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MS010462 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010462
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter-like protein
Genome locationscaffold94:168869..169027
RNA-Seq ExpressionMS010462
SyntenyMS010462
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR003439 - ABC transporter-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577104.1 ABC transporter G family member 14, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

XP_022136382.1 ABC transporter G family member 14 [Momordica charantia]8.3e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

XP_022931516.1 ABC transporter G family member 14-like [Cucurbita moschata]8.3e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

XP_022985009.1 ABC transporter G family member 14-like [Cucurbita maxima]8.3e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

XP_023551788.1 ABC transporter G family member 14-like [Cucurbita pepo subsp. pepo]8.3e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

TrEMBL top hitse value%identityAlignment
A0A1Q3CGA6 ABC_tran domain-containing protein/ABC2_membrane domain-containing protein5.2e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAM+GPSGSGKTTLL ALG  L    SGKITYN HPFSSA KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF

A0A5N6R464 ABC transporter domain-containing protein8.9e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFSS  KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

A0A6J1C5D5 ABC transporter G family member 144.0e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

A0A6J1ETV2 ABC transporter G family member 14-like4.0e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

A0A6J1JC33 ABC transporter G family member 14-like4.0e-1273.68Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKTTLL ALG      LSGKITYN HPFS A+KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSH----LSGKITYNAHPFSSASKRCTGLIAQDYVLF

SwissProt top hitse value%identityAlignment
Q7XA72 ABC transporter G family member 212.1e-1057.89Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF
        E+LAMLGPSGSGKTTL+ AL   L GK    ++YN  PF+S+ KR TG + QD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF

Q9C6W5 ABC transporter G family member 141.5e-1164.91Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF
        E LAMLGPSGSGKTTLL ALG  L    SGK+ YN  PFS   KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF

Q9FT51 ABC transporter G family member 271.3e-0750Show/hide
Query:  EILAMLGPSGSGKTTLLIALG-----SHLSGKITYNAHPFSSASKRCTGLIAQDYVLF
        E+LA++GPSGSGKTTLL ALG      ++ G ++YN  P+S   K   G + QD VLF
Subjt:  EILAMLGPSGSGKTTLLIALG-----SHLSGKITYNAHPFSSASKRCTGLIAQDYVLF

Q9LK50 ABC transporter G family member 262.6e-0855.36Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHLS----GKITYNAHPFSSASKRCTGLIAQDYVL
        EILA++GPSGSGKTTLL  +G  L+    GK+TYN  P+S + KR  G + QD VL
Subjt:  EILAMLGPSGSGKTTLLIALGSHLS----GKITYNAHPFSSASKRCTGLIAQDYVL

Q9SZR9 ABC transporter G family member 91.8e-0956.67Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH-------LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKT+LL ALG         L+G I+YN  P S A KR TG + QD  L+
Subjt:  EILAMLGPSGSGKTTLLIALGSH-------LSGKITYNAHPFSSASKRCTGLIAQDYVLF

Arabidopsis top hitse value%identityAlignment
AT1G31770.1 ATP-binding cassette 141.0e-1264.91Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF
        E LAMLGPSGSGKTTLL ALG  L    SGK+ YN  PFS   KR TG +AQD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHL----SGKITYNAHPFSSASKRCTGLIAQDYVLF

AT3G13220.1 ABC-2 type transporter family protein1.8e-0955.36Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHLS----GKITYNAHPFSSASKRCTGLIAQDYVL
        EILA++GPSGSGKTTLL  +G  L+    GK+TYN  P+S + KR  G + QD VL
Subjt:  EILAMLGPSGSGKTTLLIALGSHLS----GKITYNAHPFSSASKRCTGLIAQDYVL

AT3G25620.1 ABC-2 type transporter family protein1.5e-1157.89Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF
        E+LAMLGPSGSGKTTL+ AL   L GK    ++YN  PF+S+ KR TG + QD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF

AT3G25620.2 ABC-2 type transporter family protein1.5e-1157.89Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF
        E+LAMLGPSGSGKTTL+ AL   L GK    ++YN  PF+S+ KR TG + QD VL+
Subjt:  EILAMLGPSGSGKTTLLIALGSHLSGK----ITYNAHPFSSASKRCTGLIAQDYVLF

AT4G27420.1 ABC-2 type transporter family protein1.3e-1056.67Show/hide
Query:  EILAMLGPSGSGKTTLLIALGSH-------LSGKITYNAHPFSSASKRCTGLIAQDYVLF
        EILAMLGPSGSGKT+LL ALG         L+G I+YN  P S A KR TG + QD  L+
Subjt:  EILAMLGPSGSGKTTLLIALGSH-------LSGKITYNAHPFSSASKRCTGLIAQDYVLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATCCTTGCCATGCTCGGCCCTTCCGGCAGCGGTAAAACCACCCTCCTCATTGCCCTTGGCAGCCACCTCTCCGGCAAAATCACCTACAATGCCCACCCGTTCTCTAG
TGCCTCCAAGCGCTGCACCGGCCTCATCGCCCAAGACTACGTTCTCTTT
mRNA sequenceShow/hide mRNA sequence
GAAATCCTTGCCATGCTCGGCCCTTCCGGCAGCGGTAAAACCACCCTCCTCATTGCCCTTGGCAGCCACCTCTCCGGCAAAATCACCTACAATGCCCACCCGTTCTCTAG
TGCCTCCAAGCGCTGCACCGGCCTCATCGCCCAAGACTACGTTCTCTTT
Protein sequenceShow/hide protein sequence
EILAMLGPSGSGKTTLLIALGSHLSGKITYNAHPFSSASKRCTGLIAQDYVLF