; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010585 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010585
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhistone H1
Genome locationscaffold35:814596..815278
RNA-Seq ExpressionMS010585
SyntenyMS010585
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034103.1 hypothetical protein SDJN02_03830 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-6576.47Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VPV D P  E P+AE+  EAEKPV+E+K RT REKKPRQ K ASHPPYFQMIKEAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTA+GKL K+KASY+LSEAGKKDK ASKV KA AEKK + AR+TR     +K+EAA+    A KKVVAKKPK++TPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK

Query:  KSAA
        K+ A
Subjt:  KSAA

XP_022132486.1 histone H1 [Momordica charantia]3.7e-8999.5Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
        ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEE AAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA

XP_022979052.1 histone H1 [Cucurbita maxima]1.2e-6677.45Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VP  D P AE P+AE+P EAEKPV+E+K RTPREKKPRQ K ASHPPYFQMIKEAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTA+GKL KIKASY+LSEAGKKDK ASKV KA AEK  + AR+TR     +K+EAA+    A KKVVAKKPK++TPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK

Query:  KSAA
        K+ A
Subjt:  KSAA

XP_023544256.1 histone H1 [Cucurbita pepo subsp. pepo]4.4e-6676.96Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VP  D P AE P+AE+P E+EKPV+E+K RTPR KKPRQ K ASHPPYFQMIKEAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTA+GKL KIKASY+LSEAGKKDK ASKV KA AEKK + AR+TR     +K+EAA+    A KKVVAKKPK++TPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK

Query:  KSAA
        K+ A
Subjt:  KSAA

XP_038883821.1 histone H1 [Benincasa hispida]3.4e-6678.1Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEK-PVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSS GE +V+VP  DVPP   PAAE+P EAEK PVKE+KPR PREKKPRQ K ASHPPYFQMI EAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEK-PVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSP
        L+LQLKNSTA+GKL KIKASYKLSE G KKDKNA+KV KA AEKK + AR+TRT    R+A KK+EAA+    A KKVVAKKPK+STPAKPK PKSIRSP
Subjt:  LALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSP

Query:  AAKRAKKSAA
        AAKRAKK+ A
Subjt:  AAKRAKKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H11.5e-6478.05Show/hide
Query:  MSSTGE-GDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE  +V+VP  DV P E PA E+P E EKPVKE+KPR  REKKPRQ K ASHPPYFQMI EAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGE-GDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA-AAKKVVAKKPKKSTPAKPKQPKSIRSPAAK
        LALQLKNSTA+GKL KIKASYKLSE G KKD NA+KV KA AEKK + AR+TRT    R+A K EEA + A KKVVAKKPK+STPAKPKQPKSI+SPAAK
Subjt:  LALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA-AAKKVVAKKPKKSTPAKPKQPKSIRSPAAK

Query:  RAKKS
        RAKK+
Subjt:  RAKKS

A0A5A7SK97 Histone H14.5e-6478.16Show/hide
Query:  MSSTGE-GDVEVPVADVPPAE-APAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        M+STGE  +V+VP  DV P E  PA E+P E EKPVKE+KPR PREKKPRQ K ASHPPYFQMI EAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-GDVEVPVADVPPAE-APAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA-AAKKVVAKKPKKSTPAKPKQPKSIRSPAA
        ILALQLKNSTA+GKL KIKASYKLSE G KKDKNA+KV KA AEK  + AR+TRT    R+A KKEEA + A KKVVAKKPK+STPAKPKQPKSI+SPAA
Subjt:  ILALQLKNSTARGKLAKIKASYKLSEAG-KKDKNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAA-AAKKVVAKKPKKSTPAKPKQPKSIRSPAA

Query:  KRAKKS
        KRAKK+
Subjt:  KRAKKS

A0A6J1BSE6 histone H11.8e-8999.5Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
        ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEE AAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA

A0A6J1GFQ2 histone H11.4e-6576.47Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VP  D P  E P+AE+  EAEKPV+E+K RTPREKKPRQ K ASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTA+GKL KIKASY+LSEAGKKDK ASKV KA AEKK + AR+TR     +K+EAA+    A KKVVAKKPK++TPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK

Query:  KSAA
        K+ A
Subjt:  KSAA

A0A6J1IMR2 histone H15.6e-6777.45Show/hide
Query:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL
        MSSTGE +V+VP  D P AE P+AE+P EAEKPV+E+K RTPREKKPRQ K ASHPPYFQMIKEAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKIL
Subjt:  MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKIL

Query:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK
        ALQLKNSTA+GKL KIKASY+LSEAGKKDK ASKV KA AEK  + AR+TR     +K+EAA+    A KKVVAKKPK++TPAKPKQPKSIRSPAAKRAK
Subjt:  ALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAA----AAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAK

Query:  KSAA
        K+ A
Subjt:  KSAA

SwissProt top hitse value%identityAlignment
P08283 Histone H14.2e-1948.48Show/hide
Query:  EAPAAEKP-AEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKA
        E P  E+P AE EK  K +  +  +  KPR P  ASHP Y +MIK+AI SL EKNGSS YAIAK++EEK K  LPANF+K+L   LK + A GKL K+K 
Subjt:  EAPAAEKP-AEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKA

Query:  SYKLSEAGKKDKNA---------SKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK------KSTPAKPK---QPKSIRSPAAKRAKKS
        S+KLS A KK   A         +K VKAK   KP+ A++    + A K +A AA  K  A KPK      K T AKPK   +PKS   P AK AK S
Subjt:  SYKLSEAGKKDKNA---------SKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK------KSTPAKPK---QPKSIRSPAAKRAKKS

P23444 Histone H11.6e-1846.15Show/hide
Query:  VPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAR
        V  A   PA+APAA  PA      K +K   P+++      + +H PY +M+ EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L +QLK   A 
Subjt:  VPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAR

Query:  GKLAKIKASYKLSEAGK---KDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAA---AAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSA
        GKL K+K SYKLS A K   K K A K  K  A KKP+ A   + +  AK + A     AAK     KPK  TPAKPK       PAAK   K+A
Subjt:  GKLAKIKASYKLSEAGK---KDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAA---AAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSA

P27806 Histone H15.9e-2144.55Show/hide
Query:  STGEGDVEVPVADVPPA-----EAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        ST     ++PV  V  A     + PAA KPA+A K  K +K  TP  KKPR   A  HP Y +M+ EAI++L E++GSS  AI K++E+KHKA LPANFR
Subjt:  STGEGDVEVPVADVPPA-----EAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPK---------QPKSIR
        KIL  Q+K   A GKL K+K SYKL++       A   VK K   K +PA   + +  AKK  A + AKK  A KPK   PAK K         +PK+  
Subjt:  KILALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPK---------QPKSIR

Query:  SPAAKRAKKSA
         P AK A K A
Subjt:  SPAAKRAKKSA

P40267 Histone H15.8e-4559.8Show/hide
Query:  TGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ
        T  G+VE P     P EA   ++ A    P  ++KPR P+EKKP+  KA +HPPYFQMIKEA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKIL LQ
Subjt:  TGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ

Query:  LKNSTARGKLAKIKASYKLSEAGKKD----KNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRA
        LKNS A+GKL KIKASYKLSEAGKK+     +  K+ KA ++KKPR  R+T T        KK +A    KKV AK+ +KSTPAK KQPKSI+SPAAKRA
Subjt:  LKNSTARGKLAKIKASYKLSEAGKKD----KNASKVVKAKAEKKPRPARSTRT----RRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRA

Query:  KKSA
        KK A
Subjt:  KKSA

Q08864 Histone H1-I1.1e-1639.04Show/hide
Query:  PVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKH-KAVLPANFRKILALQLKNSTAR
        P A+ P A+AP A+ P + + P   ++P+ P+EKKP+   A +HPPY +M+K+AI++L E+NGSS  A+ K++E K+ K +   NF K L+  +K     
Subjt:  PVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKH-KAVLPANFRKILALQLKNSTAR

Query:  GKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKK
        GKL K+K S+KLSEA K     S   KAKA+ + +P      +++  K + A A KK  A K K   P K K+ K  +  A  +A+K
Subjt:  GKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKK

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein5.9e-1640.2Show/hide
Query:  SSTGEGDVEVPVADVPPAEAPAAEKPA---EAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        ++T EG+     AD P  +A   +KPA      K VKE K +      P++   +SHP Y +MIK+AI +L E+ GSS YAI K++EEK K  LP  FRK
Subjt:  SSTGEGDVEVPVADVPPAEAPAAEKPA---EAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK----KSTPAKPKQPKSIRSPAAKR
        +L L LK   A GKL K+KAS+KL  A  K  +     +  A  K +PA +    +A +K  AA+ AKK +A KPK    K   AK K     R+ AA  
Subjt:  ILALQLKNSTARGKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK----KSTPAKPKQPKSIRSPAAKR

Query:  AKKS
         +K+
Subjt:  AKKS

AT2G18050.1 histone H1-31.1e-2750.6Show/hide
Query:  RTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKASYKLSEAGK-----KDKNASK
        +TP  KKPR+PK  +HPPYFQMIKEA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS A+GKL KI+ASYKLS+  K     +DK   K
Subjt:  RTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKASYKLSEAGK-----KDKNASK

Query:  VVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVA--KKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
         +K + ++  +  RS+ TR            KK V+  K+ KK    K +QPKSI+S   K+    A+
Subjt:  VVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVA--KKPKKSTPAKPKQPKSIRSPAAKRAKKSAA

AT2G18050.2 histone H1-35.7e-1948.3Show/hide
Query:  MIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKASYKLSEAGK-----KDKNASKVVKAKAEKKPRPARSTRTRRA
        MIKEA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS A+GKL KI+ASYKLS+  K     +DK   K +K + ++  +  RS+ TR  
Subjt:  MIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKIKASYKLSEAGK-----KDKNASKVVKAKAEKKPRPARSTRTRRA

Query:  AKKEEAAAAAKKVVA--KKPKKSTPAKPKQPKSIRSPAAKRAKKSAA
                  KK V+  K+ KK    K +QPKSI+S   K+    A+
Subjt:  AKKEEAAAAAKKVVA--KKPKKSTPAKPKQPKSIRSPAAKRAKKSAA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein1.1e-1138.22Show/hide
Query:  PPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKI
        P A+   ++K   A+   K  K   P +KK      +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L + LK   A  KL K+
Subjt:  PPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKI

Query:  KASYKLSEAG-----------KKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK-KSTPAKPKQPKSIRSPAAKRA
        KAS+K+  A            KK        K K      PA++    +  KK  A   AK  V  KPK K T AKPK  KS+ + +  +A
Subjt:  KASYKLSEAG-----------KKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPK-KSTPAKPKQPKSIRSPAAKRA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein1.1e-1137.91Show/hide
Query:  PPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKI
        P A+   ++K   A+   K  K   P +KK      +SHP Y +MIK+AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L + LK   A  KL K+
Subjt:  PPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTARGKLAKI

Query:  KASYKLSEA-GKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKK
        KAS+K+  A        +  VK KA    +P  S  + R +  ++ AA AKKV   K   +   K K P   +  + ++AKK
Subjt:  KASYKLSEA-GKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGACCGGAGAAGGAGACGTGGAAGTTCCGGTGGCGGATGTGCCTCCGGCGGAGGCTCCGGCTGCAGAGAAGCCGGCGGAGGCGGAGAAGCCGGTTAAGGAGAG
GAAGCCTAGGACTCCGAGGGAGAAGAAGCCTAGGCAGCCGAAAGCCGCTTCACATCCGCCGTATTTTCAGATGATCAAGGAAGCAATCTCGTCTCTCAACGAGAAGAATG
GCTCGAGTCCGTACGCCATAGCCAAATACATGGAGGAAAAACACAAGGCGGTTCTCCCGGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCTACTGCCAGA
GGAAAATTAGCGAAGATCAAGGCCTCGTATAAGCTATCCGAAGCAGGGAAGAAAGACAAGAACGCATCAAAGGTCGTGAAAGCGAAGGCAGAGAAGAAACCTAGACCAGC
AAGAAGCACGAGAACGAGGAGGGCGGCCAAGAAGGAGGAGGCGGCGGCGGCGGCGAAGAAGGTGGTTGCGAAGAAACCGAAGAAATCTACTCCGGCGAAGCCTAAACAGC
CAAAATCGATAAGGTCCCCTGCCGCAAAGAGGGCCAAGAAATCCGCGGCA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGACCGGAGAAGGAGACGTGGAAGTTCCGGTGGCGGATGTGCCTCCGGCGGAGGCTCCGGCTGCAGAGAAGCCGGCGGAGGCGGAGAAGCCGGTTAAGGAGAG
GAAGCCTAGGACTCCGAGGGAGAAGAAGCCTAGGCAGCCGAAAGCCGCTTCACATCCGCCGTATTTTCAGATGATCAAGGAAGCAATCTCGTCTCTCAACGAGAAGAATG
GCTCGAGTCCGTACGCCATAGCCAAATACATGGAGGAAAAACACAAGGCGGTTCTCCCGGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCTACTGCCAGA
GGAAAATTAGCGAAGATCAAGGCCTCGTATAAGCTATCCGAAGCAGGGAAGAAAGACAAGAACGCATCAAAGGTCGTGAAAGCGAAGGCAGAGAAGAAACCTAGACCAGC
AAGAAGCACGAGAACGAGGAGGGCGGCCAAGAAGGAGGAGGCGGCGGCGGCGGCGAAGAAGGTGGTTGCGAAGAAACCGAAGAAATCTACTCCGGCGAAGCCTAAACAGC
CAAAATCGATAAGGTCCCCTGCCGCAAAGAGGGCCAAGAAATCCGCGGCA
Protein sequenceShow/hide protein sequence
MSSTGEGDVEVPVADVPPAEAPAAEKPAEAEKPVKERKPRTPREKKPRQPKAASHPPYFQMIKEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAR
GKLAKIKASYKLSEAGKKDKNASKVVKAKAEKKPRPARSTRTRRAAKKEEAAAAAKKVVAKKPKKSTPAKPKQPKSIRSPAAKRAKKSAA