; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010551 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010551
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Genome locationscaffold35:477738..478421
RNA-Seq ExpressionMS010551
SyntenyMS010551
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603959.1 hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia]7.0e-6863.64Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FR TEVF  +AF  W F+ LPL +RVSSDYISQISG+F+S +FGF+LCNTI++ALI+ P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS         IE+    S  L     E  G +  R  VEE EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_022950349.1 uncharacterized protein LOC111453461 [Cucurbita moschata]1.7e-6663.64Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEVF  +AF  W F+ LPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+ P GRLCSD E EEI YEDKEVISEVSS         IE+    S  L     E  G +  R  V E EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_022977278.1 uncharacterized protein LOC111477644 [Cucurbita maxima]2.2e-6964.5Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FRFTEVF  +A   W F+ LPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG+K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS         IE+    S  L     E  G + +R  VEE EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_023543998.1 uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo]2.5e-6562.77Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEV   +AF  W F+ LPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+EP GRLCSD E EEI YEDKEVISEV S         IE+    S  L     E  G    R  V E EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIAREL+FR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_038882287.1 uncharacterized protein LOC120073519 [Benincasa hispida]1.3e-6964.22Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTE++ AMGV   L+I+VKIFRFTEV V + F FW F+ LPL +RVS DYISQIS +F+  VFGF+LCNTI+VALIA P  FSG K++ D+VETE+FNE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G   SLSLPG+EPIGRLCSD  +EEI YEDKEVISEV S    I     ++    S  L     E  G + +RL  EE EAIWGGG S ESVW+GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVLR
        ELSNKEFQ RI+AFIARELRFR EESGAV+LR
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVLR

TrEMBL top hitse value%identityAlignment
A0A0A0KM84 Uncharacterized protein1.6e-6260.94Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGD-SVETEIFN
        MKT E+ AMGV   L+I+VKIFRFTEV V + F  W F+ LPL +RVSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FS  K+  D +VET +FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGD-SVETEIFN

Query:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG
        ELV++G  +SLSL G+EP GRLCSD E+EEI YEDKEVISEV+S    +     E+    S  L  L  E  G +L+R+  EE EAIWGGG+S E V  G
Subjt:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSNKEF+ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A1S3B3G2 uncharacterized protein LOC1034853511.6e-6260.52Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN
        MKTE + AMGV   L+ +VKIFRFTEV   + F  W F+ LPL ++VSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FSG K+ GD+ VETE+FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN

Query:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG
        ELV++G  +SLSL G+EP GRLCSD E+E+I YEDKEVISEV+S    +     EN    S  L  +  E  G +L+RL  EE EAIWGGG+S E V   
Subjt:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSN EFQ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A5A7SYQ4 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm61.6e-6260.52Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN
        MKTE + AMGV   L+ +VKIFRFTEV   + F  W F+ LPL ++VSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FSG K+ GD+ VETE+FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN

Query:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG
        ELV++G  +SLSL G+EP GRLCSD E+E+I YEDKEVISEV+S    +     EN    S  L  +  E  G +L+RL  EE EAIWGGG+S E V   
Subjt:  ELVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLI-----ENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSN EFQ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A6J1GFJ2 uncharacterized protein LOC1114534618.4e-6763.64Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEVF  +AF  W F+ LPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+ P GRLCSD E EEI YEDKEVISEVSS         IE+    S  L     E  G +  R  V E EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

A0A6J1IPH9 uncharacterized protein LOC1114776441.1e-6964.5Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FRFTEVF  +A   W F+ LPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG+K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE
        LVK+G  +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS         IE+    S  L     E  G + +R  VEE EAIWGGG+  ESV  GE
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGL-----IENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34560.1 unknown protein1.5e-0422.33Show/hide
Query:  LRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSG----QKLAGDSVETEIFNELVKNGTGSSL
        +R    +FR  E+ + +     +  S P +V++S D   + + F  S  F F + N IV+ L+A   R+S      K A ++   +++ E +        
Subjt:  LRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSG----QKLAGDSVETEIFNELVKNGTGSSL

Query:  SLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLIENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAFI
         +   +        P   + V   +    +   A   +E+ +G        M   V EK  R+   +K+ +    + V+    G  +SN++F+ +IEAFI
Subjt:  SLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLIENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAFI

Query:  ARELRFRREESGAVV
        AR+ R +++E   ++
Subjt:  ARELRFRREESGAVV

AT5G66440.1 unknown protein3.5e-1731.35Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        +K E+  A+        + + FR  EV V L F FW F+ LP  V++S  ++ +I+   S+ +F F+L N+IVV L+      +   +A  S ETEI+  
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVI-SEVSSAAGLI--ENM---------------------DGSSPGLGCLMPENVGEKLQRLAVE
         V+  +  + S P +E +         E IVY+DK+VI +++ S   L   ENM                     D S      ++   +   LQR   E
Subjt:  LVKNGTGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVI-SEVSSAAGLI--ENM---------------------DGSSPGLGCLMPENVGEKLQRLAVE

Query:  E--KEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREESGAVVL
        +  KE         E  +  ++LSN+EFQ+ IEAFIA++  FRR+ES AVV+
Subjt:  E--KEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREESGAVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAGAGGAAATTGGAGCAATGGGAGTGTGTGGTAATCTCCGAATTTTGGTGAAAATTTTCCGATTTACAGAGGTTTTTGTGGGGCTGGCATTTTTTTTCTGGAT
ATTTAATAGCCTCCCTTTGGCCGTCAGAGTTTCGAGCGATTACATTTCTCAAATATCCGGCTTCTTTTCCAGCTCTGTTTTTGGCTTCGTACTCTGCAACACTATTGTCG
TCGCTCTAATTGCCAACCCCGACCGTTTCTCCGGCCAAAAACTCGCCGGTGACAGTGTTGAAACCGAAATATTTAACGAATTGGTCAAAAACGGCACTGGAAGTTCACTG
TCTTTGCCTGGAAATGAGCCAATTGGCCGGCTCTGCTCTGACCCAGAGAAGGAAGAGATTGTGTACGAGGACAAGGAGGTCATTTCCGAGGTGAGCTCGGCGGCAGGCTT
AATTGAAAATATGGATGGTTCCAGTCCGGGTTTAGGTTGTCTGATGCCGGAAAACGTTGGAGAAAAGTTACAGCGGCTAGCGGTGGAGGAGAAGGAGGCGATTTGGGGAG
GAGGGATTTCGGTGGAAAGTGTGTGGTACGGCGAGGAGTTGAGCAACAAGGAATTTCAGGAAAGAATAGAAGCGTTCATCGCCAGGGAATTGAGGTTTCGCCGGGAAGAG
TCCGGTGCCGTCGTCCTCCGCCGT
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAGAGGAAATTGGAGCAATGGGAGTGTGTGGTAATCTCCGAATTTTGGTGAAAATTTTCCGATTTACAGAGGTTTTTGTGGGGCTGGCATTTTTTTTCTGGAT
ATTTAATAGCCTCCCTTTGGCCGTCAGAGTTTCGAGCGATTACATTTCTCAAATATCCGGCTTCTTTTCCAGCTCTGTTTTTGGCTTCGTACTCTGCAACACTATTGTCG
TCGCTCTAATTGCCAACCCCGACCGTTTCTCCGGCCAAAAACTCGCCGGTGACAGTGTTGAAACCGAAATATTTAACGAATTGGTCAAAAACGGCACTGGAAGTTCACTG
TCTTTGCCTGGAAATGAGCCAATTGGCCGGCTCTGCTCTGACCCAGAGAAGGAAGAGATTGTGTACGAGGACAAGGAGGTCATTTCCGAGGTGAGCTCGGCGGCAGGCTT
AATTGAAAATATGGATGGTTCCAGTCCGGGTTTAGGTTGTCTGATGCCGGAAAACGTTGGAGAAAAGTTACAGCGGCTAGCGGTGGAGGAGAAGGAGGCGATTTGGGGAG
GAGGGATTTCGGTGGAAAGTGTGTGGTACGGCGAGGAGTTGAGCAACAAGGAATTTCAGGAAAGAATAGAAGCGTTCATCGCCAGGGAATTGAGGTTTCGCCGGGAAGAG
TCCGGTGCCGTCGTCCTCCGCCGT
Protein sequenceShow/hide protein sequence
MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNSLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNELVKNGTGSSL
SLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAGLIENMDGSSPGLGCLMPENVGEKLQRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREE
SGAVVLRR