CuGenDBv2

Gene ID	MS010483
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	trafficking protein particle complex subunit 12
Genome location	scaffold35:6612..7766
RNA-Seq Expression	MS010483
Synteny	MS010483
Gene Ontology terms	GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6594864.1 Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. sororia]

6.1e-189

89.32

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E+ SPDS T R SD ETL+S IE LTISSDPLT KFSSL++LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        E LAELDSLEDLDSSQYRYE+YPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQEGLDRFYELLDFVQSKL+DK+ K LD SV+LWKKREVFV NCI+G+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCLSLI+NLLSRDFSDPALISKLGYIQMHVGDI+GAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSS TRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

KAG7026829.1 Trafficking protein particle complex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.0e-188

89.06

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E+ SPDS T R SD ETL+S IE LTISSDPLT KFSSL++LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        E LAELDSLEDLDSSQYRYE+YPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQEGLDRFYELLDFVQSK++DK+ K LD SV+LWKKREVFV NCI+G+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCLSLI+NLLSRDFSDPALISKLGYIQMHVGDI+GAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSS TRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

XP_022133008.1 trafficking protein particle complex subunit 12 [Momordica charantia]

2.8e-210

99.74

Show/hide

Query:  MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE
        MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE
Subjt:  MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE

Query:  ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL
        ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL
Subjt:  ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL

Query:  SNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH
        SNKEFSVCLSLI+NLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH
Subjt:  SNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH

Query:  TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
Subjt:  TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

XP_023518819.1 trafficking protein particle complex subunit 12 [Cucurbita pepo subsp. pepo]

3.0e-188

89.06

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E  SPDS T R SD+ETL+S IEELTISSDPLT KFSSL++LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        E LAELDSLEDLDSSQYRYE+YPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQEGLDR YELLDFVQSK++DK+ K LD SV+LWKKREVFV NCI+G+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCLSLI+NLLSRDFSDPALISKLGYIQMHVGDI+GAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSS TRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

XP_038882977.1 trafficking protein particle complex subunit 12 [Benincasa hispida]

1.0e-188

89.32

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E  SP+S + R SDSETL+SGIEELTISSDPLT +F SLN+LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHL YLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQ+GLDRFYELLDFVQSK++DKE K LD SVNLWKKR VFV NCIIG+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCL+L+NNLLS DFSDPALISKLGYIQMHVGDI+GAKRSFN+IEEMVKEGKSSGSLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
         +DVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSSSTRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DUA2 trafficking protein particle complex subunit 12

2.1e-187

88.02

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E    SPDS +   SD ETL++GIE LTISSDPLT +F SLN+LAH+LSSLQD A+RGSWRSI DKV+RAR+LSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        EALAELDSLEDL+SSQYRYESYPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQ+GLDRFYELLDFVQSKL+DKE K+LD SVNLWKKREVFV NCIIG+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCL+LINNLLS DFSDPALISKLGYIQMH GDI+GAKRSFNRIEE+VKEGKSSGSLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSSSTRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

A0A5A7SYI2 Trafficking protein particle complex subunit 12

2.1e-187

88.02

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E    SPDS +   SD ETL++GIE LTISSDPLT +F SLN+LAH+LSSLQD A+RGSWRSI DKV+RAR+LSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        EALAELDSLEDL+SSQYRYESYPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQ+GLDRFYELLDFVQSKL+DKE K+LD SVNLWKKREVFV NCIIG+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCL+LINNLLS DFSDPALISKLGYIQMH GDI+GAKRSFNRIEE+VKEGKSSGSLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        ++D+VAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSSSTRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

A0A6J1BXT8 trafficking protein particle complex subunit 12

1.4e-210

99.74

Show/hide

Query:  MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE
        MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE
Subjt:  MEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVE

Query:  ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL
        ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL
Subjt:  ALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHL

Query:  SNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH
        SNKEFSVCLSLI+NLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH
Subjt:  SNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDH

Query:  TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
Subjt:  TDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

A0A6J1HII0 trafficking protein particle complex subunit 12

3.3e-188

89.06

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E  SPDS T R SD ETL+S IE LTISSDPLT KFSSL++LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        E LAELDSLEDLDSSQYRYE+YPSVYPNRTGSMVPFSLRWLHAL+PIKMGERQEGLDRFYELLDFVQSK++DK+ K LD SV+LWKKREVFV NCI+G+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCLSLI+NLLSRDFSDPALISKLGYIQMHVGDI+GAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVF+VGKDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSS TRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

A0A6J1KTF6 trafficking protein particle complex subunit 12

8.0e-187

88.54

Show/hide

Query:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV
        E E  SPDS T R SD ETL+S IE LTISSDPLT KFSSL++LAHELSSLQD A+RGSWRSI DKV+RARSLSLLQKPHDHLTYLS+NVLALVKLRRF 
Subjt:  EMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFV

Query:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH
        E LAELDSLEDLDSSQYRYE+YP VYPNRTGSMVPFSLRWLHAL+PIKMGERQEGLDRFYELLDFVQSK++DK+ K LD SV+LWKKREVFV NCI+G+H
Subjt:  EALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYH

Query:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD
        LSNKEF VCLSLI+NLLSRDFSDPALISKLGYIQMHVGDI+GAKRSFN+IE+MVKEGKSS SLSEVEIKNLVNRNKALVF+V KDYLSAVREYEECIERD
Subjt:  LSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERD

Query:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHS+IKRTLN+WIARVAPDDFDSS TRI
Subjt:  HTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

SwissProt top hits

e value

%identity

Alignment

Q8K2L8 Trafficking protein particle complex subunit 12

2.4e-31

31.13

Show/hide

Query:  DHLTYLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYE--------LLDFVQSKLED
        D L      +  LVKL  F  A  E +   +LD     YE YP VYP R GSMVPFS+R LHA L   +G  QE LDR +         L +  Q   ED
Subjt:  DHLTYLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYE--------LLDFVQSKLED

Query:  KETKRL-----DASVNLWKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLS-RDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEV
             +      ASV LW+ R   V   +    L  K++ + +     ++      +P L+S +G I + +GDI  A++ F  +E++ ++      L  +
Subjt:  KETKRL-----DASVNLWKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLS-RDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEV

Query:  EIKNLVNRNKALVFMVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLN
        + K +V  N+A +++   ++  A + + E +  D T+ VA NN A+CL+YL  L DS++ LE  +++ P   L+E+V+ NL +MYEL        K++L 
Subjt:  EIKNLVNRNKALVFMVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLN

Query:  SWIARVAPDDFDSSSTRI
          +A    D F++   ++
Subjt:  SWIARVAPDDFDSSSTRI

Q8WVT3 Trafficking protein particle complex subunit 12

3.2e-31

29.8

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Query:  SWRSITDKVSR---------ARSLSLLQKPHDHLTYLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKM
        +WR+  D   R          +S  L     D L      +  LVKL  F  A  E +   +LD     YE YP VYP R GSMVPFS+R LHA L   +
Subjt:  SWRSITDKVSR---------ARSLSLLQKPHDHLTYLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKM

Query:  GERQEGLDRFYE--------LLDFVQSKLEDKETKRL-----DASVNLWKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLS-RDFSDPALISKLGYIQM
        G  QE LDR ++        L +  Q   ED     +      AS+ LW+ R   V   +    L  K++ + +   ++++      +P L+S +G I +
Subjt:  GERQEGLDRFYE--------LLDFVQSKLEDKETKRL-----DASVNLWKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLS-RDFSDPALISKLGYIQM

Query:  HVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVP
         +GDI  A++ F  +E++ ++      L  ++ K +V  N A + +   ++  A R + E +  D  + VA NN A+CL+YL  L DS++ LE  +++ P
Subjt:  HVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVP

Query:  TVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
           L+E+V+ NL +MYEL        K+ L   +A    D F++   ++
Subjt:  TVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

Arabidopsis top hits

e value

%identity

Alignment

AT4G39820.1 Tetratricopeptide repeat (TPR)-like superfamily protein

9.8e-137

58.75

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Query:  MEMESPDSQTQ-RISDSETLSSGIEELTISSDPLTC----------------KFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLT
        M+ + P+S+T+   + S T S+ + E T + +P                   +F+SL+ L H+L SL + ++RGSW++I +K+S+AR+L LL KPH+HLT
Subjt:  MEMESPDSQTQ-RISDSETLSSGIEELTISSDPLTC----------------KFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLT

Query:  YLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNL
        YL++ V+AL KLRR  EA  EL+SL D D + YRYES+P +YPNR GSMVPFSLRWL+AL+P K+G RQEGLDR Y LLDFV+ ++ +KE++ L++SV L
Subjt:  YLSFNVLALVKLRRFVEALAELDSLEDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNL

Query:  WKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGK
        WKKRE FV NC++G+HL +KEF V L L+  L++RD  DP LISKLG +QM  GD++GAK +F+R+E+M+ EGKS+G L+E++  NLV RNKALV++V K
Subjt:  WKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLSRDFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGK

Query:  DYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI
        DY+SAVREY++CIERD++D++A+NNKALCLMYLRDL+D+IKV+E+ALERVPT ALNE+++VNLCSMYELAYVNH+D+KRTLN+WIARVAPDDFDSS TR+
Subjt:  DYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLENALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

Sequences

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CDS sequence

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CGCGAAATGGAAATGGAGTCACCCGATTCTCAGACTCAGAGAATTTCTGATTCCGAAACCCTAAGTTCAGGCATCGAGGAATTGACGATATCGTCGGACCCGCTAACCTG
TAAGTTCAGTTCGCTCAACAATCTAGCCCACGAGCTTTCCTCTCTTCAGGATCACGCGTCCCGTGGATCTTGGCGTTCAATTACAGATAAGGTTTCTAGGGCACGATCTC
TCTCCTTGCTGCAGAAGCCCCATGACCACCTCACCTACCTCTCTTTCAATGTCCTTGCCCTCGTCAAACTCCGTCGTTTCGTGGAAGCTTTGGCGGAGCTCGATTCTCTG
GAAGATCTCGATAGTTCTCAGTACCGGTATGAATCGTATCCAAGTGTGTACCCTAATCGGACCGGCTCGATGGTCCCCTTTTCACTCCGCTGGCTGCACGCCCTGCTCCC
TATCAAAATGGGTGAGCGTCAAGAAGGGTTGGACCGGTTCTACGAACTTCTGGATTTTGTACAGTCAAAATTGGAGGATAAAGAGACGAAAAGGCTCGATGCCTCAGTGA
ATCTGTGGAAGAAAAGGGAAGTGTTTGTGACGAACTGCATTATTGGTTATCATTTGAGTAACAAAGAGTTTTCTGTTTGTTTAAGTCTGATTAATAATTTGCTTAGTCGG
GATTTTTCAGACCCTGCTCTGATTTCAAAACTTGGGTATATCCAAATGCACGTTGGTGATATAGACGGTGCGAAGCGTTCGTTTAATCGGATTGAGGAGATGGTTAAAGA
GGGGAAGAGCAGTGGGTCATTGAGCGAGGTGGAGATTAAAAACCTTGTGAACAGGAACAAGGCGTTGGTGTTTATGGTGGGTAAAGACTATCTATCGGCAGTGAGGGAAT
ACGAGGAGTGCATCGAGAGGGACCATACGGACGTCGTGGCCATTAACAACAAGGCTCTTTGCTTGATGTACTTGCGGGATTTAGCAGATTCCATTAAGGTGTTGGAAAAT
GCTCTGGAAAGAGTTCCCACTGTGGCTCTCAATGAAACAGTGATCGTGAATCTGTGTAGTATGTATGAATTGGCTTACGTTAATCACTCTGATATTAAGAGAACGCTCAA
TAGCTGGATTGCCCGTGTTGCTCCTGATGATTTTGATTCTTCGAGTACTCGGATT

mRNA sequence

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Protein sequence

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REMEMESPDSQTQRISDSETLSSGIEELTISSDPLTCKFSSLNNLAHELSSLQDHASRGSWRSITDKVSRARSLSLLQKPHDHLTYLSFNVLALVKLRRFVEALAELDSL
EDLDSSQYRYESYPSVYPNRTGSMVPFSLRWLHALLPIKMGERQEGLDRFYELLDFVQSKLEDKETKRLDASVNLWKKREVFVTNCIIGYHLSNKEFSVCLSLINNLLSR
DFSDPALISKLGYIQMHVGDIDGAKRSFNRIEEMVKEGKSSGSLSEVEIKNLVNRNKALVFMVGKDYLSAVREYEECIERDHTDVVAINNKALCLMYLRDLADSIKVLEN
ALERVPTVALNETVIVNLCSMYELAYVNHSDIKRTLNSWIARVAPDDFDSSSTRI

MS010483 (gene) of Bitter gourd (TR) v1 genome