CuGenDBv2

Gene ID	MS010593
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold35:847317..847859
RNA-Seq Expression	MS010593
Synteny	MS010593
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603917.1 hypothetical protein SDJN03_04526, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-75

82.32

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME T+LH+ LASKPPLLT++PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP  +TPPETV+VRFRKRSRRRSKQESEDGAA GN R 
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022133044.1 uncharacterized protein LOC111005736 [Momordica charantia]

3.8e-93

98.34

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        METTTLHQLLASKPPLLT+NPH+FSRISQNQVSFLSLRRKQALKINPINAA PDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]

3.6e-75

82.32

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME T+LH+ LASKPPLLT++PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP A+TPPETV+VRFRKRSRRRSKQESEDGAA GN   
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]

4.7e-75

81.77

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME+T+LH+ LAS+PPLLT+ PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP  +TPPETV+VRFRKRSRRRSKQESEDGAA GN R 
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]

5.6e-76

82.87

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME T+LH+ LASKPPLLT++PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP A+TPPETV+VRFRKRSRRRSKQESEDGAA GN R 
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B215 uncharacterized protein LOC103485119

6.2e-73

78.45

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME+ +LHQ+LASKPPL T+NP KFSR SQ Q+ F SLR+++ L+I PINA   D GD+ PPQVP  +TPPETVEVRFRKRSRRRSK+E EDGAA GNGRP
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA VE++S KAKKWE+MSV EKA ELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A5A7SKL6 Putative transmembrane protein

6.2e-73

78.45

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME+ +LHQ+LASKPPL T+NP KFSR SQ Q+ F SLR+++ L+I PINA   D GD+ PPQVP  +TPPETVEVRFRKRSRRRSK+E EDGAA GNGRP
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKA VE++S KAKKWE+MSV EKA ELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1BUU3 uncharacterized protein LOC111005736

1.9e-93

98.34

Show/hide

Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        METTTLHQLLASKPPLLT+NPH+FSRISQNQVSFLSLRRKQALKINPINAA PDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1GFF1 uncharacterized protein LOC111453672

1.8e-75

82.32

Show/hide

Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME T+LH+ LASKPPLLT++PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP A+TPPETV+VRFRKRSRRRSKQESEDGAA GN   
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

A0A6J1IVM3 uncharacterized protein LOC111478809

2.3e-75

81.77

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Query:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP
        ME+T+LH+ LAS+PPLLT+ PHKFS  SQNQV FLSLR +Q L+I PINA   D GDS PPQVP  +TPPETV+VRFRKRSRRRSKQESEDGAA GN R 
Subjt:  METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRP

Query:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        RKAPVEIAS+K KKWE+M +AEKATELYMGEKGLLFWLNKFAYASIF+MIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
Subjt:  RKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G17972.1 unknown protein

1.3e-30

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Query:  KQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRPRKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLN
        ++ L IN +N+    GGD       +   P + VE+RF++ SRR+ +   E+G+  G G+  K    +     K WE+M++ EKA ELY+GEKGLLFWLN
Subjt:  KQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRPRKAPVEIASEKAKKWEDMSVAEKATELYMGEKGLLFWLN

Query:  KFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG
        K AYASI+++IGGWI FRFVGP+ NLYQLDTPPL P +I KG
Subjt:  KFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAACCACCACTCTCCACCAGCTTCTGGCTTCTAAACCCCCGCTCTTAACCGTTAATCCACATAAATTCTCACGTATATCTCAGAATCAGGTCTCCTTTCTCTCCCT
ACGCCGTAAGCAGGCTCTCAAAATCAATCCGATCAATGCCGCCAGCCCCGACGGCGGCGACAGTACGCCTCCGCAGGTTCCGCAGGCAGTAACGCCTCCGGAGACGGTGG
AAGTTCGGTTCCGGAAGAGGTCGAGAAGACGATCGAAACAGGAGAGCGAGGATGGAGCGGCGACGGGGAATGGGCGGCCGAGGAAGGCGCCGGTGGAGATCGCTTCCGAG
AAGGCGAAGAAGTGGGAGGATATGAGCGTGGCGGAGAAGGCGACGGAGTTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTCAACAAATTTGCTTATGCTTCAATTTT
TGTGATGATTGGTGGTTGGATAGTGTTTCGTTTTGTTGGGCCGTCGCTTAACCTCTACCAATTGGATACTCCGCCATTATCGCCGACTTCCATTTTCAAGGGT

mRNA sequence

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Protein sequence

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METTTLHQLLASKPPLLTVNPHKFSRISQNQVSFLSLRRKQALKINPINAASPDGGDSTPPQVPQAVTPPETVEVRFRKRSRRRSKQESEDGAATGNGRPRKAPVEIASE
KAKKWEDMSVAEKATELYMGEKGLLFWLNKFAYASIFVMIGGWIVFRFVGPSLNLYQLDTPPLSPTSIFKG

MS010593 (gene) of Bitter gourd (TR) v1 genome