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MS010581 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010581
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:745534..745941
RNA-Seq ExpressionMS010581
SyntenyMS010581
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603927.1 hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]6.0e-1444.6Show/hide
Query:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV----------------------GGGGGGGGHWSGE---
        MER  GCGV+LV+GIVLS+Y  LVEG   FERS     SNE  ++D         SGRN TV                      GGGGGGGG   GE   
Subjt:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV----------------------GGGGGGGGHWSGE---

Query:  ---RKKDTKHNKKHEK------------------------------------GGGGGGGGGGGGDGKGGGGGG---------GFGGGGSRGFCWIWGCGG
           RKKDTKH+KKH K                                    GGGGGGGGGGGG G GGGGGG         GFGGGGSR FCWIWGCGG
Subjt:  ---RKKDTKHNKKHEK------------------------------------GGGGGGGGGGGGDGKGGGGGG---------GFGGGGSRGFCWIWGCGG

Query:  GGHGKGLTGKGGP
        G   K    K GP
Subjt:  GGHGKGLTGKGGP
XP_022977280.1 putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]6.2e-1149.43Show/hide
Query:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV---------------------GGGGGGGGHWSG-----
        MER   CGV+LV+GIVLS  L LVEG   FERS S   SNE  E+D         SGRN TV                     GGGGGGGG  SG     
Subjt:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV---------------------GGGGGGGGHWSG-----

Query:  ------ERKKD--TKHNKKHEKGGGGGGGGGGGGDGKGGGGGG--GFGGGGSRGFCWIWGCGGGGHGKGLTGKGGP
              E+  D      ++ E GGGGGGGGGGGG G GGG GG  GFGGGGSR FCWIWGCGGG   K    K GP
Subjt:  ------ERKKD--TKHNKKHEKGGGGGGGGGGGGDGKGGGGGG--GFGGGGSRGFCWIWGCGGGGHGKGLTGKGGP
XP_038882243.1 glycine-rich protein DOT1-like [Benincasa hispida]3.5e-0648.05Show/hide
Query:  MERKTGCGVILVLGIVL-SVYLVLVEG--AMSFERSES-AAQSNELFEVDHH-----ASGRNVTVGGG---------GGGGGHWSGERKKDTKHNKKHEK
        M R+ G GV+L++GIVL S+YLV VEG    +FE SE+    SN+    D        +GRNVTV GG         G GGG   G RKKD KHNKKH+ 
Subjt:  MERKTGCGVILVLGIVL-SVYLVLVEG--AMSFERSES-AAQSNELFEVDHH-----ASGRNVTVGGG---------GGGGGHWSGERKKDTKHNKKHEK

Query:  ---------------GGGGGGGGGGGGDGKGGGGGGGFGGGGSRGFCWIWGCGG
                       GGGGGG GGGGG G G GGGGG GGG  RG  W  G GG
Subjt:  ---------------GGGGGGGGGGGGDGKGGGGGGGFGGGGSRGFCWIWGCGG
TrEMBL top hitse value%identityAlignment
A0A0A0KGL8 Uncharacterized protein8.1e-0951.68Show/hide
Query:  MERKTGCGVILVLGIVL-SVYLVLVEGAMSFERSES-AAQSNELFEVDHHASGRNVTV--------------GGGGGGGGHWSGERKKDTKHNKKHEKGG
        M+ + G GV+L LGIVL S+YLV  +   SF+ +ES  + SN   +++    GRN+T+              GGGGGGGG   G RKKDTKHNKKH K G
Subjt:  MERKTGCGVILVLGIVL-SVYLVLVEGAMSFERSES-AAQSNELFEVDHHASGRNVTV--------------GGGGGGGGHWSGERKKDTKHNKKHEKGG

Query:  GGGGGGGGGGDGKGGGGGGGFGGGGSRGFCWIWGCGGGGHGKGLTGKGG
         GGGGGGGGG+G GGGGGG  GGGG        G GGGG+GKG  G GG
Subjt:  GGGGGGGGGGDGKGGGGGGGFGGGGSRGFCWIWGCGGGGHGKGLTGKGG
A0A6J1ILV4 putative glycine-rich cell wall structural protein 13.0e-1149.43Show/hide
Query:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV---------------------GGGGGGGGHWSG-----
        MER   CGV+LV+GIVLS  L LVEG   FERS S   SNE  E+D         SGRN TV                     GGGGGGGG  SG     
Subjt:  MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHH------ASGRNVTV---------------------GGGGGGGGHWSG-----

Query:  ------ERKKD--TKHNKKHEKGGGGGGGGGGGGDGKGGGGGG--GFGGGGSRGFCWIWGCGGGGHGKGLTGKGGP
              E+  D      ++ E GGGGGGGGGGGG G GGG GG  GFGGGGSR FCWIWGCGGG   K    K GP
Subjt:  ------ERKKD--TKHNKKHEKGGGGGGGGGGGGDGKGGGGGG--GFGGGGSRGFCWIWGCGGGGHGKGLTGKGGP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAAAAACGGGTTGTGGGGTTATTTTGGTTTTGGGAATTGTGTTGAGCGTGTACTTGGTTTTGGTTGAGGGGGCCATGAGTTTCGAGAGAAGTGAGAGCGCTGC
TCAATCGAATGAATTGTTTGAGGTGGATCATCATGCAAGTGGAAGAAATGTTACTGTTGGCGGCGGCGGCGGCGGTGGAGGCCATTGGAGTGGGGAAAGAAAGAAAGATA
CAAAACATAATAAAAAACATGAAAAAGGCGGAGGTGGCGGCGGAGGCGGTGGAGGAGGCGGAGACGGCAAGGGCGGCGGTGGCGGAGGCGGTTTTGGCGGAGGAGGAAGT
AGAGGTTTTTGCTGGATTTGGGGATGCGGCGGCGGCGGTCACGGCAAAGGACTAACCGGAAAGGGAGGCCCCTCAAAC
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAAAAACGGGTTGTGGGGTTATTTTGGTTTTGGGAATTGTGTTGAGCGTGTACTTGGTTTTGGTTGAGGGGGCCATGAGTTTCGAGAGAAGTGAGAGCGCTGC
TCAATCGAATGAATTGTTTGAGGTGGATCATCATGCAAGTGGAAGAAATGTTACTGTTGGCGGCGGCGGCGGCGGTGGAGGCCATTGGAGTGGGGAAAGAAAGAAAGATA
CAAAACATAATAAAAAACATGAAAAAGGCGGAGGTGGCGGCGGAGGCGGTGGAGGAGGCGGAGACGGCAAGGGCGGCGGTGGCGGAGGCGGTTTTGGCGGAGGAGGAAGT
AGAGGTTTTTGCTGGATTTGGGGATGCGGCGGCGGCGGTCACGGCAAAGGACTAACCGGAAAGGGAGGCCCCTCAAAC
Protein sequenceShow/hide protein sequence
MERKTGCGVILVLGIVLSVYLVLVEGAMSFERSESAAQSNELFEVDHHASGRNVTVGGGGGGGGHWSGERKKDTKHNKKHEKGGGGGGGGGGGGDGKGGGGGGGFGGGGS
RGFCWIWGCGGGGHGKGLTGKGGPSN