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MS010589 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010589
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta
Genome locationscaffold35:834329..834454
RNA-Seq ExpressionMS010589
SyntenyMS010589
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHO26288.1 DNA-directed RNA polymerase subunit beta [Arachis hypogaea]3.5e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++LW+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

QRI61085.1 RNA polymerase beta subunit [Kotschya aeschynomenoides]3.5e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++ W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

RYR71192.1 hypothetical protein Ahy_A02g005489 [Arachis hypogaea]3.5e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++LW+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

YP_009141536.1 RNA polymerase beta subunit [Lens culinaris]3.5e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++ W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

YP_009771247.1 RNA polymerase beta subunit [Smithia erubescens]3.5e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++ W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

TrEMBL top hitse value%identityAlignment
A0A023INF2 DNA-directed RNA polymerase subunit beta1.7e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++ W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

A0A2P1GCU2 DNA-directed RNA polymerase subunit beta2.2e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

A0A445E6V2 DNA-directed RNA polymerase1.7e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++LW+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

A0A6F8FQS3 DNA-directed RNA polymerase subunit beta2.2e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

A0A6H0EKB4 DNA-directed RNA polymerase subunit beta1.7e-0559.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT++ W+FE EY GK+IIF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

SwissProt top hitse value%identityAlignment
A0A327 DNA-directed RNA polymerase subunit beta3.0e-0757.14Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

Q06RD9 DNA-directed RNA polymerase subunit beta7.8e-0861.9Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQTT+ W+FE EY GK+ IF G+    FEQPI IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

Q3C1G7 DNA-directed RNA polymerase subunit beta5.0e-0757.14Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

Q4VZP1 DNA-directed RNA polymerase subunit beta2.3e-0759.52Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT S W+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

Q8S8X9 DNA-directed RNA polymerase subunit beta5.0e-0757.14Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK

Arabidopsis top hitse value%identityAlignment
ATCG00190.1 RNA polymerase subunit beta4.7e-0857.14Show/hide
Query:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK
        +KQT + W+FE EY GK+ IF G+    FEQP+ IGKPY LK
Subjt:  NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAACAAACCACGAGTTTATGGTTATTTGAACTTGAGTATTTGGGGAAAAACATAATATTCAGGGGGAAGGATGAGAAATATTTTGAACAACCCATTACTATAGGAAA
ACCTTATGCCTTGAAA
mRNA sequenceShow/hide mRNA sequence
AACAAACAAACCACGAGTTTATGGTTATTTGAACTTGAGTATTTGGGGAAAAACATAATATTCAGGGGGAAGGATGAGAAATATTTTGAACAACCCATTACTATAGGAAA
ACCTTATGCCTTGAAA
Protein sequenceShow/hide protein sequence
NKQTTSLWLFELEYLGKNIIFRGKDEKYFEQPITIGKPYALK