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MS010533 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010533
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnucleolar protein 6
Genome locationscaffold35:367041..367145
RNA-Seq ExpressionMS010533
SyntenyMS010533
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152358.1 nucleolar protein 6 [Momordica charantia]4.9e-0579.41Show/hide
Query:  QGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
        +GLKVA GFFVRII TIAGSF+SISKLN+KR+N+
Subjt:  QGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
XP_038874530.1 nucleolar protein 6 [Benincasa hispida]3.2e-0474.29Show/hide
Query:  FQGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
        F+ LKVA GFF+RII TIA SF+SISKLNLKR+N+
Subjt:  FQGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
TrEMBL top hitse value%identityAlignment
A0A6J1DEN5 nucleolar protein 62.4e-0579.41Show/hide
Query:  QGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
        +GLKVA GFFVRII TIAGSF+SISKLN+KR+N+
Subjt:  QGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
A0A6J1IL20 nucleolar protein 6 isoform X17.7e-0481.25Show/hide
Query:  LKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
        LKVA GFFVRII TIA SF+SISKLNLKR+N+
Subjt:  LKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
A0A6J1IT25 nucleolar protein 6 isoform X27.7e-0481.25Show/hide
Query:  LKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
        LKVA GFFVRII TIA SF+SISKLNLKR+N+
Subjt:  LKVAAGFFVRIILTIAGSFYSISKLNLKRHNV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCCAAGGACTCAAGGTAGCTGCTGGATTTTTTGTCAGAATAATTCTAACCATTGCTGGATCCTTCTACAGCATTTCAAAGTTGAATCTTAAACGACACAATGTG
mRNA sequenceShow/hide mRNA sequence
TTCCAAGGACTCAAGGTAGCTGCTGGATTTTTTGTCAGAATAATTCTAACCATTGCTGGATCCTTCTACAGCATTTCAAAGTTGAATCTTAAACGACACAATGTG
Protein sequenceShow/hide protein sequence
FQGLKVAAGFFVRIILTIAGSFYSISKLNLKRHNV