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MS010597 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010597
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationscaffold35:869193..869582
RNA-Seq ExpressionMS010597
SyntenyMS010597
Gene Ontology termsGO:0009626 - plant-type hypersensitive response (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025678.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]4.7e-2465.45Show/hide
Query:  EKGRRIPRKMK-ANNPCIPKLRGDATK--NKPPSPMGLLERLREALFRFIMLCALSKASNN---GSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEF
        EK RR+PRK+K   N C+ K R D  K  NKPPS M L ERLREA+FRFIMLCALSKA+N+      AF DD V RRR +SY N  DHHHSEAVADCIEF
Subjt:  EKGRRIPRKMK-ANNPCIPKLRGDATK--NKPPSPMGLLERLREALFRFIMLCALSKASNN---GSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEF

Query:  IKKNAYSDDY
        IK  AYSDD+
Subjt:  IKKNAYSDDY

KAG6603914.1 hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2261.79Show/hide
Query:  EKGRRIPRKMKANNPCIPKLRGDATKN-KPPSPMGLLERLREALFRFIMLCALSKASNNGS--PAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIKK
        EK RR+P K         KLRGD  KN K P  M L ERLREA+FRFIMLCALSKA+N+ S    F DD V  RR+ SY N  DHHHSEAVADCIEFIKK
Subjt:  EKGRRIPRKMKANNPCIPKLRGDATKN-KPPSPMGLLERLREALFRFIMLCALSKASNNGS--PAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIKK

Query:  NAYSDDYAASDNGRSMDAGTDMA
         AYSDD    D G S+DA  DMA
Subjt:  NAYSDDYAASDNGRSMDAGTDMA

KAG6645580.1 hypothetical protein CIPAW_08G131800, partial [Carya illinoinensis]7.2e-1755.56Show/hide
Query:  MEKGRRIPRKMKANNPCIPKLRGDAT----KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFI
        MEK    PRK K ++ CIP+LRG+A      NK  SPM LLER REA+ R IML ALSKA++NG+ +  D   A+ R+  Y N  D HHSEAVADCIEFI
Subjt:  MEKGRRIPRKMKANNPCIPKLRGDAT----KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFI

Query:  KKNAYSDD
        KK A +D+
Subjt:  KKNAYSDD

KGN49339.2 hypothetical protein Csa_003207 [Cucumis sativus]1.1e-2564Show/hide
Query:  EKGRRIPRKMK-ANNPCIPKLR-GDATK-NKPPSPMGLLERLREALFRFIMLCALSKASNNGSPA---FPDDAVARRRQYSYSNAADHHHSEAVADCIEF
        EK RR+PRK+K   N C+ K R GDA K  KPPSPM L ERLREA+FRFIMLCALSKA+N+   A   F DD V RRR +SY N  DHHHSEAVADCIEF
Subjt:  EKGRRIPRKMK-ANNPCIPKLR-GDATK-NKPPSPMGLLERLREALFRFIMLCALSKASNNGSPA---FPDDAVARRRQYSYSNAADHHHSEAVADCIEF

Query:  IKKNAYSDDYAASDNGRSMDAGTDM
        IK  AYSDD    D G   DA  DM
Subjt:  IKKNAYSDDYAASDNGRSMDAGTDM

TKS00259.1 hypothetical protein D5086_0000184720 [Populus alba]9.4e-1750.39Show/hide
Query:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK
        MEKG   P++MK ++ CIP+LR +AT   KN   SPM LLER R+A+FR +ML ALSKA++N + + PD  V ++R   Y   AD HHSEAVADCIEFIK
Subjt:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK

Query:  KNAYSDDYAA---SDNGRSMDAGTDMA
        K++ +D       S    S DA  +MA
Subjt:  KNAYSDDYAA---SDNGRSMDAGTDMA

TrEMBL top hitse value%identityAlignment
A0A0A0KGN3 Uncharacterized protein5.4e-2664Show/hide
Query:  EKGRRIPRKMK-ANNPCIPKLR-GDATK-NKPPSPMGLLERLREALFRFIMLCALSKASNNGSPA---FPDDAVARRRQYSYSNAADHHHSEAVADCIEF
        EK RR+PRK+K   N C+ K R GDA K  KPPSPM L ERLREA+FRFIMLCALSKA+N+   A   F DD V RRR +SY N  DHHHSEAVADCIEF
Subjt:  EKGRRIPRKMK-ANNPCIPKLR-GDATK-NKPPSPMGLLERLREALFRFIMLCALSKASNNGSPA---FPDDAVARRRQYSYSNAADHHHSEAVADCIEF

Query:  IKKNAYSDDYAASDNGRSMDAGTDM
        IK  AYSDD    D G   DA  DM
Subjt:  IKKNAYSDDYAASDNGRSMDAGTDM

A0A4U5PT50 Uncharacterized protein4.5e-1750.39Show/hide
Query:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK
        MEKG   P++MK ++ CIP+LR +AT   KN   SPM LLER R+A+FR +ML ALSKA++N + + PD  V ++R   Y   AD HHSEAVADCIEFIK
Subjt:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK

Query:  KNAYSDDYAA---SDNGRSMDAGTDMA
        K++ +D       S    S DA  +MA
Subjt:  KNAYSDDYAA---SDNGRSMDAGTDMA

A0A5A7SHP0 Transducin/WD40 repeat-like superfamily protein2.3e-2465.45Show/hide
Query:  EKGRRIPRKMK-ANNPCIPKLRGDATK--NKPPSPMGLLERLREALFRFIMLCALSKASNN---GSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEF
        EK RR+PRK+K   N C+ K R D  K  NKPPS M L ERLREA+FRFIMLCALSKA+N+      AF DD V RRR +SY N  DHHHSEAVADCIEF
Subjt:  EKGRRIPRKMK-ANNPCIPKLRGDATK--NKPPSPMGLLERLREALFRFIMLCALSKASNN---GSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEF

Query:  IKKNAYSDDY
        IK  AYSDD+
Subjt:  IKKNAYSDDY

A0A5C7HUV3 Uncharacterized protein2.9e-1651.61Show/hide
Query:  MEKGRRIPRKMKANNPCIPKL----RGDATKNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFI
        MEK R  PRKMK  N CIP+L         KNK  +P+ LLER REA+FR IML ALSKA+N+          + R   SY + AD HHSEAVADCIEFI
Subjt:  MEKGRRIPRKMKANNPCIPKL----RGDATKNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFI

Query:  KKNAYSDDYAASDNGRSMDAGTDM
        KK A +DD   ++NGR   A T +
Subjt:  KKNAYSDDYAASDNGRSMDAGTDM

B9MXG5 Uncharacterized protein1.3e-1653.77Show/hide
Query:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK
        MEKG   P++MK ++ CIP+LR + T   KN   SPM LLER R+A+FR +ML ALSKA++N + + PD  V ++R   Y   AD HHSEAVADCIEFIK
Subjt:  MEKGRRIPRKMKANNPCIPKLRGDAT---KNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIK

Query:  KNAYSD
        K++ +D
Subjt:  KNAYSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAATGGAAAAAGGCCGAAGAATCCCGAGAAAGATGAAGGCCAATAATCCCTGCATCCCAAAGCTCAGAGGCGACGCCACGAAGAACAAGCCCCCTTCGCCGATGGGCCT
GCTCGAGCGCCTCCGGGAGGCCCTGTTCCGCTTCATCATGCTCTGTGCTCTCTCCAAGGCCTCAAATAATGGTAGTCCCGCCTTCCCAGACGACGCCGTTGCGCGGCGGC
GGCAGTACTCGTACTCGAATGCCGCCGACCACCACCACAGCGAGGCCGTCGCCGACTGCATCGAGTTCATCAAGAAGAACGCGTATTCCGACGACTACGCCGCGAGCGAC
AACGGTAGATCGATGGATGCCGGCACCGACATGGCCGGTTGGGTAAAAATTTCGAGTAAT
mRNA sequenceShow/hide mRNA sequence
CCAATGGAAAAAGGCCGAAGAATCCCGAGAAAGATGAAGGCCAATAATCCCTGCATCCCAAAGCTCAGAGGCGACGCCACGAAGAACAAGCCCCCTTCGCCGATGGGCCT
GCTCGAGCGCCTCCGGGAGGCCCTGTTCCGCTTCATCATGCTCTGTGCTCTCTCCAAGGCCTCAAATAATGGTAGTCCCGCCTTCCCAGACGACGCCGTTGCGCGGCGGC
GGCAGTACTCGTACTCGAATGCCGCCGACCACCACCACAGCGAGGCCGTCGCCGACTGCATCGAGTTCATCAAGAAGAACGCGTATTCCGACGACTACGCCGCGAGCGAC
AACGGTAGATCGATGGATGCCGGCACCGACATGGCCGGTTGGGTAAAAATTTCGAGTAAT
Protein sequenceShow/hide protein sequence
PMEKGRRIPRKMKANNPCIPKLRGDATKNKPPSPMGLLERLREALFRFIMLCALSKASNNGSPAFPDDAVARRRQYSYSNAADHHHSEAVADCIEFIKKNAYSDDYAASD
NGRSMDAGTDMAGWVKISSN