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MS010406 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010406
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L14-2-like
Genome locationscaffold878:684982..686478
RNA-Seq ExpressionMS010406
SyntenyMS010406
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018796.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6197.73Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_022143563.1 60S ribosomal protein L14-2-like [Momordica charantia]2.3e-63100Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_022947422.1 60S ribosomal protein L14-2-like [Cucurbita moschata]5.7e-6298.48Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_038880451.1 60S ribosomal protein L14-2-like [Benincasa hispida]9.7e-6297.73Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKEL+EAM+AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

XP_038881110.1 60S ribosomal protein L14-2-like [Benincasa hispida]1.3e-6197.73Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLV+KRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

TrEMBL top hitse value%identityAlignment
A0A6J1CR10 60S ribosomal protein L14-2-like1.1e-63100Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1EG14 60S ribosomal protein L14-2-like6.2e-6297.73Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1G6E8 60S ribosomal protein L14-2-like2.8e-6298.48Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1IGF2 60S ribosomal protein L14-2-like2.8e-6298.48Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

A0A6J1IT01 60S ribosomal protein L14-2-like6.2e-6297.73Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKRYVEIGRVALVNYGEDYGKLVVIVDVID NRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAM AADVQKKWEDSSWGRKLLVKKRRAS
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES
        LNDFDRFKLMLAKIKRAGLVRQELAKL+KSES
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKSES

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L142.2e-2448.09Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRA
        F+R+VEIGRVA   YG D GKLV IVDVID NRALVD P   + R  MNFK L LT++K       +   + +A    ++ KKWE+S   +K+  K++R 
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRA

Query:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKS
        +L DF+RFKLM AK  R  L++ E  KL+K+
Subjt:  SLNDFDRFKLMLAKIKRAGLVRQELAKLKKS

P55844 Probable 60S ribosomal protein L144.3e-5280Show/hide
Query:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS
        PFKR+VEIGRVAL+NYG+DYG+LVVIVDVID  RALVDAPDM RS +NFKRLSLTD+KIDIKRVP+KK+LI+A+ AADV+ KW  SSWGRKL+VKK RA+
Subjt:  PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRAS

Query:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKS
        LNDFDRFK+MLAKIKRA  VRQELAKLKK+
Subjt:  LNDFDRFKLMLAKIKRAGLVRQELAKLKKS

Q7XYA7 60S ribosomal protein L142.2e-2449.23Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRR
        F R+VE GRVALV+YGE   KLVVIVD++D NR LVD+P   + R  +N KR++LT IK+ DI R     E+    +AA V + +  S WG+KL  +++R
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRR

Query:  ASLNDFDRFKLMLAKIKRAGLVRQELAKLK
        A+L+DF RFK+M+A++K++  +  ELAKLK
Subjt:  ASLNDFDRFKLMLAKIKRAGLVRQELAKLK

Q9SIM4 60S ribosomal protein L14-16.6e-5383.59Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL
        FKR+VEIGRVALVNYGEDYGKLVVIVDV+D NRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM  ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKRAGLVRQELAKLKK
        NDFDRFK+MLAKIKRAG+VRQELAKLK+
Subjt:  NDFDRFKLMLAKIKRAGLVRQELAKLKK

Q9T043 60S ribosomal protein L14-21.7e-5384.38Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL
        FKRYVEIGRVALVNYGED+GKLVVIVDV+D NRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM  ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKRAGLVRQELAKLKK
        NDFDRFK+MLAKIK+AG+VRQELAKLKK
Subjt:  NDFDRFKLMLAKIKRAGLVRQELAKLKK

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L144.7e-5483.59Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL
        FKR+VEIGRVALVNYGEDYGKLVVIVDV+D NRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM  ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKRAGLVRQELAKLKK
        NDFDRFK+MLAKIKRAG+VRQELAKLK+
Subjt:  NDFDRFKLMLAKIKRAGLVRQELAKLKK

AT4G27090.1 Ribosomal protein L141.2e-5484.38Show/hide
Query:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL
        FKRYVEIGRVALVNYGED+GKLVVIVDV+D NRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM  ADV+ KWE SSWGRKL+V+KRRA+L
Subjt:  FKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASL

Query:  NDFDRFKLMLAKIKRAGLVRQELAKLKK
        NDFDRFK+MLAKIK+AG+VRQELAKLKK
Subjt:  NDFDRFKLMLAKIKRAGLVRQELAKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGTTCAAGAGGTACGTTGAGATCGGGAGGGTCGCTCTCGTCAACTACGGCGAAGACTACGGAAAGCTCGTCGTCATTGTCGATGTCATTGACCATAACAGAGCTTTGGT
GGATGCTCCTGATATGGTCAGATCACAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAACTCATTGAAGCTA
TGAGCGCTGCTGATGTCCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTGCTCGTGAAGAAAAGAAGAGCATCACTTAATGATTTTGATAGGTTCAAGCTAATG
TTGGCCAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCGAAACTGAAAAAGAGTGAATCT
mRNA sequenceShow/hide mRNA sequence
CCGTTCAAGAGGTACGTTGAGATCGGGAGGGTCGCTCTCGTCAACTACGGCGAAGACTACGGAAAGCTCGTCGTCATTGTCGATGTCATTGACCATAACAGAGCTTTGGT
GGATGCTCCTGATATGGTCAGATCACAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGGGTCCCTAGGAAGAAGGAACTCATTGAAGCTA
TGAGCGCTGCTGATGTCCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTGCTCGTGAAGAAAAGAAGAGCATCACTTAATGATTTTGATAGGTTCAAGCTAATG
TTGGCCAAGATAAAGAGAGCTGGATTGGTGAGGCAAGAGCTTGCGAAACTGAAAAAGAGTGAATCT
Protein sequenceShow/hide protein sequence
PFKRYVEIGRVALVNYGEDYGKLVVIVDVIDHNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMSAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLM
LAKIKRAGLVRQELAKLKKSES