; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010590 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010590
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR50
Genome locationscaffold35:835097..835471
RNA-Seq ExpressionMS010590
SyntenyMS010590
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647605.1 hypothetical protein Csa_003512 [Cucumis sativus]2.0e-4890.48Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL
        MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL

Query:  TAMIK
        T+MIK
Subjt:  TAMIK

XP_008440807.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]2.0e-4890.48Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL
        MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL

Query:  TAMIK
        T+MIK
Subjt:  TAMIK

XP_022132983.1 auxin-responsive protein SAUR50 [Momordica charantia]9.2e-54100Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMIK
        AMIK
Subjt:  AMIK

XP_023003936.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.4e-4876.34Show/hide
Query:  HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNED-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLL
        + + PSLPPA  T +      L  T IMAIK+ANLL PS SFRHI++RCSSFG RNG NED  LPDDVPKGHFAVYVGENRSRYIVPISWL HPQFQSLL
Subjt:  HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNED-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLL

Query:  QIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI
        Q AEEEFGF+HD+G+TIPCEEVVFRSLTAMI
Subjt:  QIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI

XP_038883315.1 auxin-responsive protein SAUR50 [Benincasa hispida]1.2e-4891.43Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL
        MAIK+ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHF VYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGFSHDMG+TIPCEEVVFRSL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL

Query:  TAMIK
        TAMIK
Subjt:  TAMIK

TrEMBL top hitse value%identityAlignment
A0A1S3B1Z6 auxin-induced protein 15A9.7e-4990.48Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL
        MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL

Query:  TAMIK
        T+MIK
Subjt:  TAMIK

A0A5D3CM97 Auxin-induced protein 15A9.7e-4990.48Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL
        MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSL

Query:  TAMIK
        T+MIK
Subjt:  TAMIK

A0A6J1BXR8 auxin-responsive protein SAUR504.5e-54100Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMIK
        AMIK
Subjt:  AMIK

A0A6J1IS43 auxin-responsive protein SAUR50-like2.8e-4888.46Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        MAIK+ NLLQPSAS RHI+KRCSSFGKRNGCN+D LPDDVPKGHFAVYVGENRSR+IVPISWL HPQFQSLL  AEEEFGF+HDMG+TIPCEEVVFRSLT
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMIK
        AMIK
Subjt:  AMIK

A0A6J1KQN6 auxin-responsive protein SAUR50-like1.6e-4876.34Show/hide
Query:  HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNED-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLL
        + + PSLPPA  T +      L  T IMAIK+ANLL PS SFRHI++RCSSFG RNG NED  LPDDVPKGHFAVYVGENRSRYIVPISWL HPQFQSLL
Subjt:  HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNED-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLL

Query:  QIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI
        Q AEEEFGF+HD+G+TIPCEEVVFRSLTAMI
Subjt:  QIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR509.0e-3668.27Show/hide
Query:  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        +K+ + L  +A  + I+KRCSS GK+N  G +ED LP DVPKGHF VYVGENRSRYIVPIS+L HP+FQSLLQ AEEEFGF HDMGLTIPC+E+VF++LT
Subjt:  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

P0DKL1 Auxin-responsive protein SAUR503.7e-2959.41Show/hide
Query:  IKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAM
        I++++    + + + IIK+CSSFGK N  ++  LP+DVPKGHF VYVGE R+RYIVPIS L HP FQ LLQ +EEEFGF+HDMG+ IPC+EV F S  +M
Subjt:  IKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAM

Query:  I
        I
Subjt:  I

P33081 Auxin-induced protein 15A2.7e-1652Show/hide
Query:  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSLTAMI
        G  + S   D PKG+ AVYVGE   R+++P+S+L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ +
Subjt:  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSLTAMI

P33082 Auxin-induced protein X157.9e-1650.67Show/hide
Query:  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSLTAMI
        G  + S   D PKG+ AVYVGE   R+++P+S++  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T  +
Subjt:  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSLTAMI

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 105.0e-3465.18Show/hide
Query:  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE
        MAIKR++    S  AS + I+KRCSS  K    NGC    ED LP DVPKGHF VYVG NRSRYIVPISWL H +FQ+LL++AEEEFGF HDMGLTIPC+
Subjt:  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE

Query:  EVVFRSLTAMIK
        EV FRSL +M +
Subjt:  EVVFRSLTAMIK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family4.6e-3564.81Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRN----GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVF
        MA+K+AN L  +A  + I+KRCSS GK+     G +E+  P +VPKGHF VYVGENR RY+VPIS+L  P+FQ LLQ AEEEFGF HDMGLTIPCEEVVF
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRN----GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVF

Query:  RSLTAMIK
        RSLT+M++
Subjt:  RSLTAMIK

AT2G18010.1 SAUR-like auxin-responsive protein family3.5e-3565.18Show/hide
Query:  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE
        MAIKR++    S  AS + I+KRCSS  K    NGC    ED LP DVPKGHF VYVG NRSRYIVPISWL H +FQ+LL++AEEEFGF HDMGLTIPC+
Subjt:  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE

Query:  EVVFRSLTAMIK
        EV FRSL +M +
Subjt:  EVVFRSLTAMIK

AT2G21220.1 SAUR-like auxin-responsive protein family7.6e-3870.87Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        MA+KR++ L  +A  + I+KRCSS  K    +ED LP DVPKGHF VYVGE RSRYIVPIS+L HP+F+SLLQ AEEEFGF+HDMGLTIPCEEVVFRSLT
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMI
        +MI
Subjt:  AMI

AT4G34760.1 SAUR-like auxin-responsive protein family6.4e-3768.27Show/hide
Query:  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT
        +K+ + L  +A  + I+KRCSS GK+N  G +ED LP DVPKGHF VYVGENRSRYIVPIS+L HP+FQSLLQ AEEEFGF HDMGLTIPC+E+VF++LT
Subjt:  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

AT4G38860.1 SAUR-like auxin-responsive protein family1.0e-3466.67Show/hide
Query:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSL
        MA+KR++ L  +A  + I+KRCSS GK+   +E+ LP DVPKGHF VYVGE R+RYIVPIS+L HP+F  LLQ AEEEFGF HDM GLTIPCEEVVF SL
Subjt:  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSL

Query:  TAMIK
        T+MI+
Subjt:  TAMIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAG
ACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACC
GAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATC
CCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG
mRNA sequenceShow/hide mRNA sequence
CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAG
ACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACC
GAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATC
CCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG
Protein sequenceShow/hide protein sequence
HQLSPSLPPAKNTQHLPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTI
PCEEVVFRSLTAMIK