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MS010312 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010312
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNucleoside diphosphate kinase
Genome locationscaffold878:80485..80925
RNA-Seq ExpressionMS010312
SyntenyMS010312
Gene Ontology termsGO:0006165 - nucleoside diphosphate phosphorylation (biological process)
GO:0006183 - GTP biosynthetic process (biological process)
GO:0006228 - UTP biosynthetic process (biological process)
GO:0006241 - CTP biosynthetic process (biological process)
GO:0004550 - nucleoside diphosphate kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR001564 - Nucleoside diphosphate kinase
IPR023005 - Nucleoside diphosphate kinase, active site
IPR034907 - Nucleoside diphosphate kinase-like domain
IPR036850 - Nucleoside diphosphate kinase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGC13076.1 nucleotide diphosphate kinases 1 [Cucurbita maxima]1.1e-5694.78Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP +SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF E
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

XP_004133759.1 nucleoside diphosphate kinase [Cucumis sativus]9.7e-5896.52Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

XP_008437761.1 PREDICTED: nucleoside diphosphate kinase [Cucumis melo]4.4e-5896.52Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

XP_022152788.1 nucleoside diphosphate kinase [Momordica charantia]7.9e-60100Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPVSWQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

XP_038897694.1 nucleoside diphosphate kinase [Benincasa hispida]2.8e-5795.65Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP +SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

TrEMBL top hitse value%identityAlignment
A0A0A0L5L2 Nucleoside diphosphate kinase4.7e-5896.52Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

A0A1S3AVC6 Nucleoside diphosphate kinase2.1e-5896.52Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

A0A5A7TZ01 Nucleoside diphosphate kinase2.1e-5896.52Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPV+SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

A0A6J1DFU3 Nucleoside diphosphate kinase3.8e-60100Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPVSWQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

A0A6J1IFQ6 Nucleoside diphosphate kinase5.2e-5794.78Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK MSVDRAFAENHY+DLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKP +SDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF E
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

SwissProt top hitse value%identityAlignment
O81372 Nucleoside diphosphate kinase 18.3e-5280.7Show/hide
Query:  LKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEG
        LKF++VDR FAE HYADL+ KPFFNGL+EYI+SGPVVAM+WEGK VV TGRKIIGAT P+ S+ GTIRGDFAID+GRN+IHGSD+VESA KEIALWFPEG
Subjt:  LKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEG

Query:  PVSWQSSLHSWIYE
         V+WQSSLHSWIYE
Subjt:  PVSWQSSLHSWIYE

P47920 Nucleoside diphosphate kinase B8.3e-5280Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK ++VD+AFAE HYADL+ KPFFNGL+EYIISGPVVAM+WEGKNVV TGRKIIGAT P ES  GTIRGDFAID+GRN+IHGSD+VESA+KEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        G  +W SSLH WIYE
Subjt:  GPVSWQSSLHSWIYE

P47921 Nucleoside diphosphate kinase (Fragment)6.3e-5281.74Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK ++VDRAFAE HYADL+ KPFFNGL+EYI+SGPVVAM+WEGK VVATGRKIIGAT P+ES  GTIRGDFAID+GRN+IHGSD+VESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        G   WQSSLHS IYE
Subjt:  GPVSWQSSLHSWIYE

P47922 Nucleoside diphosphate kinase 12.2e-5280Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLKF++V+RAFAE HYADL+ KPFF+GL++YIISGPVVAMIWEGKNVV TGRKIIGAT P +S+ GTIRGDFAID+GRN+IHGSD+VESA KEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        G  +W+SSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

Q56E62 Nucleoside diphosphate kinase 16.3e-5280Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK ++VDRAFAE HY+DL+ KPFFNGL++YIISGPVVAM+WEGK VV TGRKIIGAT P+ES  GTIRGD+AID+GRN+IHGSD+VESARKEIALWFPE
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        G   WQSSLHSWIYE
Subjt:  GPVSWQSSLHSWIYE

Arabidopsis top hitse value%identityAlignment
AT4G09320.1 Nucleoside diphosphate kinase family protein5.0e-5277.39Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK +SV+R+FAE HY DL+ K FF+GL++YI+SGPVVAMIWEGKNVV TGRKIIGAT P  S+ GTIRGDFAID+GRN+IHGSDSVESARKEIALWFP+
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPVSWQSSLHSWIYE
        GPV+WQSS+H W+YE
Subjt:  GPVSWQSSLHSWIYE

AT4G11010.1 nucleoside diphosphate kinase 31.8e-3354.78Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P
        G+K +   + FA+ HY DL  +PFFNGL +++ SGPV+AM+WEG  V+  GRK+IGAT P +S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF P
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P

Query:  EGPVSWQSSLHSWIY
        +  VS+ S+   W+Y
Subjt:  EGPVSWQSSLHSWIY

AT4G23895.3 Pleckstrin homology (PH) domain-containing protein9.4e-3558.26Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P
        G+K M   + FA+ HY DL  +PFFNGL  ++ SGPVVAM+WEG+ V+  GRK+IGAT P +S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF P
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P

Query:  EGPVSWQSSLHSWIY
        E  VS+ S+   WIY
Subjt:  EGPVSWQSSLHSWIY

AT4G23900.1 Nucleoside diphosphate kinase family protein9.4e-3558.26Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P
        G+K M   + FA+ HY DL  +PFFNGL  ++ SGPVVAM+WEG+ V+  GRK+IGAT P +S+ GTIRGD A+ VGRNIIHGSD  E+A+ EI+LWF P
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWF-P

Query:  EGPVSWQSSLHSWIY
        E  VS+ S+   WIY
Subjt:  EGPVSWQSSLHSWIY

AT5G63310.1 nucleoside diphosphate kinase 21.0e-3355.17Show/hide
Query:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE
        GLK     +  AE HY DL+ K FF  LIEYI SGPVV M WEG  VVA+ RK+IG T P++++ GTIRGD A+  GRNI+HGSDS E+ ++EI LWF E
Subjt:  GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPE

Query:  GPV-SWQSSLHSWIYE
        G +  W S+L +W+ E
Subjt:  GPV-SWQSSLHSWIYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCTTGAAGTTTATGTCTGTGGACCGTGCTTTTGCTGAGAACCATTACGCTGATCTTGCTGGAAAGCCCTTTTTCAATGGGTTGATTGAGTACATAATTTCTGGCCCCGT
TGTGGCCATGATCTGGGAGGGGAAGAATGTTGTGGCAACTGGTAGGAAGATCATTGGAGCCACGAAGCCAGTAGAATCTGACGTAGGAACCATCCGTGGTGACTTTGCAA
TTGATGTTGGGAGGAACATCATTCATGGAAGTGATTCGGTGGAGAGTGCGAGGAAGGAAATTGCTCTTTGGTTCCCGGAGGGTCCTGTTAGCTGGCAGAGCAGCCTTCAT
TCCTGGATCTACGAG
mRNA sequenceShow/hide mRNA sequence
GGCTTGAAGTTTATGTCTGTGGACCGTGCTTTTGCTGAGAACCATTACGCTGATCTTGCTGGAAAGCCCTTTTTCAATGGGTTGATTGAGTACATAATTTCTGGCCCCGT
TGTGGCCATGATCTGGGAGGGGAAGAATGTTGTGGCAACTGGTAGGAAGATCATTGGAGCCACGAAGCCAGTAGAATCTGACGTAGGAACCATCCGTGGTGACTTTGCAA
TTGATGTTGGGAGGAACATCATTCATGGAAGTGATTCGGTGGAGAGTGCGAGGAAGGAAATTGCTCTTTGGTTCCCGGAGGGTCCTGTTAGCTGGCAGAGCAGCCTTCAT
TCCTGGATCTACGAG
Protein sequenceShow/hide protein sequence
GLKFMSVDRAFAENHYADLAGKPFFNGLIEYIISGPVVAMIWEGKNVVATGRKIIGATKPVESDVGTIRGDFAIDVGRNIIHGSDSVESARKEIALWFPEGPVSWQSSLH
SWIYE