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MS010305 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010305
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein arv1 homolog
Genome locationscaffold878:49224..49400
RNA-Seq ExpressionMS010305
SyntenyMS010305
Gene Ontology termsGO:0032366 - intracellular sterol transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144295.1 protein arv1 homolog [Momordica charantia]2.6e-2298.31Show/hide
Query:  GKGKEPSSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        GKGKEPSSASGR+LKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
Subjt:  GKGKEPSSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

XP_022153077.1 uncharacterized protein LOC111020667 isoform X1 [Momordica charantia]1.8e-1586.79Show/hide
Query:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        S+  G KLKNNNNSD  ELEDKKELIKTGEMVSQISHSCLSDPDPNFN+TKSE
Subjt:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

XP_022153078.1 uncharacterized protein LOC111020667 isoform X2 [Momordica charantia]1.8e-1586.79Show/hide
Query:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        S+  G KLKNNNNSD  ELEDKKELIKTGEMVSQISHSCLSDPDPNFN+TKSE
Subjt:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

XP_038900292.1 uncharacterized protein At5g41620 isoform X1 [Benincasa hispida]1.5e-0662.12Show/hide
Query:  GKGKEPS-SASGRKLKNN------NNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        GKGKE S S S RK   N      NNSDV  +E+KKEL+KT EMVSQISHSCLSDPD +  +TK+E
Subjt:  GKGKEPS-SASGRKLKNN------NNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

XP_038900293.1 uncharacterized protein At5g41620 isoform X2 [Benincasa hispida]1.5e-0662.12Show/hide
Query:  GKGKEPS-SASGRKLKNN------NNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        GKGKE S S S RK   N      NNSDV  +E+KKEL+KT EMVSQISHSCLSDPD +  +TK+E
Subjt:  GKGKEPS-SASGRKLKNN------NNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

TrEMBL top hitse value%identityAlignment
A0A6J1CR90 protein arv1 homolog1.2e-2298.31Show/hide
Query:  GKGKEPSSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        GKGKEPSSASGR+LKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
Subjt:  GKGKEPSSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

A0A6J1DGK1 uncharacterized protein LOC111020667 isoform X28.7e-1686.79Show/hide
Query:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        S+  G KLKNNNNSD  ELEDKKELIKTGEMVSQISHSCLSDPDPNFN+TKSE
Subjt:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

A0A6J1DHY9 uncharacterized protein LOC111020667 isoform X18.7e-1686.79Show/hide
Query:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        S+  G KLKNNNNSD  ELEDKKELIKTGEMVSQISHSCLSDPDPNFN+TKSE
Subjt:  SSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

A0A6J1K0X3 uncharacterized protein LOC111490718 isoform X16.2e-0655.38Show/hide
Query:  KGKEPS-------SASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        KGKE S       SA     K  NN D+  +EDK+EL+KT + VSQISHSCLSDPDP FND+ S+
Subjt:  KGKEPS-------SASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

A0A6J1K315 uncharacterized protein LOC111490718 isoform X26.2e-0655.38Show/hide
Query:  KGKEPS-------SASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE
        KGKE S       SA     K  NN D+  +EDK+EL+KT + VSQISHSCLSDPDP FND+ S+
Subjt:  KGKEPS-------SASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAAAGGGAAAGAACCGTCGTCCGCTTCGGGCCGGAAATTGAAGAACAACAACAATTCAGATGTTGCTGAACTTGAAGATAAGAAAGAGCTGATCAAAACCGGGGAAAT
GGTTTCTCAGATATCGCATTCGTGTTTATCAGATCCGGATCCGAATTTCAACGACACGAAATCTGAG
mRNA sequenceShow/hide mRNA sequence
GGAAAAGGGAAAGAACCGTCGTCCGCTTCGGGCCGGAAATTGAAGAACAACAACAATTCAGATGTTGCTGAACTTGAAGATAAGAAAGAGCTGATCAAAACCGGGGAAAT
GGTTTCTCAGATATCGCATTCGTGTTTATCAGATCCGGATCCGAATTTCAACGACACGAAATCTGAG
Protein sequenceShow/hide protein sequence
GKGKEPSSASGRKLKNNNNSDVAELEDKKELIKTGEMVSQISHSCLSDPDPNFNDTKSE