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MS010326 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010326
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein ZAT9
Genome locationscaffold878:231922..232146
RNA-Seq ExpressionMS010326
SyntenyMS010326
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044303 - Zinc finger protein ZAT1/4/9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597018.1 Zinc finger protein ZAT9, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2678.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV           EQENA    +T+M ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

XP_008437783.1 PREDICTED: zinc finger protein ZAT9 [Cucumis melo]1.2e-2778.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV             ENAA P+S S+ ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

XP_011650633.1 zinc finger protein ZAT1 [Cucumis sativus]4.0e-2879.52Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV             ENAA P+S SM ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

XP_022950169.1 uncharacterized protein LOC111453340 [Cucurbita moschata]2.2e-2678.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV           EQENA    +T+M ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

XP_022974237.1 zinc finger protein ZAT9-like [Cucurbita maxima]2.9e-2678.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV           EQENA    +T+M ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

TrEMBL top hitse value%identityAlignment
A0A0A0L5N5 Uncharacterized protein1.9e-2879.52Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV             ENAA P+S SM ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

A0A1S3AVF9 zinc finger protein ZAT95.6e-2878.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV             ENAA P+S S+ ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

A0A5A7U3L0 Zinc finger protein ZAT95.6e-2878.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV             ENAA P+S S+ ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

A0A6J1GF12 uncharacterized protein LOC1114533401.1e-2678.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV           EQENA    +T+M ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPG--------EQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

A0A6J1I9R3 zinc finger protein ZAT9-like1.4e-2678.31Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETCNKVFRSYQALGGHRASHKKIKV           EQENA    +T+M ERKIHECPVCFRVFSSGQALGGHKRSHVTG
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVD--------PGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

SwissProt top hitse value%identityAlignment
Q39092 Zinc finger protein ZAT11.1e-1754.05Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVT
        ++CETC KVF+SYQALGGHRASHKK   +  +  +              HECP+C +VF+SGQALGGHKRSH +
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVT

Q9M202 Zinc finger protein ZAT91.7e-2162.34Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKV--DPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETC KVF+SYQALGGHRASHKK +V  +  EQ +     +  +  ++IHECP+C RVF+SGQALGGHKRSH  G
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKV--DPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

Q9SHD0 Zinc finger protein ZAT41.5e-2265.28Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH
        +KCETC KVF+SYQALGGHRASHKK K    + E         + E+K+HECP+CFRVF+SGQALGGHKRSH
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH

Q9SSW0 Zinc finger protein AZF39.9e-1452Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKC  C K F SYQALGGH+ASH+ +    G  EN  +  ST++   K H C VC + F++GQALGGHKR H  G
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG

Q9SSW2 Zinc finger protein AZF27.6e-1447.06Show/hide
Query:  YKCETCNKVFRSYQALGGHRASH--KKIKVDPGEQENAAAPASTSM--------PERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKC  C K F SYQALGGH+ASH  K   V     +++ AP  + +           KIHEC +C +VF +GQALGGHKR H  G
Subjt:  YKCETCNKVFRSYQALGGHRASH--KKIKVDPGEQENAAAPASTSM--------PERKIHECPVCFRVFSSGQALGGHKRSHVTG

Arabidopsis top hitse value%identityAlignment
AT1G02030.1 C2H2-like zinc finger protein8.1e-1954.05Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVT
        ++CETC KVF+SYQALGGHRASHKK   +  +  +              HECP+C +VF+SGQALGGHKRSH +
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVT

AT1G02040.1 C2H2-type zinc finger family protein8.3e-1642.86Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIK--------------------------VDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH
        ++C+ C KVF S+QALGGHRASHKK+K                           D  E E   + A  +      HEC +C RVFSSGQALGGHKR H
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIK--------------------------VDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH

AT1G49900.1 C2H2 type zinc finger transcription factor family4.9e-1649.38Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTS------MPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        +KC  C KVF SYQALGGH+ASH    +   + ENA A A          P  KIH+C +C  +F +GQALGGHKR H  G
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTS------MPERKIHECPVCFRVFSSGQALGGHKRSHVTG

AT2G45120.1 C2H2-like zinc finger protein1.1e-2365.28Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH
        +KCETC KVF+SYQALGGHRASHKK K    + E         + E+K+HECP+CFRVF+SGQALGGHKRSH
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSH

AT3G60580.1 C2H2-like zinc finger protein1.2e-2262.34Show/hide
Query:  YKCETCNKVFRSYQALGGHRASHKKIKV--DPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG
        YKCETC KVF+SYQALGGHRASHKK +V  +  EQ +     +  +  ++IHECP+C RVF+SGQALGGHKRSH  G
Subjt:  YKCETCNKVFRSYQALGGHRASHKKIKV--DPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACAAATGCGAAACATGCAACAAAGTGTTTCGATCTTATCAAGCACTTGGTGGGCACAGAGCGAGCCATAAGAAAATTAAAGTCGACCCCGGCGAGCAGGAAAATGCAGC
TGCTCCCGCTTCCACTTCCATGCCCGAAAGGAAAATTCACGAGTGCCCCGTTTGTTTCAGAGTTTTCTCTTCCGGCCAAGCCCTCGGCGGCCACAAGAGATCTCACGTCA
CCGGC
mRNA sequenceShow/hide mRNA sequence
TACAAATGCGAAACATGCAACAAAGTGTTTCGATCTTATCAAGCACTTGGTGGGCACAGAGCGAGCCATAAGAAAATTAAAGTCGACCCCGGCGAGCAGGAAAATGCAGC
TGCTCCCGCTTCCACTTCCATGCCCGAAAGGAAAATTCACGAGTGCCCCGTTTGTTTCAGAGTTTTCTCTTCCGGCCAAGCCCTCGGCGGCCACAAGAGATCTCACGTCA
CCGGC
Protein sequenceShow/hide protein sequence
YKCETCNKVFRSYQALGGHRASHKKIKVDPGEQENAAAPASTSMPERKIHECPVCFRVFSSGQALGGHKRSHVTG