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MS010340 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010340
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold878:337060..338294
RNA-Seq ExpressionMS010340
SyntenyMS010340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048838.1 hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa]2.8e-5078.69Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        +E FN AD   LNPNAKEWNP+YD APEEDRCLFLTFSNG+PL+EHQIV FFTR++G CIERVYVHYPEG  Q PLFGKVVFVASSI AI+LGGKEEAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKARSKGT
        SIDSKT+WCKK+E +KARS+ +
Subjt:  SIDSKTLWCKKYETKKARSKGT

KAE8650218.1 hypothetical protein Csa_011746 [Cucumis sativus]3.1e-4977.05Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        +E FN AD   LNPNAKEWNP+YD APEEDRCLFLTFSNG+PL+E+QIV FFTR++G CIERVYVHYPEG  Q PLFGKVVFVASSI AI+LGGKEEAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKARSKGT
        SID+KT+WCKK+E++KARS+ +
Subjt:  SIDSKTLWCKKYETKKARSKGT

KAG7028512.1 hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-4573.81Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTR--------RYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIIL
        ++ FN AD  +LNP AKEWNP++D APEEDRCLFLTFSNG PLSEHQIVNFFTR         YG CIERVYVHYP+G  Q PLFGKVVFVASSI AIIL
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTR--------RYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIIL

Query:  GGKEEAKFSIDSKTLWCKKYETKKAR
        GGK+EAKFSI+SKTLWCK+YE +K R
Subjt:  GGKEEAKFSIDSKTLWCKKYETKKAR

XP_022944781.1 uncharacterized protein LOC111449194 [Cucurbita moschata]1.3e-4778.81Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        ++ FN AD  +LNP AKEWNP++D APEEDRCLFLTFSNG PLSEHQIVNFFTR YG CIERVYVHYP+G  Q PLFGKVVFVASSI AIILGGK+EAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKAR
        SI+SKTLWCK+YE +K R
Subjt:  SIDSKTLWCKKYETKKAR

XP_023540960.1 uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]7.7e-4878.81Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        ++ FN AD  +LNP AKEWNP++D APEEDRCLFLTFSNG PLSEHQIVNFFTR+YG CIERVYVHYP+G  Q PLFGKVVFVASSI AIILGGK+EAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKAR
        SI+SKTLWCK+YE +K R
Subjt:  SIDSKTLWCKKYETKKAR

TrEMBL top hitse value%identityAlignment
A0A0A0L3N4 Uncharacterized protein2.1e-4372.95Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        +E FN AD   LNPNAKEWNP+YD APEEDRCLFLTFSNG+PL+E+QIV FFT        RVYVHYPEG  Q PLFGKVVFVASSI AI+LGGKEEAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKARSKGT
        SID+KT+WCKK+E++KARS+ +
Subjt:  SIDSKTLWCKKYETKKARSKGT

A0A5A7U0U8 Uncharacterized protein1.4e-5078.69Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        +E FN AD   LNPNAKEWNP+YD APEEDRCLFLTFSNG+PL+EHQIV FFTR++G CIERVYVHYPEG  Q PLFGKVVFVASSI AI+LGGKEEAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKARSKGT
        SIDSKT+WCKK+E +KARS+ +
Subjt:  SIDSKTLWCKKYETKKARSKGT

A0A6J1E9T6 uncharacterized protein LOC1114320886.6e-4572.95Show/hide
Query:  DTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKE
        + VE    N   D  LNPNAKEW+P++DSAPEEDRCLFLTFSNGYPL+EHQIV+FFTR++G CIERVYVHY EG  + PLFGKVVFVASSI AIIL GK+
Subjt:  DTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKE

Query:  EAKFSIDSKTLWCKKYETKKAR
        EAKFSI+S+T+WCK+YE +KAR
Subjt:  EAKFSIDSKTLWCKKYETKKAR

A0A6J1FZ16 uncharacterized protein LOC1114491946.4e-4878.81Show/hide
Query:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF
        ++ FN AD  +LNP AKEWNP++D APEEDRCLFLTFSNG PLSEHQIVNFFTR YG CIERVYVHYP+G  Q PLFGKVVFVASSI AIILGGK+EAKF
Subjt:  IEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKF

Query:  SIDSKTLWCKKYETKKAR
        SI+SKTLWCK+YE +K R
Subjt:  SIDSKTLWCKKYETKKAR

A0A6J1IWW8 uncharacterized protein LOC1114792143.3e-4472.13Show/hide
Query:  DTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKE
        + VE    N   D  LNPNAKEW+P++DSAPEEDRCLFLTFSNGYPL+EHQIV+FFTR++G CIERVYVHY EG  + PLFGKVVFVASSI AIIL GK+
Subjt:  DTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKE

Query:  EAKFSIDSKTLWCKKYETKKAR
        EAKF I+S+T+WCK+YE +KAR
Subjt:  EAKFSIDSKTLWCKKYETKKAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49290.1 unknown protein8.6e-1342.7Show/hide
Query:  EDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVV--FVASSIAAIILGGKEEAKFSIDSKTLWCKKYETK
        +DR +FLTFS GYP+SE ++  +FTRR+G  IE V +   E  N+ PLF K+V     +S+   I+  +   KF+ID K +W +KY  K
Subjt:  EDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVV--FVASSIAAIILGGKEEAKFSIDSKTLWCKKYETK

AT1G64870.1 unknown protein1.5e-1234.82Show/hide
Query:  WNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYG-PCIERVYVHYPE-------------GRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDS
        WN  +  A +++R +FLTFS G+P+S  ++++ FT  YG  C+E VY+  PE             G  Q PLF K+V  +      IL G+E+ K+ I+ 
Subjt:  WNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYG-PCIERVYVHYPE-------------GRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDS

Query:  KTLWCKKYETKK
        K +W +K++  K
Subjt:  KTLWCKKYETKK

AT3G45200.1 unknown protein6.1e-1132.35Show/hide
Query:  APEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGP-CIERVYVHYPEGRN----------QAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKYET
        A E DR LFLTFS GYP++  +I+  FT+ YG  C+E VY+ +   R+          Q  LF ++V  + +    +L  +++ +  I  K +W +KY+ 
Subjt:  APEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGP-CIERVYVHYPEGRN----------QAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKYET

Query:  KK
        ++
Subjt:  KK

AT5G11220.1 unknown protein8.9e-1031.63Show/hide
Query:  APEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGP-CIERVYV----------HYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKY
        A + +R +F+TFS G+P+S+ ++  FFT+ YG  C+E VY+          +  +   Q  LF K+V  + +    IL G++  +F  + K +W +KY
Subjt:  APEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGP-CIERVYV----------HYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKY

AT5G13620.1 unknown protein1.2e-1442.7Show/hide
Query:  DSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKY
        + A E+DR +FLTFS GYPLSE ++  +FTRR+G  IE + +   EG  QA     V+  A+ I  I+  G E  K++I+ K +W +KY
Subjt:  DSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACAGTTGAGATTGAGGCCTTTAATGCTGCCGATGATCACTACTTAAACCCTAATGCAAAAGAGTGGAACCCAGTTTACGATTCCGCCCCCGAGGAAGATCGTTG
CCTCTTTCTCACTTTCTCGAATGGCTACCCGCTTTCTGAGCACCAAATCGTCAACTTTTTCACCCGGAGATACGGGCCGTGCATCGAGAGGGTGTACGTGCATTATCCAG
AGGGAAGGAATCAGGCGCCATTGTTTGGGAAGGTGGTGTTCGTTGCATCTTCAATAGCAGCCATCATTTTGGGAGGGAAAGAGGAAGCCAAGTTTTCTATAGACAGCAAG
ACCTTGTGGTGTAAGAAATACGAGACCAAAAAAGCTCGCTCCAAGGGAACA
mRNA sequenceShow/hide mRNA sequence
ATGGACACAGTTGAGATTGAGGCCTTTAATGCTGCCGATGATCACTACTTAAACCCTAATGCAAAAGAGTGGAACCCAGTTTACGATTCCGCCCCCGAGGAAGATCGTTG
CCTCTTTCTCACTTTCTCGAATGGCTACCCGCTTTCTGAGCACCAAATCGTCAACTTTTTCACCCGGAGATACGGGCCGTGCATCGAGAGGGTGTACGTGCATTATCCAG
AGGGAAGGAATCAGGCGCCATTGTTTGGGAAGGTGGTGTTCGTTGCATCTTCAATAGCAGCCATCATTTTGGGAGGGAAAGAGGAAGCCAAGTTTTCTATAGACAGCAAG
ACCTTGTGGTGTAAGAAATACGAGACCAAAAAAGCTCGCTCCAAGGGAACA
Protein sequenceShow/hide protein sequence
MDTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSK
TLWCKKYETKKARSKGT