; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010667 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010667
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold35:1284084..1284662
RNA-Seq ExpressionMS010667
SyntenyMS010667
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025611.1 zinc finger protein ZAT4 [Cucumis melo var. makuwa]1.0e-5160.85Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP
        ME+DH+    S   + G GSD    +TP K  T   E DV VSS              SPQE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST P
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN
        KCATCGK FGSWKAVFGHLRSHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDLNDPE+  +  D+  FPFDLN
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN

Query:  MPAPESDEEDHK
         PAPE++EED K
Subjt:  MPAPESDEEDHK

KAG7034043.1 Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-5260.56Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP
        MERDHN     +    GGG     G+TPP T T   +DVVVSS               S  E SG+KRGRAE+  GGSS G G KGKKKGEL DPPSTDP
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPF
        KCATCGK FGSWKAVFGHLRSHPERDYRGAFPPPK+WEEML+QEA        QGSS T +G       G S PSGRGIGIDLNDP++  +   + GFPF
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPF

Query:  DLNMPAPESDEED
        DLNMPAPE++E+D
Subjt:  DLNMPAPESDEED

XP_011658503.1 uncharacterized protein LOC105436035 [Cucumis sativus]4.6e-5259.62Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCAT
        ME+D + + S S    GG   D            D       P     D+ ++ SPQE+ G+KRGR E+  GGSSSG G KGKKKGEL DPPSTDPKCAT
Subjt:  MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCAT

Query:  CGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAP
        CGKIFGSWKAVFGHLRSHPERDYRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGIGIDLNDPE      D+  FPFDLN PAP
Subjt:  CGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAP

Query:  ESDEEDHK
        E++EED K
Subjt:  ESDEEDHK

XP_022132655.1 uncharacterized protein LOC111005461 [Momordica charantia]2.0e-10399.48Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVF
        MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGEL DPPSTDPKCATCGKIFGSWKAVF
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVF

Query:  GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK
        GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK
Subjt:  GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK

XP_038882231.1 zinc finger protein ZAT4-like [Benincasa hispida]7.6e-5563.16Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGF-EDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDP
        MERD  ++ S  +   GGG     GN+PPK PT    EDVVVSS               SPQE+ GKKRGR E++ G S+ GG KGKKKGEL DPPST+P
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGF-EDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPA
        KCATCGK FGSWKAVFGHLRSHPER+YRGAFPPPK+WEEMLRQE  RRQH  D+GSS    G   +  SGRGI IDLNDPE+P +  DK  FPFDLNMPA
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPA

Query:  PESDEEDHK
        PE+DEED K
Subjt:  PESDEEDHK

TrEMBL top hitse value%identityAlignment
A0A0A0KGW4 C2H2-type domain-containing protein2.2e-5259.62Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCAT
        ME+D + + S S    GG   D            D       P     D+ ++ SPQE+ G+KRGR E+  GGSSSG G KGKKKGEL DPPSTDPKCAT
Subjt:  MERDHNNQDSSSDEHRGGGSDDV-----------DGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDPKCAT

Query:  CGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAP
        CGKIFGSWKAVFGHLRSHPERDYRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGIGIDLNDPE      D+  FPFDLN PAP
Subjt:  CGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAP

Query:  ESDEEDHK
        E++EED K
Subjt:  ESDEEDHK

A0A1S3B298 zinc finger protein ZAT41.4e-5160.38Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP
        ME+DH+    S   + G G D    +TP K  T   E DV VSS              SPQE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST P
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN
        KCATCGK FGSWKAVFGHLRSHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDLNDPE+  +  D+  FPFDLN
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN

Query:  MPAPESDEEDHK
         PAPE++EED K
Subjt:  MPAPESDEEDHK

A0A5D3CPY3 Zinc finger protein ZAT44.9e-5260.85Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP
        ME+DH+    S   + G GSD    +TP K  T   E DV VSS              SPQE+ G+KRGRAE+  GGSSSG G KGKKKGEL DPPST P
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFE-DVVVSS--------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN
        KCATCGK FGSWKAVFGHLRSHPER+YRGAFPPPK+WEEML+QE +RRQHGQ +GSS   +      +S PSGRGI IDLNDPE+  +  D+  FPFDLN
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEM---GTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLN

Query:  MPAPESDEEDHK
         PAPE++EED K
Subjt:  MPAPESDEEDHK

A0A6J1BT29 uncharacterized protein LOC1110054619.5e-10499.48Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVF
        MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGEL DPPSTDPKCATCGKIFGSWKAVF
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVF

Query:  GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK
        GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK
Subjt:  GHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK

A0A6J1GEL2 uncharacterized protein LOC1114534686.5e-5260.56Show/hide
Query:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP
        MERDHN     +    GGG     G TPP T T   +DVVVSS               S  E SG+KRGRAE+  GGSS G G KGKKKGEL DPPSTDP
Subjt:  MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSS---------------SPQETSGKKRGRAEEQAGGSSSGGG-KGKKKGELTDPPSTDP

Query:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPF
        KCATCGK FGSWKAVFGHLRSHPERDYRGAFPPPK+WEEML+QEA        QGSS T +G       G S PSGRGIGIDLNDP++  +   + GFPF
Subjt:  KCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMG------TGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPF

Query:  DLNMPAPESDEED
        DLNMPAPE++E+D
Subjt:  DLNMPAPESDEED

SwissProt top hitse value%identityAlignment
O65499 Zinc finger protein ZAT32.7e-0741.25Show/hide
Query:  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP
        +SSS   +  KKR +    +  SS       K  +  DP  P     C  CG+ F SWKA+FGH+R HPER +RG  PPP
Subjt:  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP

Q9SIJ0 Zinc finger protein ZAT22.8e-0436.17Show/hide
Query:  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD--PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP
        N+ P +        V   S  +   +KR +      GSSS   + K   +  DP ++     C  CGK FGS KA+FGH+R HPER +RG  PP
Subjt:  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD--PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP

Arabidopsis top hitse value%identityAlignment
AT2G17180.1 C2H2-like zinc finger protein2.0e-0536.17Show/hide
Query:  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD--PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP
        N+ P +        V   S  +   +KR +      GSSS   + K   +  DP ++     C  CGK FGS KA+FGH+R HPER +RG  PP
Subjt:  NTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTD--PKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPP

AT4G35280.1 C2H2-like zinc finger protein1.9e-0841.25Show/hide
Query:  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP
        +SSS   +  KKR +    +  SS       K  +  DP  P     C  CG+ F SWKA+FGH+R HPER +RG  PPP
Subjt:  VSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDP--PSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP

AT4G35610.1 zinc finger (C2H2 type) family protein5.8e-1335.63Show/hide
Query:  KKRGRAEEQAGGSSSGGGKG------KKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP--KMWEEMLRQEAVR-----------
        K R R   Q      G G+G      KK  ELT PP   P C  CG+ FGSWKAVFGH+R+H +R+Y+G  PPP      E      +R           
Subjt:  KKRGRAEEQAGGSSSGGGKG------KKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP--KMWEEMLRQEAVR-----------

Query:  ---------RQHGQDQGSSTTEMGTGTSSPSGRGIGIDLN-DPEKPHSPPDKGG--FPFDLNMPAPESDEEDHK
                 R  G   GS     G    S  GRG GIDLN +P +      + G    FDLN   P+ +EE+ K
Subjt:  ---------RQHGQDQGSSTTEMGTGTSSPSGRGIGIDLN-DPEKPHSPPDKGG--FPFDLNMPAPESDEEDHK

AT4G35700.1 zinc finger (C2H2 type) family protein1.0e-0937.67Show/hide
Query:  KGKKKG--ELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP--KMWEEMLRQEAVRRQHGQ--------DQGSSTTEMGTGTSSPSGRG
        K +KKG  +LT  P   P C  CGK F SWKAVFGHLR H +R Y G  PPP     EE     A     G         +  ++++  G  T+S  G G
Subjt:  KGKKKG--ELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPP--KMWEEMLRQEAVRRQHGQ--------DQGSSTTEMGTGTSSPSGRG

Query:  I-------GIDLN-DPEKPHSPPDKGGF--PFDLN-MPAPESDEED
        +        IDLN DP +        G    FDLN  P P+ DEE+
Subjt:  I-------GIDLN-DPEKPHSPPDKGGF--PFDLN-MPAPESDEED

AT5G56200.1 C2H2 type zinc finger transcription factor family9.0e-0648.57Show/hide
Query:  CATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM
        C  C K F S KA++GH+R HP+R ++G  PPP +
Subjt:  CATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGGACCATAACAACCAAGACTCCTCCTCCGACGAGCACCGCGGTGGTGGCAGCGACGATGTCGATGGCAACACCCCTCCCAAGACTCCTACCGGTGGCTTCGA
GGACGTCGTAGTTTCTTCTTCCCCGCAGGAGACTTCTGGGAAGAAGAGAGGGCGAGCCGAGGAGCAAGCAGGAGGGTCGAGTAGTGGCGGCGGGAAGGGGAAGAAGAAGG
GGGAACTGACCGACCCGCCCTCCACCGACCCGAAATGCGCCACGTGTGGCAAGATTTTCGGCTCGTGGAAGGCGGTATTCGGGCACCTACGGTCCCACCCGGAGCGGGAC
TACCGCGGGGCCTTCCCGCCGCCGAAAATGTGGGAGGAGATGCTTCGGCAGGAGGCAGTGCGGCGGCAGCATGGTCAAGACCAAGGCAGCAGCACCACAGAGATGGGGAC
AGGGACGTCTTCTCCGTCCGGCCGGGGGATCGGAATCGATCTTAATGACCCGGAAAAGCCCCACAGCCCGCCGGATAAGGGCGGCTTCCCGTTTGATCTCAACATGCCGG
CACCGGAGAGTGACGAGGAGGATCACAAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGGACCATAACAACCAAGACTCCTCCTCCGACGAGCACCGCGGTGGTGGCAGCGACGATGTCGATGGCAACACCCCTCCCAAGACTCCTACCGGTGGCTTCGA
GGACGTCGTAGTTTCTTCTTCCCCGCAGGAGACTTCTGGGAAGAAGAGAGGGCGAGCCGAGGAGCAAGCAGGAGGGTCGAGTAGTGGCGGCGGGAAGGGGAAGAAGAAGG
GGGAACTGACCGACCCGCCCTCCACCGACCCGAAATGCGCCACGTGTGGCAAGATTTTCGGCTCGTGGAAGGCGGTATTCGGGCACCTACGGTCCCACCCGGAGCGGGAC
TACCGCGGGGCCTTCCCGCCGCCGAAAATGTGGGAGGAGATGCTTCGGCAGGAGGCAGTGCGGCGGCAGCATGGTCAAGACCAAGGCAGCAGCACCACAGAGATGGGGAC
AGGGACGTCTTCTCCGTCCGGCCGGGGGATCGGAATCGATCTTAATGACCCGGAAAAGCCCCACAGCCCGCCGGATAAGGGCGGCTTCCCGTTTGATCTCAACATGCCGG
CACCGGAGAGTGACGAGGAGGATCACAAA
Protein sequenceShow/hide protein sequence
MERDHNNQDSSSDEHRGGGSDDVDGNTPPKTPTGGFEDVVVSSSPQETSGKKRGRAEEQAGGSSSGGGKGKKKGELTDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERD
YRGAFPPPKMWEEMLRQEAVRRQHGQDQGSSTTEMGTGTSSPSGRGIGIDLNDPEKPHSPPDKGGFPFDLNMPAPESDEEDHK