CuGenDBv2

Gene ID	MS010471
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Chlororespiratory reduction 3
Genome location	scaffold94:288222..290165
RNA-Seq Expression	MS010471
Synteny	MS010471
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0010598 - NAD(P)H dehydrogenase complex (plastoquinone) (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR038931 - Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600832.1 putative NAD(P)H dehydrogenase subunit CRR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-65

84.05

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP
        +A FSCISVTKNVA+ASLN SDDSHSP PK NG A TIPI N    RRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRK  FDMFL+SFT KYEG 
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP

Query:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL
        LMKKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+LL
Subjt:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL

XP_022155388.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Momordica charantia]

2.1e-82

98.77

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGPL
        LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRKTVFDMFLLSFTEKYEGPL
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

XP_022942899.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita moschata]

1.4e-65

84.05

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP
        +A FSCISVTKNVA+ASLN SDDSHSP PK NG A TIPI N    RRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRK  FDMFL+SFT KYEG 
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP

Query:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL
        LMKKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+LL
Subjt:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL

XP_023511915.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Cucurbita pepo subsp. pepo]

3.6e-66

84.66

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP
        +A F CISVTKNVALASLN SDDSHSP PK NG A+TIPIKN    RRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRK  FDMFL+SFT KYEG 
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP

Query:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL
        LMKKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+LL
Subjt:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL

XP_038893324.1 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic [Benincasa hispida]

9.5e-67

82.93

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP
        +ASF  IS+TKNV LASLN  DDSHSP PK NG A+TIPI N    RRLPKPRRPSVIEIERAIG GRFRDADPR  LEEDRK  FDMFL+SFT KYEGP
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP

Query:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        +MKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASG+IKLPF+TPFL+ELLM
Subjt:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJA3 Uncharacterized protein

8.7e-58

77.11

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSP--KPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYE
        +AS   IS TKNVA ASLN    SHS SP  K N  A TIPI N    R+L  P RPS+IEIERAIG GRFRDADPR+ LEED+K  FDMFL+SFT KYE
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSP--KPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYE

Query:  GPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
         PLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASGVIKLPFSTPFL+ELLM
Subjt:  GPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

A0A1S3CM65 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic isoform X1

5.4e-60

77.98

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Query:  LASFSCISVTKNVALASLN----GSDDSHSPSPKPNGTADTIPIKNSPHR-RLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEK
        +AS   IS+TKNVALASLN        SHSP  K N  ADTIPIK    R +L  PRRPSVIEIERAIG GRFRDADPR  LEED+K  FDMFL+SFT K
Subjt:  LASFSCISVTKNVALASLN----GSDDSHSPSPKPNGTADTIPIKNSPHR-RLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEK

Query:  YEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        YEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQW+LPIWALSLLVASGVIKLPF+TPFL+ELLM
Subjt:  YEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

A0A6J1DQ49 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

1.0e-82

98.77

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGPL
        LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRKTVFDMFLLSFTEKYEGPL
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGPL

Query:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
Subjt:  MKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

A0A6J1FSN9 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

6.6e-66

84.05

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP
        +A FSCISVTKNVA+ASLN SDDSHSP PK NG A TIPI N    RRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRK  FDMFL+SFT KYEG 
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP-HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGP

Query:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL
        LMKKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+LL
Subjt:  LMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL

A0A6J1J6W0 probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

1.5e-65

81.93

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP----HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKY
        +A F CISVTKNVALASLN SDDSHSP PK NG A+TIP+ N       RRLPKPRRPSVIEIERAIGAGRFRDADPR  LEEDRK  FDMFL+SFT KY
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSP----HRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKY

Query:  EGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL
        EG LMKKLRETGEWVT+QTETKFQASGK FLLFTFQW+LPIWA SLLVASGVIKLPF+TPFLD+LL
Subjt:  EGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELL

SwissProt top hits

e value

%identity

Alignment

Q9ZVE7 Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic

2.0e-27

42.46

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Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPR----------------RPSVIEIERAIGAGRFRDADPRQGLEEDRKTV
        L++   I+      +ASL     + SPSP P+ +   +P   SP ++  K R                +PS+ +IERA G+G +RD++     E D  TV
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPR----------------RPSVIEIERAIGAGRFRDADPRQGLEEDRKTV

Query:  FDMFLLSFTEKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        FD  LL    K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFLD+L+M
Subjt:  FDMFLLSFTEKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

Arabidopsis top hits

e value

%identity

Alignment

AT2G01590.1 chlororespiratory reduction 3

1.4e-28

42.46

Show/hide

Query:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPR----------------RPSVIEIERAIGAGRFRDADPRQGLEEDRKTV
        L++   I+      +ASL     + SPSP P+ +   +P   SP ++  K R                +PS+ +IERA G+G +RD++     E D  TV
Subjt:  LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPR----------------RPSVIEIERAIGAGRFRDADPRQGLEEDRKTV

Query:  FDMFLLSFTEKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM
        FD  LL    K+E  + KKLRE GE    +TE K ++SGK  L+FT QW+LPIW +SLLVA GVIKLPFS PFLD+L+M
Subjt:  FDMFLLSFTEKYEGPLMKKLRETGEWVTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

Sequences

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CDS sequence

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TTGGCTTCCTTCTCCTGCATTTCTGTGACCAAAAATGTTGCTCTCGCCTCTCTCAATGGCAGCGACGACTCGCACTCTCCTTCTCCCAAACCCAATGGCACCGCCGACAC
CATTCCGATCAAGAATTCACCGCACCGCCGCCTGCCAAAACCGCGCCGCCCCTCCGTCATTGAAATCGAACGCGCTATTGGCGCCGGAAGGTTCAGAGACGCCGACCCTA
GGCAAGGATTGGAAGAAGATAGGAAGACTGTATTTGATATGTTTTTACTGAGTTTTACGGAAAAATATGAGGGGCCACTCATGAAAAAGCTTCGTGAGACAGGGGAATGG
GTAACCAATCAAACTGAAACCAAATTTCAAGCTTCGGGAAAATGGTTTCTGCTGTTTACATTTCAATGGCTTCTACCAATTTGGGCATTGTCACTTCTTGTGGCTTCTGG
TGTCATTAAGCTACCATTCAGCACTCCATTTCTTGATGAACTTCTTATG

mRNA sequence

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Protein sequence

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LASFSCISVTKNVALASLNGSDDSHSPSPKPNGTADTIPIKNSPHRRLPKPRRPSVIEIERAIGAGRFRDADPRQGLEEDRKTVFDMFLLSFTEKYEGPLMKKLRETGEW
VTNQTETKFQASGKWFLLFTFQWLLPIWALSLLVASGVIKLPFSTPFLDELLM

MS010471 (gene) of Bitter gourd (TR) v1 genome