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MS010367 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010367
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold878:467418..467852
RNA-Seq ExpressionMS010367
SyntenyMS010367
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650335.1 hypothetical protein Csa_010297 [Cucumis sativus]8.5e-4369.87Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY
        MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P      SY
Subjt:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY

Query:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR
        Y  PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Subjt:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR

XP_004134420.3 zinc finger protein 10 [Cucumis sativus]8.5e-4369.87Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY
        MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P      SY
Subjt:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY

Query:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR
        Y  PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Subjt:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR

XP_008439363.1 PREDICTED: zinc finger protein 7 [Cucumis melo]5.0e-4368.15Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPA
        MDFGKQGSWDSSSDEYEPQD        D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P     P+
Subjt:  MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPA

Query:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR
          ++PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+LQIDQ R
Subjt:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR

XP_022151484.1 zinc finger protein 8-like [Momordica charantia]3.7e-7899.31Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY
        MDFGKQGSWDSSSDEY PQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY
Subjt:  MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY

Query:  HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR
        HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR
Subjt:  HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR

XP_038877191.1 zinc finger protein 7-like [Benincasa hispida]2.8e-4672.55Show/hide
Query:  MDFGKQGSWDSSSDEYEPQD--QVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSS---SHSHDQIFPPISPHPAASYY
        MDFGKQGSWDSSSDEYEPQD   +  D+T+ DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSS   SHS+DQ FPPI   P  SYY
Subjt:  MDFGKQGSWDSSSDEYEPQD--QVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSS---SHSHDQIFPPISPHPAASYY

Query:  PPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR
        PPPP      +YRMYFD TAAAN+PIH + RS    N+ LLGANL+LQIDQ R
Subjt:  PPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR

TrEMBL top hitse value%identityAlignment
A0A0A0L4H6 C2H2-type domain-containing protein4.1e-4369.87Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY
        MDFGKQGSWDSSSDEYE QD V     D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P      SY
Subjt:  MDFGKQGSWDSSSDEYEPQDQV---PKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP--HPAASY

Query:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR
        Y  PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+L+IDQTR
Subjt:  Y--PPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR

A0A1S3AZA2 zinc finger protein 72.4e-4368.15Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPA
        MDFGKQGSWDSSSDEYEPQD        D  +DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK RN I SSSS HS HDQ FPPI P     P+
Subjt:  MDFGKQGSWDSSSDEYEPQDQ----VPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS-HS-HDQIFPPISP----HPA

Query:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR
          ++PPPP      +YRMYFD TAA N+PIH   +  A  N++LLGANL+LQIDQ R
Subjt:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIHRHRSQGA--NEDLLGANLTLQIDQTR

A0A6J1DD81 zinc finger protein 8-like1.8e-7899.31Show/hide
Query:  MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY
        MDFGKQGSWDSSSDEY PQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY
Subjt:  MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNY

Query:  HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR
        HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR
Subjt:  HNNYNYRMYFDTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR

A0A6J1E9V2 transcriptional regulator SUPERMAN-like1.5e-4066.88Show/hide
Query:  MDFGKQGSWDSSSDEYEP----QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPAASY
        MDFGKQG+ DSSSDEY+P    Q       TD DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK K RN   SSSS  HS+DQ+FPP+S  P   Y
Subjt:  MDFGKQGSWDSSSDEYEP----QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPAASY

Query:  YPPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR
        YPPPP   +  +YRMYFD T+A N+PIH + RS G  N++LLGA+L+LQIDQTR
Subjt:  YPPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR

A0A6J1IWL0 zinc finger protein 11-like2.7e-4267.52Show/hide
Query:  MDFGKQGSWDSSSDEYEP-------QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPA
        MDFGKQGS DSSSDEY+P       +   PK  TD DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAK K RN   SSSS  HS+DQ+FPP+S  P 
Subjt:  MDFGKQGSWDSSSDEYEP-------QDQVPKDETD-DPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSS--HSHDQIFPPISPHPA

Query:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR
          YYPPPP    + +YRMYFD TAA N+PIH + RS G  N++L GANL+LQIDQTR
Subjt:  ASYYPPPPNYHNNYNYRMYFDTTAAANYPIH-RHRSQG-ANEDLLGANLTLQIDQTR

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 105.4e-0840Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDT
        R Y C+FC+R F +AQALGGHMN+HR+DRA+ KQ +            +FP  S  P    +    N H    Y + F+T
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYFDT

Q38895 Transcriptional regulator SUPERMAN4.1e-0847.22Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASY----YPPPPNY
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+ S      P  P+P  SY      PPP++
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASY----YPPPPNY

Q9LHS9 Probable transcriptional regulator RABBIT EARS3.4e-1059.62Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ KQ++L PSS+    DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP

Q9SLB8 Zinc finger protein 114.6e-0752.73Show/hide
Query:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHP
        Y C+FC+R F +AQALGGHMN+HR+DRAK +Q   IPS     H    P  +P+P
Subjt:  YECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHP

Q9SR34 Transcriptional regulator TAC19.2e-0851.72Show/hide
Query:  DSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQR
        D  SD          D++ + + R Y C+FC RGF+NAQALGGHMNIHR+DRAK +Q+
Subjt:  DSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQR

Arabidopsis top hitse value%identityAlignment
AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein2.9e-0947.22Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASY----YPPPPNY
        R Y C+FCKR F +AQALGGHMN+HR+DRA+ + +    SSS+ S      P  P+P  SY      PPP++
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASY----YPPPPNY

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.0e-0941.11Show/hide
Query:  QVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIF----PPISPHPAASYYPPPPNYHNNYNY
        Q+         +R Y+C  CKRGFTN QALGGH NIHR++R +       PSSSS SH   F    P  SP  + ++  PPP +    +Y
Subjt:  QVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIF----PPISPHPAASYYPPPPNYHNNYNY

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein2.2e-1281.08Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNL
        RPY C FC+RGF+NAQALGGHMNIHRKDRAK +Q NL
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNL

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein2.4e-1159.62Show/hide
Query:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP
        R Y C+FC R F +AQALGGHMN+HR+DRA+ KQ++L PSS+    DQ  PP
Subjt:  RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPP

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein2.2e-1269.39Show/hide
Query:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKQRNLIPSSSSHSH
        T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK +N    + S +H
Subjt:  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKQRNLIPSSSSHSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTG
CACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCT
CTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTC
GACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGGAAAACAGGGGAGTTGGGACAGTTCGAGCGACGAATATGAGCCACAGGATCAAGTCCCCAAAGACGAAACTGATGACCCCACAAAACGTCCCTACGAGTG
CACGTTTTGCAAGCGCGGGTTCACCAACGCCCAGGCCCTGGGCGGCCACATGAACATCCACCGCAAGGACCGCGCCAAAGCCAAGCAACGTAATTTAATTCCTTCCTCCT
CTTCCCACTCGCACGACCAAATTTTCCCACCCATTTCGCCCCACCCCGCCGCCTCCTATTACCCTCCGCCGCCCAATTACCACAATAACTATAACTACCGCATGTATTTC
GACACCACGGCGGCGGCCAATTACCCAATCCACCGCCACAGATCGCAGGGCGCCAATGAAGATCTTCTCGGGGCCAATCTCACCCTGCAAATTGATCAAACCAGG
Protein sequenceShow/hide protein sequence
MDFGKQGSWDSSSDEYEPQDQVPKDETDDPTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQRNLIPSSSSHSHDQIFPPISPHPAASYYPPPPNYHNNYNYRMYF
DTTAAANYPIHRHRSQGANEDLLGANLTLQIDQTR