; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010470 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010470
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein SKIP23-like
Genome locationscaffold94:278598..279434
RNA-Seq ExpressionMS010470
SyntenyMS010470
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008350478.1 F-box protein SKIP23-like [Malus domestica]2.3e-4437.04Show/hide
Query:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N + R F+N+ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSL---APSNDFVAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP ++ +D +  G EY L  P   +  +S  ++   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSL---APSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + ++  D I  +G  YAV+  G + VC ++      V + ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

XP_008377114.1 F-box protein SKIP23-like [Malus domestica]1.0e-4437.04Show/hide
Query:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN
        DWT LP +L   ++  L  Y DY+RFR V  SW   +P+ P H    +P LM+P    N + R F+N+ N +V++L LP+ +++K   GSS+GWLV LD 
Subjt:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQK-YIGSSNGWLVTLDN

Query:  GLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSL---APSNDFVAVAIYDSSDKLAFTKFGDDKWT
          ++ L+NPLT+++  LPP+S+FP ++ +D ++ G EY L+ P   +  +S  ++   +++K+VLSS    A    F AVAI + +  LAF + GD  WT
Subjt:  GLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSL---APSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER
         I  + ++  D +  DG  YAV+  G +  C ++      V L ++ P+LE     YLV +  DLL+V R
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVER

XP_022155366.1 F-box protein SKIP23-like [Momordica charantia]3.7e-15194.27Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        M +WT+LPTDLLLQVA YLD YTDYVRFRAVRRSWG VLPRQP+HSYYNIPCLMIPYHPHN NLRGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPP SSFPGIIGYDPNNQGEEYTLLRPMDKIN KSRARVHGEYIRKIVLSSLAPSNDF+AVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
        STSLN+FHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLY+VETNGDLLMVERLS YMA+FNRG
Subjt:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

XP_022155372.1 F-box protein SKIP23-like [Momordica charantia]1.0e-15396.06Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        MADWTDLPTDLLLQVA YLDAYTDYVRFRAVRRSWG VLPRQP+HSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKIN KSRARVHGEYIRKIVLSSLAPSNDF+AVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
        STSLN+FHDCIYFDGKIYAVNVLGDLGVCSID TPTQLVNLPLKRPKLEVTSKLYLVETNGD+LMVERLS YMA+FNRG
Subjt:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

XP_022156879.1 putative F-box protein At4g17565 [Momordica charantia]5.6e-5145.74Show/hide
Query:  WTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL
        W DLP D+L  + ++L+  +DY+RFRAV  S    LP+ P+H YY +P LMIP+   +   RGF+N LNQ++Y  +L +++  + +GSSNGWLV LDN  
Subjt:  WTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL

Query:  TLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAISTS
        TL+L NPLTK QLQLP  SSFP     DP      Y +  P  +I+ ++   V   Y+ KI L  L   + F+AVAIY+   K+AFTK GDDKWTAI TS
Subjt:  TLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAISTS

Query:  LNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
             DCI F  KIYA+    DL V  IDD PTQ+  + +K      R +L + S LYLV  + +LLMVERL     +  RG
Subjt:  LNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

TrEMBL top hitse value%identityAlignment
A0A5A7VGI0 F-box protein SKIP23-like1.4e-4438.52Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IGSSNGWLVTL
        MADWT+LP DLL Q++DYL  Y+DY+RFR V +SW   +P+ P      +PCL+IP   ++D   G +N  + ++++L LP+ + +K   GSS+GWL  L
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IGSSNGWLVTL

Query:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPS--NDFVAVAIYDSSDKLAFTKFGDDKW
        D   ++ LLNPLT+++ +LPP+S+FP ++ +D +  G EY +  P   I  ++  ++   +++KIVLSS +PS  NDF+AVAI + S  LAF + G   W
Subjt:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPS--NDFVAVAIYDSSDKLAFTKFGDDKW

Query:  TAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKL-YLVETNGDLLMVERLSMYMAIFNRG
        T +  + +   D IY DG  YAV+     GV S+ D       + L   + ++   + YLV    +LL+V R   Y+ I N G
Subjt:  TAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKL-YLVETNGDLLMVERLSMYMAIFNRG

A0A6J1DP54 F-box protein SKIP23-like5.0e-15496.06Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        MADWTDLPTDLLLQVA YLDAYTDYVRFRAVRRSWG VLPRQP+HSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKIN KSRARVHGEYIRKIVLSSLAPSNDF+AVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
        STSLN+FHDCIYFDGKIYAVNVLGDLGVCSID TPTQLVNLPLKRPKLEVTSKLYLVETNGD+LMVERLS YMA+FNRG
Subjt:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

A0A6J1DRH7 F-box protein SKIP23-like1.8e-15194.27Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD
        M +WT+LPTDLLLQVA YLD YTDYVRFRAVRRSWG VLPRQP+HSYYNIPCLMIPYHPHN NLRGFYNVLNQQVYYLELPQLTNQKYIGSS GWLVTLD
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLD

Query:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI
        NGLTLQLLNPLTKSQLQLPP SSFPGIIGYDPNNQGEEYTLLRPMDKIN KSRARVHGEYIRKIVLSSLAPSNDF+AVAIYDSSDKLAFTKFGDDKWTAI
Subjt:  NGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAI

Query:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
        STSLN+FHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLY+VETNGDLLMVERLS YMA+FNRG
Subjt:  STSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

A0A6J1DUW8 putative F-box protein At4g175652.7e-5145.74Show/hide
Query:  WTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL
        W DLP D+L  + ++L+  +DY+RFRAV  S    LP+ P+H YY +P LMIP+   +   RGF+N LNQ++Y  +L +++  + +GSSNGWLV LDN  
Subjt:  WTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGL

Query:  TLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAISTS
        TL+L NPLTK QLQLP  SSFP     DP      Y +  P  +I+ ++   V   Y+ KI L  L   + F+AVAIY+   K+AFTK GDDKWTAI TS
Subjt:  TLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAISTS

Query:  LNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG
             DCI F  KIYA+    DL V  IDD PTQ+  + +K      R +L + S LYLV  + +LLMVERL     +  RG
Subjt:  LNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLK------RPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG

E5GCD1 Ubiquitin-protein ligase1.4e-4438.52Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IGSSNGWLVTL
        MADWT+LP DLL Q++DYL  Y+DY+RFR V +SW   +P+ P      +PCL+IP   ++D   G +N  + ++++L LP+ + +K   GSS+GWL  L
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IGSSNGWLVTL

Query:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPS--NDFVAVAIYDSSDKLAFTKFGDDKW
        D   ++ LLNPLT+++ +LPP+S+FP ++ +D +  G EY +  P   I  ++  ++   +++KIVLSS +PS  NDF+AVAI + S  LAF + G   W
Subjt:  DNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPS--NDFVAVAIYDSSDKLAFTKFGDDKW

Query:  TAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKL-YLVETNGDLLMVERLSMYMAIFNRG
        T +  + +   D IY DG  YAV+     GV S+ D       + L   + ++   + YLV    +LL+V R   Y+ I N G
Subjt:  TAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKL-YLVETNGDLLMVERLSMYMAIFNRG

SwissProt top hitse value%identityAlignment
Q3EBZ2 F-box protein SKIP232.4e-1228.08Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-GCVLPRQPQHSYYNIPCLMIPYHPHN------DNLRGFYNVLNQQVYYLELPQLTNQKYIGS-S
        M DW+ LP DLL  ++  L++  D ++FR+V  SW     P+ P      +P   +P  P N      D+  GF   L+Q+   L  P   ++  I S S
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-GCVLPRQPQHSYYNIPCLMIPYHPHN------DNLRGFYNVLNQQVYYLELPQLTNQKYIGS-S

Query:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGIIG---YDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSND--FVAVAIYDS
         GWL+ ++  L     + LL+PL  ++  +P   +FP ++    +     G E+ L       +I     V   Y+ K V+  L    D  FV + I+  
Subjt:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGIIG---YDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSND--FVAVAIYDS

Query:  SDKLAFTKFGDDKWTAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAI
        S KLA  +  D  WT I+   + + D + FDG+ +AV+  G   V         LV  P+         K +L+E+ G++L+V+   MY+++
Subjt:  SDKLAFTKFGDDKWTAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAI

Q9FLP7 Putative F-box protein At5g551505.0e-1025Show/hide
Query:  ADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYN---IPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT
        + W++   +LL  V   L+   D +    V  SW           YY+    P L I +   N+ +R      + Q   L   +L    + G+   W+  
Subjt:  ADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYN---IPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT

Query:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT
          + L   L  P+TKS   LPP+ SF            E+   L     I   S A  +  +I+K V S+    +++V + IY++  KLAF + GD +WT
Subjt:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV
         + +  +   D ++ +G  +A++ LG++  C +     +   L    P    + K YL E++ D L V
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV

Q9LS04 Putative F-box protein At3g257505.2e-0722.91Show/hide
Query:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG
        +W+DLP +LL  +A+   +  D +R R+  +SW   +    +   +        Y P   N +   ++     + + LP     K      GWLV     
Subjt:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG

Query:  ----LTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT
              + LL PL+  ++     +     +G     Q  E  +   +    I   + +   YI+         S+   +V  +D+      T+ G   WT
Subjt:  ----LTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSM
         I   +  F D I   G+IYAV++ G +   S+       Q  + PL   K +      LVE  GDL +V  LS+
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSM

Arabidopsis top hitse value%identityAlignment
AT1G65770.1 ascorbic acid mannose pathway regulator 11.1e-0427.42Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMI----PYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWL
        MADW+ LP DLL  +A  L +  +  RFR++ RSW   +P   + + +    L++    P  P  D+ R    +     + + L           S GWL
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMI----PYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWL

Query:  VTLDNGLT---LQLLNPLTKSQLQ
        +  D  ++   L LL+PL++  ++
Subjt:  VTLDNGLT---LQLLNPLTKSQLQ

AT2G03560.1 F-box family protein with a domain of unknown function (DUF295)1.9e-0424.32Show/hide
Query:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-----GCV-LPRQP-----QHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IG
        DW+ L  D+L ++ + L +  D+ R + V   W      CV  P +P     +  YY    LM+ + P  D +            Y  L  ++++ Y + 
Subjt:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-----GCV-LPRQP-----QHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKY-IG

Query:  SSNGWLVTLDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEY---TLLRPMDKIN-IKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDK
        SS  WL+  D+ L   ++N LT  ++ LPP+ S   I G        +Y   +     D  N I+   +   E  R  VL     + D+    I+ +   
Subjt:  SSNGWLVTLDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEY---TLLRPMDKIN-IKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDK

Query:  LAFTKFGDDKWT-AISTSLNHFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERL
        L   K GDD W      +   + D  Y + K+Y  N           GD     I++ P    N PL   + P   + SK   ++ +G++L++ R+
Subjt:  LAFTKFGDDKWT-AISTSLNHFHDCIYFDGKIYAVNV---------LGDLGVCSIDDTPTQLVNLPL---KRPKLEVTSKLYLVETNGDLLMVERL

AT2G17030.1 F-box family protein with a domain of unknown function (DUF295)1.7e-1328.08Show/hide
Query:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-GCVLPRQPQHSYYNIPCLMIPYHPHN------DNLRGFYNVLNQQVYYLELPQLTNQKYIGS-S
        M DW+ LP DLL  ++  L++  D ++FR+V  SW     P+ P      +P   +P  P N      D+  GF   L+Q+   L  P   ++  I S S
Subjt:  MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSW-GCVLPRQPQHSYYNIPCLMIPYHPHN------DNLRGFYNVLNQQVYYLELPQLTNQKYIGS-S

Query:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGIIG---YDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSND--FVAVAIYDS
         GWL+ ++  L     + LL+PL  ++  +P   +FP ++    +     G E+ L       +I     V   Y+ K V+  L    D  FV + I+  
Subjt:  NGWLVTLDNGLT----LQLLNPLTKSQLQLPPISSFPGIIG---YDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSND--FVAVAIYDS

Query:  SDKLAFTKFGDDKWTAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAI
        S KLA  +  D  WT I+   + + D + FDG+ +AV+  G   V         LV  P+         K +L+E+ G++L+V+   MY+++
Subjt:  SDKLAFTKFGDDKWTAISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAI

AT3G25750.1 F-box family protein with a domain of unknown function (DUF295)4.5e-0622.55Show/hide
Query:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG
        +W+DLP +LL  +A+   +  D +R R+  +SW   +    +   +        Y P   N +   ++     + + LP     K      GWLV     
Subjt:  DWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNG

Query:  ----LTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT
              + LL PL+  ++     +     +G     Q  E  +   +    I   + +   YI+                    +SDK+     G   WT
Subjt:  ----LTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSM
         I   +  F D I   G+IYAV++ G +   S+       Q  + PL   K +      LVE  GDL +V  LS+
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTP--TQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSM

AT5G55150.1 Protein of unknown function (DUF295)3.5e-1125Show/hide
Query:  ADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYN---IPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT
        + W++   +LL  V   L+   D +    V  SW           YY+    P L I +   N+ +R      + Q   L   +L    + G+   W+  
Subjt:  ADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYN---IPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVT

Query:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT
          + L   L  P+TKS   LPP+ SF            E+   L     I   S A  +  +I+K V S+    +++V + IY++  KLAF + GD +WT
Subjt:  LDNGLTLQLLNPLTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWT

Query:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV
         + +  +   D ++ +G  +A++ LG++  C +     +   L    P    + K YL E++ D L V
Subjt:  AISTSLNHFHDCIYFDGKIYAVNVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTGGACCGATCTTCCTACTGATCTCCTACTCCAAGTTGCAGATTATTTAGATGCGTACACCGATTACGTTCGATTTCGAGCAGTTCGTCGATCGTGGGGGTG
CGTTTTGCCGAGGCAACCCCAACACTCGTACTACAACATCCCATGCCTCATGATTCCCTACCATCCTCACAATGACAATCTTCGAGGTTTCTACAATGTTTTAAACCAAC
AAGTTTACTACTTGGAGTTGCCTCAACTTACCAATCAAAAATACATTGGCTCTTCCAATGGTTGGTTAGTGACTTTGGATAATGGTTTGACATTGCAACTCTTGAATCCT
CTTACCAAGTCTCAACTCCAACTCCCTCCCATATCTTCATTTCCTGGCATCATAGGGTATGATCCTAATAATCAGGGAGAAGAGTATACTCTTCTTCGTCCTATGGATAA
GATCAATATCAAAAGTCGAGCTCGTGTCCATGGCGAATATATAAGGAAAATTGTTTTGTCCTCTCTCGCGCCTTCAAATGATTTCGTGGCTGTCGCCATATATGATTCAT
CCGACAAGTTGGCTTTTACTAAGTTTGGGGATGATAAATGGACTGCAATTTCTACATCATTGAATCATTTTCATGATTGCATATATTTTGACGGAAAAATTTATGCAGTA
AATGTTCTCGGAGACCTAGGGGTCTGTTCCATCGACGACACTCCGACCCAGCTGGTAAACTTGCCCTTAAAACGACCTAAGTTGGAGGTGACATCTAAGTTGTATCTGGT
TGAAACAAATGGTGATCTGTTGATGGTTGAAAGGCTTTCAATGTACATGGCTATTTTTAATAGAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTGGACCGATCTTCCTACTGATCTCCTACTCCAAGTTGCAGATTATTTAGATGCGTACACCGATTACGTTCGATTTCGAGCAGTTCGTCGATCGTGGGGGTG
CGTTTTGCCGAGGCAACCCCAACACTCGTACTACAACATCCCATGCCTCATGATTCCCTACCATCCTCACAATGACAATCTTCGAGGTTTCTACAATGTTTTAAACCAAC
AAGTTTACTACTTGGAGTTGCCTCAACTTACCAATCAAAAATACATTGGCTCTTCCAATGGTTGGTTAGTGACTTTGGATAATGGTTTGACATTGCAACTCTTGAATCCT
CTTACCAAGTCTCAACTCCAACTCCCTCCCATATCTTCATTTCCTGGCATCATAGGGTATGATCCTAATAATCAGGGAGAAGAGTATACTCTTCTTCGTCCTATGGATAA
GATCAATATCAAAAGTCGAGCTCGTGTCCATGGCGAATATATAAGGAAAATTGTTTTGTCCTCTCTCGCGCCTTCAAATGATTTCGTGGCTGTCGCCATATATGATTCAT
CCGACAAGTTGGCTTTTACTAAGTTTGGGGATGATAAATGGACTGCAATTTCTACATCATTGAATCATTTTCATGATTGCATATATTTTGACGGAAAAATTTATGCAGTA
AATGTTCTCGGAGACCTAGGGGTCTGTTCCATCGACGACACTCCGACCCAGCTGGTAAACTTGCCCTTAAAACGACCTAAGTTGGAGGTGACATCTAAGTTGTATCTGGT
TGAAACAAATGGTGATCTGTTGATGGTTGAAAGGCTTTCAATGTACATGGCTATTTTTAATAGAGGT
Protein sequenceShow/hide protein sequence
MADWTDLPTDLLLQVADYLDAYTDYVRFRAVRRSWGCVLPRQPQHSYYNIPCLMIPYHPHNDNLRGFYNVLNQQVYYLELPQLTNQKYIGSSNGWLVTLDNGLTLQLLNP
LTKSQLQLPPISSFPGIIGYDPNNQGEEYTLLRPMDKINIKSRARVHGEYIRKIVLSSLAPSNDFVAVAIYDSSDKLAFTKFGDDKWTAISTSLNHFHDCIYFDGKIYAV
NVLGDLGVCSIDDTPTQLVNLPLKRPKLEVTSKLYLVETNGDLLMVERLSMYMAIFNRG