; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010397 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010397
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionactin-depolymerizing factor
Genome locationscaffold878:639937..641260
RNA-Seq ExpressionMS010397
SyntenyMS010397
Gene Ontology termsGO:0030042 - actin filament depolymerization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR002108 - Actin-depolymerising factor homology domain
IPR017904 - ADF/Cofilin
IPR029006 - ADF-H/Gelsolin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8527768.1 hypothetical protein F0562_035363 [Nyssa sinensis]4.5e-5992.13Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TNASSGMGVA+HSKSTYLELQRKKVHRY+IF IDEKKKEVV+EKTG PAES+DDFTASLPEND RYAV+DFDFVTSENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSKDRFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

XP_015887837.1 actin-depolymerizing factor [Ziziphus jujuba]9.9e-5992.13Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TN+SSGMGVAEHSKSTYLELQRKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RYAV+DFDFVT+ENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSK+RFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

XP_022146440.1 actin-depolymerizing factor-like isoform X1 [Momordica charantia]5.3e-6098.37Show/hide
Query:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK
        MGVA+HSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSEN QKSKIFFISWSPSVSRIRSKMLYATSK
Subjt:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK

Query:  DRFRRELEGIHYEIQATDPTEDG
        DRFRRELEGIHYEIQATDPTEDG
Subjt:  DRFRRELEGIHYEIQATDPTEDG

XP_022146448.1 actin-depolymerizing factor-like isoform X2 [Momordica charantia]2.4e-6099.19Show/hide
Query:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK
        MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSEN QKSKIFFISWSPSVSRIRSKMLYATSK
Subjt:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK

Query:  DRFRRELEGIHYEIQATDPTEDG
        DRFRRELEGIHYEIQATDPTEDG
Subjt:  DRFRRELEGIHYEIQATDPTEDG

XP_030470783.1 actin-depolymerizing factor [Syzygium oleosum]9.9e-5992.13Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TNASSGMGVAEHSK+TYLELQRKKVHRYVIF IDEKKKEVVVEKTG PAES++DFT+SLPEND RYAV+DFDFVTSENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSKDRFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

TrEMBL top hitse value%identityAlignment
A0A5B7A162 Putative actin-depolymerizing factor2.8e-5992.91Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TNASSGMGVA+H KSTYLELQRKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RYAV+DFDFVTSENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSKDRFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

A0A5B7A3W1 Putative actin-depolymerizing factor2.8e-5992.91Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TNASSGMGVA+H KSTYLELQRKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RYAV+DFDFVTSENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSKDRFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

A0A5J5ACE3 ADF-H domain-containing protein2.2e-5992.13Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        TNASSGMGVA+HSKSTYLELQRKKVHRY+IF IDEKKKEVV+EKTG PAES+DDFTASLPEND RYAV+DFDFVTSENCQKSKIFFI+WSPSVSRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LYATSKDRFRRELEGIHYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

A0A6J1CX92 actin-depolymerizing factor-like isoform X12.5e-6098.37Show/hide
Query:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK
        MGVA+HSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSEN QKSKIFFISWSPSVSRIRSKMLYATSK
Subjt:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK

Query:  DRFRRELEGIHYEIQATDPTEDG
        DRFRRELEGIHYEIQATDPTEDG
Subjt:  DRFRRELEGIHYEIQATDPTEDG

A0A6J1CYL7 actin-depolymerizing factor-like isoform X21.1e-6099.19Show/hide
Query:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK
        MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSEN QKSKIFFISWSPSVSRIRSKMLYATSK
Subjt:  MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSK

Query:  DRFRRELEGIHYEIQATDPTEDG
        DRFRRELEGIHYEIQATDPTEDG
Subjt:  DRFRRELEGIHYEIQATDPTEDG

SwissProt top hitse value%identityAlignment
Q0DLA3 Actin-depolymerizing factor 77.2e-4465.62Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA+SGM V +  K  +LEL+ K+ +R++I+ IDEKKK VVVEK G P  ++DDF ASLP N+ RYA+FD+DFVT ENCQKSKIFFI+WSP  SR+RSKM+
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTEDG
        YA+SKDRF+REL+GI  E+QATDPTE G
Subjt:  YATSKDRFRRELEGIHYEIQATDPTEDG

Q2QLT8 Actin-depolymerizing factor 114.2e-5278.12Show/hide
Query:  QTNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSK
        + NASSG+GVA   K T+LELQRKK HRYVIF ID+K KEVVVEKTGS  ESFDDF  SLPE+D RYA++DFDFVT ENCQKSKIFF++WSPSVSRIR+K
Subjt:  QTNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSK

Query:  MLYATSKDRFRRELEGIHYEIQATDPTE
        MLYATSK+RFRREL+G+HYEIQATDP+E
Subjt:  MLYATSKDRFRRELEGIHYEIQATDPTE

Q8SAG3 Actin-depolymerizing factor1.9e-5785.71Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NASSGMGVA+HSK+T+LEL+RKKVHRYVIF IDEKKKEVVVEKTG PAESFD+F A+LPEND RYAV+DFDFVTSENCQKSKIFFI+WSP  SRIR+KML
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        YATSK+RFRREL+G+HYEIQATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

Q9AY76 Actin-depolymerizing factor 24.8e-4874.02Show/hide
Query:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM
        +NASSGMGVA   + T+LELQ KK  RYVIF I+EK+K+VVVEKTG+  ES+DDF ASLPEND RYA++DFDFVT EN QKSKIFFI+WSPS SRIR+KM
Subjt:  TNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKM

Query:  LYATSKDRFRRELEGIHYEIQATDPTE
        LY+TSKDR ++EL+G HYEIQATDPTE
Subjt:  LYATSKDRFRRELEGIHYEIQATDPTE

Q9ZSK2 Actin-depolymerizing factor 64.2e-5278.57Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA SGMGVA+ SK+T+LELQRKK HRYV+F IDE KKEVVVEKTG+P ES+DDF ASLP+ND RYAV+DFDFVTSENCQKSKIFF +WSPS S IR+K+L
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        Y+TSKD+  REL+GIHYEIQATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

Arabidopsis top hitse value%identityAlignment
AT2G31200.1 actin depolymerizing factor 63.0e-5378.57Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA SGMGVA+ SK+T+LELQRKK HRYV+F IDE KKEVVVEKTG+P ES+DDF ASLP+ND RYAV+DFDFVTSENCQKSKIFF +WSPS S IR+K+L
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        Y+TSKD+  REL+GIHYEIQATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

AT3G46010.1 actin depolymerizing factor 13.1e-4258.73Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA+SGM V +  K  +LEL+ K+ HR++++ I+EK+K+VVVEK G P +++++F A LP ++ RYA++DFDFVT+ENCQKSKIFFI+W P ++++RSKM+
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        YA+SKDRF+REL+GI  E+QATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

AT3G46010.2 actin depolymerizing factor 13.1e-4258.73Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA+SGM V +  K  +LEL+ K+ HR++++ I+EK+K+VVVEK G P +++++F A LP ++ RYA++DFDFVT+ENCQKSKIFFI+W P ++++RSKM+
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        YA+SKDRF+REL+GI  E+QATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

AT4G00680.1 actin depolymerizing factor 81.4e-4260.32Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        N++SGM V +  K  +LEL+ K+ +R+++F IDEK ++V +EK G+P E++DDFT+S+P+++ RYAV+DFDF T +NCQKSKIFFI+WSP  SR+RSKML
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        YA+SKDRF+RE+EGI  E+QATDP+E
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE

AT5G59890.1 actin depolymerizing factor 41.1e-4260.32Show/hide
Query:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML
        NA+SGM V +  K  +LEL+ K+ HR++++ I+EK+K+V+VEK G P  +++DF ASLP ++ RYA++DFDFVT+ENCQKSKIFFI+W P V+++RSKM+
Subjt:  NASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKML

Query:  YATSKDRFRRELEGIHYEIQATDPTE
        YA+SKDRF+REL+GI  E+QATDPTE
Subjt:  YATSKDRFRRELEGIHYEIQATDPTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGACTAATGCTTCGTCTGGAATGGGTGTTGCTGAGCATAGCAAAAGCACATACCTGGAACTTCAGCGAAAGAAGGTTCACCGGTATGTGATTTTTATGATTGATGAAAA
GAAAAAAGAGGTGGTGGTGGAAAAGACTGGGAGCCCAGCTGAGAGCTTTGATGATTTCACTGCTTCGTTGCCTGAGAATGACTATAGATATGCAGTTTTTGACTTTGATT
TTGTGACTTCTGAGAACTGCCAAAAGAGCAAAATCTTTTTCATTTCATGGTCTCCATCTGTATCAAGGATCCGTTCCAAGATGCTTTATGCAACATCAAAGGACAGGTTT
AGAAGGGAATTGGAGGGAATCCATTACGAGATTCAGGCAACTGACCCAACTGAAGATGGA
mRNA sequenceShow/hide mRNA sequence
CAGACTAATGCTTCGTCTGGAATGGGTGTTGCTGAGCATAGCAAAAGCACATACCTGGAACTTCAGCGAAAGAAGGTTCACCGGTATGTGATTTTTATGATTGATGAAAA
GAAAAAAGAGGTGGTGGTGGAAAAGACTGGGAGCCCAGCTGAGAGCTTTGATGATTTCACTGCTTCGTTGCCTGAGAATGACTATAGATATGCAGTTTTTGACTTTGATT
TTGTGACTTCTGAGAACTGCCAAAAGAGCAAAATCTTTTTCATTTCATGGTCTCCATCTGTATCAAGGATCCGTTCCAAGATGCTTTATGCAACATCAAAGGACAGGTTT
AGAAGGGAATTGGAGGGAATCCATTACGAGATTCAGGCAACTGACCCAACTGAAGATGGA
Protein sequenceShow/hide protein sequence
QTNASSGMGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENCQKSKIFFISWSPSVSRIRSKMLYATSKDRF
RRELEGIHYEIQATDPTEDG