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MS010424 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010424
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationscaffold878:795423..795653
RNA-Seq ExpressionMS010424
SyntenyMS010424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049218.1 uncharacterized protein E6C27_scaffold171G004580 [Cucumis melo var. makuwa]4.0e-3190.79Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

KAE8650324.1 hypothetical protein Csa_010690 [Cucumis sativus]2.0e-3090.67Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR
        GDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPR
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR

XP_008438474.1 PREDICTED: uncharacterized protein LOC103483558 isoform X1 [Cucumis melo]1.4e-3190.91Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPR
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR

XP_008438475.1 PREDICTED: uncharacterized protein LOC103483558 isoform X2 [Cucumis melo]4.0e-3190.79Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]4.0e-3190.79Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        MDGDSKDVNGC+EK +DS A GEVGDHSNGE+YSESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein3.6e-3090.54Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        GDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

A0A1S3AWG0 uncharacterized protein LOC103483558 isoform X16.6e-3290.91Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQPR
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR

A0A1S3AX40 uncharacterized protein LOC103483558 isoform X21.9e-3190.79Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

A0A5A7U1V8 Uncharacterized protein1.9e-3190.79Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        MDGDSKDVNGC+EK +DS AAGEVGDHSNGE+YSESNALLPPRRGGMSRK +KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

A0A6J1EBY1 uncharacterized protein LOC1114317932.2e-2785.53Show/hide
Query:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        M GDS+ VNG  E+ VDS AAGEVGDH NGED SESNALLPPRRGGMSRKS+KPRMKVRWNDSNGNNLAEILEFQP
Subjt:  MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33390.1 unknown protein2.5e-1548.65Show/hide
Query:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP
        G+ K+ NGC+ K + S+ + E+ D    E+ SES  LLPPR+GGMSR +DK +  V+WND  G+NLAE+L ++P
Subjt:  GDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGCGATTCTAAGGACGTTAATGGCTGCCAAGAGAAGCCCGTGGATTCTGTCGCCGCCGGAGAAGTTGGGGATCACAGTAATGGAGAAGATTACAGCGAATCGAA
TGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGCGGAAATCGGACAAGCCGAGGATGAAAGTCCGGTGGAACGATAGTAATGGCAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGCGATTCTAAGGACGTTAATGGCTGCCAAGAGAAGCCCGTGGATTCTGTCGCCGCCGGAGAAGTTGGGGATCACAGTAATGGAGAAGATTACAGCGAATCGAA
TGCCCTATTGCCGCCGCGCCGCGGTGGAATGTCGCGGAAATCGGACAAGCCGAGGATGAAAGTCCGGTGGAACGATAGTAATGGCAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGG
Protein sequenceShow/hide protein sequence
MDGDSKDVNGCQEKPVDSVAAGEVGDHSNGEDYSESNALLPPRRGGMSRKSDKPRMKVRWNDSNGNNLAEILEFQPR