CuGenDBv2

Gene ID	MS010398
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Myb-related transcription factor
Genome location	scaffold878:647140..647718
RNA-Seq Expression	MS010398
Synteny	MS010398
Gene Ontology terms	GO:0009409 - response to cold (biological process) GO:0009414 - response to water deprivation (biological process) GO:0009651 - response to salt stress (biological process)
InterPro domains	IPR001005 - SANT/Myb domain IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALO18749.1 myb-related transcription factor [Citrullus lanatus]

2.6e-61

91.67

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWT EED+ILISYIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQ  VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+VNKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

XP_008438526.1 PREDICTED: myb-related protein Myb4-like [Cucumis melo]

5.2e-62

92.5

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWTAEED+ILISYIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQE+VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+ NKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

XP_011650935.1 transcription factor MYB30 [Cucumis sativus]

4.4e-61

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWT EED+ILI+YIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQ++VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+ NKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

XP_022151591.1 transcription factor MYB30-like [Momordica charantia]

9.1e-67

100

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKRLVNKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

XP_038902988.1 transcription factor MYB14-like [Benincasa hispida]

1.5e-61

91.67

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWT EED+ILISYIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQ  VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+VNKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

TrEMBL top hits

e value

%identity

Alignment

A0A0S2I8B4 Myb-related transcription factor

1.2e-61

91.67

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWT EED+ILISYIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQ  VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+VNKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

A0A1S3AW89 myb-related protein Myb4-like

2.5e-62

92.5

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEK+GLKKGPWTAEED+ILISYIN+HGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT EEQE+VL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+ NKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

A0A6J1DF45 transcription factor MYB30-like

4.4e-67

100

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKRLVNKQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

A0A6J1E9Z1 transcription factor MYB30-like

1.5e-59

89.17

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEKMGLKKGPWT EEDQILISYI +HGHSNWRALPKLAGL RCGKSCRLRWINYLRP +KRGNFT +EQ MVL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+V KQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

A0A6J1IRB4 transcription factor MYB14-like

6.8e-60

89.17

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        MVRAPCCEKMGLKKGPWT EEDQILISY+ +HGHSNWRALPKLAGLLRCGKSCRLRWINYLRP +KRGNFT +EQ MVL LHEKLGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKNFWHTHLKKR+V KQ
Subjt:  DNEIKNFWHTHLKKRLVNKQ

SwissProt top hits

e value

%identity

Alignment

Q6K1S6 Transcription factor MYB30

5.2e-57

80.67

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMGLK+GPWTAEED+IL+++I  HGHSNWRALP+ AGLLRCGKSCRLRWINYLRPDIKRGNFT+EE++ ++ LH+ LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNK
        DNEIKN WHTHLKKRL  K
Subjt:  DNEIKNFWHTHLKKRLVNK

Q7XBH4 Transcription factor MYB4

2.6e-56

81.03

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMGLKKGPWT EED++L+++I  HGH NWRALPK AGLLRCGKSCRLRWINYLRPDIKRGNF++EE++ ++ LHE LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRL
        DNEIKN WHTHLKKRL
Subjt:  DNEIKNFWHTHLKKRL

Q9LNC9 Transcription factor MYB13

3.4e-56

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M R PCCEK+GLKKGPW+AEED+ILI+YI+ HGH NWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT  E++ ++ LH+ LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKN WHTHLKKRL + Q
Subjt:  DNEIKNFWHTHLKKRLVNKQ

Q9LTC4 Transcription factor MYB15

1.2e-56

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMGLK+GPWT EEDQIL+S+I  HGHSNWRALPK AGLLRCGKSCRLRW+NYL+PDIKRGNFT+EE++ ++ LH+ LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKN WHTHLKKRL + Q
Subjt:  DNEIKNFWHTHLKKRLVNKQ

Q9SJX8 Transcription factor MYB14

2.0e-56

82.76

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMG+K+GPWT EEDQILI+YI+ +GHSNWRALPK AGLLRCGKSCRLRWINYLRPDIKRGNFT +E++ ++ LHE LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRL
        DNEIKN WHTHLKKRL
Subjt:  DNEIKNFWHTHLKKRL

Arabidopsis top hits

e value

%identity

Alignment

AT1G06180.1 myb domain protein 13

2.4e-57

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M R PCCEK+GLKKGPW+AEED+ILI+YI+ HGH NWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFT  E++ ++ LH+ LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKN WHTHLKKRL + Q
Subjt:  DNEIKNFWHTHLKKRLVNKQ

AT2G31180.1 myb domain protein 14

1.4e-57

82.76

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMG+K+GPWT EEDQILI+YI+ +GHSNWRALPK AGLLRCGKSCRLRWINYLRPDIKRGNFT +E++ ++ LHE LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRL
        DNEIKN WHTHLKKRL
Subjt:  DNEIKNFWHTHLKKRL

AT3G23250.1 myb domain protein 15

8.3e-58

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M RAPCCEKMGLK+GPWT EEDQIL+S+I  HGHSNWRALPK AGLLRCGKSCRLRW+NYL+PDIKRGNFT+EE++ ++ LH+ LGNRWSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVNKQ
        DNEIKN WHTHLKKRL + Q
Subjt:  DNEIKNFWHTHLKKRLVNKQ

AT3G61250.1 myb domain protein 17

6.1e-53

72.88

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M R PCC+K+GLKKGPWT EED++L+++I ++GH +WR LPKLAGLLRCGKSCRLRW NYLRPDIKRG FT +E+++V+QLH  LGNRW+AIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLVN
        DNEIKN W+THLKKRL++
Subjt:  DNEIKNFWHTHLKKRLVN

AT4G21440.1 MYB-like 102

1.0e-52

73.5

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Query:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT
        M R+PCCEK GLKKGPWT+EEDQ L+ YI +HG+ NWR LPK AGL RCGKSCRLRW NYLRPDIKRG F+ EE+E ++QLH  LGN+WSAIAA LPGRT
Subjt:  MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRT

Query:  DNEIKNFWHTHLKKRLV
        DNEIKNFW+TH++K+L+
Subjt:  DNEIKNFWHTHLKKRLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTCAGAGCTCCTTGCTGTGAGAAAATGGGACTGAAAAAGGGGCCATGGACAGCTGAAGAAGATCAGATTTTGATCTCTTATATCAATGAACATGGCCATAGCAACTG
GCGTGCCCTTCCCAAGCTTGCTGGCCTTCTGCGATGCGGGAAGAGTTGCAGACTCCGTTGGATAAACTACCTGAGGCCTGATATCAAGAGAGGAAACTTCACCCAAGAGG
AACAGGAAATGGTTCTTCAGCTCCATGAAAAGCTTGGCAATAGGTGGTCAGCCATTGCCGCGAATCTGCCTGGTCGAACGGATAACGAAATTAAAAACTTCTGGCACACC
CATTTGAAGAAACGGCTCGTAAATAAACAG

mRNA sequence

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Protein sequence

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MVRAPCCEKMGLKKGPWTAEEDQILISYINEHGHSNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTQEEQEMVLQLHEKLGNRWSAIAANLPGRTDNEIKNFWHT
HLKKRLVNKQ

MS010398 (gene) of Bitter gourd (TR) v1 genome