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MS010313 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010313
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionethylene-responsive transcription factor 14-like
Genome locationscaffold878:82702..83139
RNA-Seq ExpressionMS010313
SyntenyMS010313
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597005.1 Ethylene-responsive transcription factor 13, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2958.21Show/hide
Query:  SSGDWDLLEWIREHLLEEKMDPD---PDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        SS +  LLEWIR HLLE+++D          S  +++  ++ E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSGDWDLLEWIREHLLEEKMDPD---PDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR

XP_022151925.1 ethylene-responsive transcription factor 14-like [Momordica charantia]1.0e-7598.65Show/hide
Query:  MSSGDWDLLEWIREHLLEEKMDPDPDPAAS--NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        MSSGDWDLLEWIREHLLEEKMDPDPDPAAS  NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
Subjt:  MSSGDWDLLEWIREHLLEEKMDPDPDPAAS--NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR
        AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR

XP_022950239.1 ethylene-responsive transcription factor 1-like [Cucurbita moschata]8.3e-3058.96Show/hide
Query:  SSGDWDLLEWIREHLLEEKMD---PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        SS +  LLEWIR HLLE+++D          S A+++  ++ E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSGDWDLLEWIREHLLEEKMD---PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR

XP_023539438.1 ethylene-responsive transcription factor 13-like [Cucurbita pepo subsp. pepo]1.1e-2958.21Show/hide
Query:  SSGDWDLLEWIREHLLEEKMDPD---PDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        SS +  LLEWIR HLLE+++D          S  + +  +++E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSGDWDLLEWIREHLLEEKMDPD---PDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR

XP_038907088.1 ethylene-responsive transcription factor 13-like [Benincasa hispida]1.8e-3258.39Show/hide
Query:  DLLEWIREHLLEEKM------DPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAA
        D+LE IR+HLLEE        D D   ++S  + + +  +      +E GV + QFKGVRRRPWGKYA EIRDP R GARTWLGTF TA+DAALAYDRAA
Subjt:  DLLEWIREHLLEEKM------DPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAA

Query:  FKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPT---HQTSTSQRR
        F++RGAKAKLNFPHLIDS+S   +    + KRPR PT   HQTS S+RR
Subjt:  FKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPT---HQTSTSQRR

TrEMBL top hitse value%identityAlignment
A0A1S3AZ89 ethylene-responsive transcription factor 13-like2.0e-2956.39Show/hide
Query:  DLLEWIREHLLEEKMDPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGA
        D+LE IR+HLL+E ++   D        + +    +          V++FKGVRRRPWGKYAAEIRDP R GARTWLGTF TA++AALAYDRAAFK+RGA
Subjt:  DLLEWIREHLLEEKMDPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGA

Query:  KAKLNFPHLIDS-NSQPQSLACNTNKRPRFPTH
        KAKLNFPHLIDS ++   S + ++ KRP  PTH
Subjt:  KAKLNFPHLIDS-NSQPQSLACNTNKRPRFPTH

A0A5A7TYW8 Ethylene-responsive transcription factor 13-like2.0e-2956.39Show/hide
Query:  DLLEWIREHLLEEKMDPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGA
        D+LE IR+HLL+E ++   D        + +    +          V++FKGVRRRPWGKYAAEIRDP R GARTWLGTF TA++AALAYDRAAFK+RGA
Subjt:  DLLEWIREHLLEEKMDPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGA

Query:  KAKLNFPHLIDS-NSQPQSLACNTNKRPRFPTH
        KAKLNFPHLIDS ++   S + ++ KRP  PTH
Subjt:  KAKLNFPHLIDS-NSQPQSLACNTNKRPRFPTH

A0A6J1DCJ3 ethylene-responsive transcription factor 14-like4.9e-7698.65Show/hide
Query:  MSSGDWDLLEWIREHLLEEKMDPDPDPAAS--NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        MSSGDWDLLEWIREHLLEEKMDPDPDPAAS  NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
Subjt:  MSSGDWDLLEWIREHLLEEKMDPDPDPAAS--NANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR
        AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR

A0A6J1GF81 ethylene-responsive transcription factor 1-like4.0e-3058.96Show/hide
Query:  SSGDWDLLEWIREHLLEEKMD---PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        SS +  LLEWIR HLLE+++D          S A+++  ++ E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSGDWDLLEWIREHLLEEKMD---PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR

A0A6J1IH30 ethylene-responsive transcription factor 13-like9.0e-3057.46Show/hide
Query:  SSGDWDLLEWIREHLLEEKMDPDPDPAASNANANAN---SNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR
        SS +  LLEWIR HLLE+++D       +  +  +    ++ E  GKGS   +   QF+GVRRRPWGKYAAEIRDPNRKGAR WLGT+ TAE+AALAYDR
Subjt:  SSGDWDLLEWIREHLLEEKMDPDPDPAASNANANAN---SNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDR

Query:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR
        AAF+MRGAKAKLNFPH+I S      + C   KR
Subjt:  AAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI53.3e-2158.24Show/hide
Query:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFP-HLIDSNSQPQSLACNTNKRPRFPTHQTSTS
        ++++GVRRRPWGKYAAEIRD  R GAR WLGTF TAE+AALAYDRAAF+MRGAKA LNFP  +++++     L+  +N    + T+  S S
Subjt:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFP-HLIDSNSQPQSLACNTNKRPRFPTHQTSTS

O80338 Ethylene-responsive transcription factor 24.3e-2154.64Show/hide
Query:  SELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTS
        +E  V  + ++GVR+RPWGK+AAEIRDP + GAR WLGTF TAEDAALAYD AAF+MRG++A LNFP  ++S  +P  +   T+KR    +  +S+S
Subjt:  SELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTS

P93822 Ethylene-responsive transcription factor 143.3e-2157.61Show/hide
Query:  NSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTN
        +S  GG G+E G    +++GVRRRPWGKYAAEIRD  + G R WLGTF TAEDAA AYDRAA+ MRG  A LNFPH  +  +   S A N++
Subjt:  NSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTN

Q40476 Ethylene-responsive transcription factor 15.6e-2151.55Show/hide
Query:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR----PRFPTHQTSTSQRR
        + ++GVRRRPWGK+AAEIRDP + GAR WLGT+ T E+AA+AYD+AA++MRG+KA LNFPH I  N +P+ +     +R    P   +  +S  +RR
Subjt:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKR----PRFPTHQTSTSQRR

Q8L9K1 Ethylene-responsive transcription factor 135.4e-2458.33Show/hide
Query:  PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDS
        P   P  S A  N    ++  G  +    G+ Q++GVRRRPWGK+AAEIRDP + GAR WLGT+ T EDAA+AYDRAAF++RG+KAKLNFPHLI S
Subjt:  PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDS

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.3e-2257.61Show/hide
Query:  NSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTN
        +S  GG G+E G    +++GVRRRPWGKYAAEIRD  + G R WLGTF TAEDAA AYDRAA+ MRG  A LNFPH  +  +   S A N++
Subjt:  NSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTN

AT2G44840.1 ethylene-responsive element binding factor 133.9e-2558.33Show/hide
Query:  PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDS
        P   P  S A  N    ++  G  +    G+ Q++GVRRRPWGK+AAEIRDP + GAR WLGT+ T EDAA+AYDRAAF++RG+KAKLNFPHLI S
Subjt:  PDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDS

AT3G23220.1 Integrase-type DNA-binding superfamily protein1.5e-2176.67Show/hide
Query:  QFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPH
        +++GVR+RPWGKYAAEIRD  R GAR WLGTF+TAEDAA AYDRAAF MRG +A LNFPH
Subjt:  QFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPH

AT4G17500.1 ethylene responsive element binding factor 11.2e-2151.61Show/hide
Query:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR
        + ++GVR+RPWGK+AAEIRDP + GAR WLGTF TAEDAALAYDRAAF+MRG++A LNFP  ++S  +P  +   + +     +++    ++R
Subjt:  QQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR

AT5G47220.1 ethylene responsive element binding factor 23.1e-2254.64Show/hide
Query:  SELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTS
        +E  V  + ++GVR+RPWGK+AAEIRDP + GAR WLGTF TAEDAALAYD AAF+MRG++A LNFP  ++S  +P  +   T+KR    +  +S+S
Subjt:  SELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKLNFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGGGGGATTGGGATTTGTTGGAGTGGATCCGTGAACATCTTCTGGAGGAGAAAATGGATCCGGATCCGGATCCAGCTGCATCAAATGCAAATGCAAATGCTAA
TTCTAATTCGGAGGTGGGAGGGAAAGGGAGTGAATTGGGAGTTGGAGTGCAGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGCAAATACGCGGCGGAGATCAGAGACC
CAAACAGAAAGGGGGCCAGAACCTGGCTGGGCACCTTCCACACCGCCGAGGATGCAGCATTGGCTTACGATCGAGCGGCTTTCAAGATGCGAGGAGCCAAGGCCAAGCTC
AACTTTCCTCATCTCATTGATTCTAATTCCCAACCCCAATCCCTCGCTTGTAATACTAATAAGCGCCCCAGATTCCCCACCCATCAAACTTCAACTTCCCAACGCCGC
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGGGGGATTGGGATTTGTTGGAGTGGATCCGTGAACATCTTCTGGAGGAGAAAATGGATCCGGATCCGGATCCAGCTGCATCAAATGCAAATGCAAATGCTAA
TTCTAATTCGGAGGTGGGAGGGAAAGGGAGTGAATTGGGAGTTGGAGTGCAGCAGTTCAAGGGAGTGAGGCGGAGGCCATGGGGCAAATACGCGGCGGAGATCAGAGACC
CAAACAGAAAGGGGGCCAGAACCTGGCTGGGCACCTTCCACACCGCCGAGGATGCAGCATTGGCTTACGATCGAGCGGCTTTCAAGATGCGAGGAGCCAAGGCCAAGCTC
AACTTTCCTCATCTCATTGATTCTAATTCCCAACCCCAATCCCTCGCTTGTAATACTAATAAGCGCCCCAGATTCCCCACCCATCAAACTTCAACTTCCCAACGCCGC
Protein sequenceShow/hide protein sequence
MSSGDWDLLEWIREHLLEEKMDPDPDPAASNANANANSNSEVGGKGSELGVGVQQFKGVRRRPWGKYAAEIRDPNRKGARTWLGTFHTAEDAALAYDRAAFKMRGAKAKL
NFPHLIDSNSQPQSLACNTNKRPRFPTHQTSTSQRR