; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010389 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010389
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionethylene-responsive transcription factor ERF096-like
Genome locationscaffold878:590111..590539
RNA-Seq ExpressionMS010389
SyntenyMS010389
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049259.1 ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa]4.4e-5282.39Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRG+ DD   AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLTS+   GGGG +
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
         SSG++SSSSMSMRQ NEVIEFEYLDDKVLEDLLDYG+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

XP_022153350.1 ethylene-responsive transcription factor ERF096-like [Momordica charantia]3.4e-6897.9Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD SGRGRGYVDDSAAAGAGREVRYRGVR+RPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTST GGGGGGGFS
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

XP_022980085.1 ethylene-responsive transcription factor ERF096 [Cucurbita maxima]5.8e-5282.64Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRGY +DS+ AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTS   GG GGG 
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SSSG   SSSMSMR  NEVIEFEYLDDKVLEDLLD G+E +K +
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

XP_023529041.1 ethylene-responsive transcription factor ERF096-like [Cucurbita pepo subsp. pepo]7.6e-5283.1Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRGY +DS+ AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLT+     GGGGF
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
        SSSG   SSSMSMR  NEVIEFEYLDDKVLEDLLD G+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

XP_038877364.1 ethylene-responsive transcription factor ERF096 [Benincasa hispida]4.6e-5784.51Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRGY +DS  AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLTS+GGGGGGG +
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
        SS  ++SSSSMSMRQ NEVIEFEYLDDKVLEDLLDYG+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

TrEMBL top hitse value%identityAlignment
A0A1S3AW98 ethylene-responsive transcription factor ERF0961.8e-5181.69Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRG+ DD   AG  RE+ YRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLTS+   GGGG +
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
         SSG++SSSSMSMRQ NEVIEFEYLDDKVLEDLLDYG+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

A0A5A7U6W8 Ethylene-responsive transcription factor ERF0962.1e-5282.39Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRG+ DD   AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG R+WLGTFNTAEEAARAYDRAAY+MRGHLAILNFPNEYPLTS+   GGGG +
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
         SSG++SSSSMSMRQ NEVIEFEYLDDKVLEDLLDYG+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

A0A6J1DGK5 ethylene-responsive transcription factor ERF096-like1.6e-6897.9Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD SGRGRGYVDDSAAAGAGREVRYRGVR+RPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTST GGGGGGGFS
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

A0A6J1E9T0 ethylene-responsive transcription factor ERF096-like5.3e-5180.28Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRGY +D + AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTS G GGG    
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
          S ++ SSSMSMR  NEVIEFEYLDDKVLEDLLD G+E +K
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

A0A6J1IV86 ethylene-responsive transcription factor ERF0962.8e-5282.64Show/hide
Query:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF
        MDES GRGRGY +DS+ AG  RE+RYRGVRRRPWGKFAAEIRDSRRQG RMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTS   GG GGG 
Subjt:  MDES-GRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGF

Query:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SSSG   SSSMSMR  NEVIEFEYLDDKVLEDLLD G+E +K +
Subjt:  SSSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

SwissProt top hitse value%identityAlignment
O04681 Pathogenesis-related genes transcriptional activator PTI54.2e-2178.69Show/hide
Query:  RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNE
        +YRGVRRRPWGK+AAEIRDS R GAR+WLGTF TAEEAA AYDRAA+ MRG  A+LNFP+E
Subjt:  RYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNE

P93822 Ethylene-responsive transcription factor 145.7e-3456.64Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD+ GR  G     +  G   + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAYSMRG  AILNFP+EY +          G  
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SS TA++SS S +Q   V EFEYLDD VL++LL+YG+   K++
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

Q9LSX0 Ethylene-responsive transcription factor ERF0964.1e-3254.61Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD+ GRG G              +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAYSMRG  AILNFP+EY +    G G     +
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
         +G++S+S+ +   + +V EFEYLDD VLE+LL+ G++  K
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK

Q9LTC5 Ethylene-responsive transcription factor ERF0988.2e-3360.8Show/hide
Query:  REVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEY-----------PLTSTGGGGGGGGFSSSGTASSSS
        ++ R+RGVRRRPWGKFAAEIRD  R GAR+WLGTF TAEEAARAYDRAA+++RGHLAILNFPNEY           P  S+         SSS  ++S++
Subjt:  REVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEY-----------PLTSTGGGGGGGGFSSSGTASSSS

Query:  MSMRQNNEVIEFEYLDDKVLEDLLD
        +S +   EV EFEYLDDKVLE+LLD
Subjt:  MSMRQNNEVIEFEYLDDKVLEDLLD

Q9LTC6 Ethylene-responsive transcription factor ERF0956.3e-3359.38Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFSSSGTASSSSMSMR------QN
        E++YRGVR+RPWGK+AAEIRDS R GAR+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY +   G  G     S     +SSS   R        
Subjt:  EVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFSSSGTASSSSMSMR------QN

Query:  NEVIEFEYLDDKVLEDLLDYGQEDEKSN
         EVIEFEYLDD +LE+LLDYG+   + N
Subjt:  NEVIEFEYLDDKVLEDLLDYGQEDEKSN

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 144.0e-3556.64Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD+ GR  G     +  G   + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+AARAYDRAAYSMRG  AILNFP+EY +          G  
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN
        SS TA++SS S +Q   V EFEYLDD VL++LL+YG+   K++
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN

AT3G23220.1 Integrase-type DNA-binding superfamily protein4.5e-3459.38Show/hide
Query:  EVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFSSSGTASSSSMSMR------QN
        E++YRGVR+RPWGK+AAEIRDS R GAR+WLGTFNTAE+AARAYDRAA+ MRG  AILNFP+EY +   G  G     S     +SSS   R        
Subjt:  EVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFSSSGTASSSSMSMR------QN

Query:  NEVIEFEYLDDKVLEDLLDYGQEDEKSN
         EVIEFEYLDD +LE+LLDYG+   + N
Subjt:  NEVIEFEYLDDKVLEDLLDYGQEDEKSN

AT3G23230.1 Integrase-type DNA-binding superfamily protein5.8e-3460.8Show/hide
Query:  REVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEY-----------PLTSTGGGGGGGGFSSSGTASSSS
        ++ R+RGVRRRPWGKFAAEIRD  R GAR+WLGTF TAEEAARAYDRAA+++RGHLAILNFPNEY           P  S+         SSS  ++S++
Subjt:  REVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEY-----------PLTSTGGGGGGGGFSSSGTASSSS

Query:  MSMRQNNEVIEFEYLDDKVLEDLLD
        +S +   EV EFEYLDDKVLE+LLD
Subjt:  MSMRQNNEVIEFEYLDDKVLEDLLD

AT4G17500.1 ethylene responsive element binding factor 14.3e-2169.57Show/hide
Query:  SAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFP
        SAA  A +   YRGVR+RPWGKFAAEIRD  + GAR+WLGTF TAE+AA AYDRAA+ MRG  A+LNFP
Subjt:  SAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFP

AT5G43410.1 Integrase-type DNA-binding superfamily protein2.9e-3354.61Show/hide
Query:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS
        MD+ GRG G              +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEAARAYD+AAYSMRG  AILNFP+EY +    G G     +
Subjt:  MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFS

Query:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK
         +G++S+S+ +   + +V EFEYLDD VLE+LL+ G++  K
Subjt:  SSGTASSSSMSMRQNNEVIEFEYLDDKVLEDLLDYGQEDEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAAAGCGGGCGTGGAAGGGGCTACGTGGATGATTCCGCGGCGGCCGGAGCCGGGCGAGAGGTCCGCTACCGGGGGGTTCGGCGGCGGCCGTGGGGGAAATTCGC
GGCGGAGATTCGCGACTCTAGACGGCAAGGAGCACGCATGTGGCTCGGAACATTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCAGCGTACAGCATGAGGG
GTCATTTGGCCATTCTAAACTTCCCCAATGAATACCCTCTCACCAGCACCGGCGGCGGCGGCGGTGGCGGCGGATTTTCTTCTTCCGGTACTGCGTCTTCTTCTTCCATG
TCAATGCGGCAGAATAATGAAGTGATCGAATTTGAGTACTTGGATGATAAAGTGCTGGAGGATCTTCTTGATTATGGACAAGAAGACGAAAAGAGCAAC
mRNA sequenceShow/hide mRNA sequence
ATGGACGAAAGCGGGCGTGGAAGGGGCTACGTGGATGATTCCGCGGCGGCCGGAGCCGGGCGAGAGGTCCGCTACCGGGGGGTTCGGCGGCGGCCGTGGGGGAAATTCGC
GGCGGAGATTCGCGACTCTAGACGGCAAGGAGCACGCATGTGGCTCGGAACATTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCAGCGTACAGCATGAGGG
GTCATTTGGCCATTCTAAACTTCCCCAATGAATACCCTCTCACCAGCACCGGCGGCGGCGGCGGTGGCGGCGGATTTTCTTCTTCCGGTACTGCGTCTTCTTCTTCCATG
TCAATGCGGCAGAATAATGAAGTGATCGAATTTGAGTACTTGGATGATAAAGTGCTGGAGGATCTTCTTGATTATGGACAAGAAGACGAAAAGAGCAAC
Protein sequenceShow/hide protein sequence
MDESGRGRGYVDDSAAAGAGREVRYRGVRRRPWGKFAAEIRDSRRQGARMWLGTFNTAEEAARAYDRAAYSMRGHLAILNFPNEYPLTSTGGGGGGGGFSSSGTASSSSM
SMRQNNEVIEFEYLDDKVLEDLLDYGQEDEKSN