:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        FL  +  V  ++W +  P  P+F +  A IY  N+S P  L++ +Q T+ +RNPN ++ I+YDRL  + S
Subjt:  FLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.1e-1138.36Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        I  F++++ +   ++W++ RPT P+F +  A +Y  N+S P LL++  Q TI +RNPN ++ IYYDRL  + +
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.7e-2161.64Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        I   L+++G++ALILWLVYRP  P+ TVVGAAIYDLN ++PPL+ST++QF+++ RNPNRRVSI+YD+L+ +V+
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS

AT5G06330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family9.3e-1244Show/hide
Query:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSS--PPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS
        ISI LL+I VV L++W + +P+ P+F +  A +++ N+S   P LL++  QFT+ +RNPN ++ IYYDRL  + S
Subjt:  ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSS--PPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTCCATCTTCCTTCTCATGATCGGTGTCGTGGCTCTCATCCTCTGGCTTGTCTACCGCCCCACTGACCCCCAATTTACGGTGGTCGGTGCCGCCATATACGACCTCAA
CATGTCATCTCCGCCGTTGCTGTCCACAACTATGCAGTTCACCATCATTACAAGGAACCCGAACAGGCGAGTTTCAATTTATTATGATAGACTGACTGCCTTCGTATCG
mRNA sequenceShow/hide mRNA sequence
ATCTCCATCTTCCTTCTCATGATCGGTGTCGTGGCTCTCATCCTCTGGCTTGTCTACCGCCCCACTGACCCCCAATTTACGGTGGTCGGTGCCGCCATATACGACCTCAA
CATGTCATCTCCGCCGTTGCTGTCCACAACTATGCAGTTCACCATCATTACAAGGAACCCGAACAGGCGAGTTTCAATTTATTATGATAGACTGACTGCCTTCGTATCG
Protein sequenceShow/hide protein sequence
ISIFLLMIGVVALILWLVYRPTDPQFTVVGAAIYDLNMSSPPLLSTTMQFTIITRNPNRRVSIYYDRLTAFVS