; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010670 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010670
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationscaffold35:1298611..1299381
RNA-Seq ExpressionMS010670
SyntenyMS010670
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]1.3e-13997.67Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]1.7e-13997.28Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

XP_022133202.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Momordica charantia]3.4e-143100Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]3.1e-13695.33Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDNDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL E+R+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFAS E+AKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]3.0e-13997.28Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVA+EVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein6.4e-14097.67Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X18.4e-14097.28Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1BYF3 heterogeneous nuclear ribonucleoprotein H2 isoform X11.6e-143100Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1EFC5 heterogeneous nuclear ribonucleoprotein H2-like isoform X14.3e-13694.94Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQPYGYGSFPPT AFPVVRLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSV KS+I EFFGEFDL EDR+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFAS EEAKRAMSKDKM IGSRYVELFPST NEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X12.5e-13695.33Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPT AFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI
        +QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+NDY+GSPPPRQKR SDKDQMEYTEILKLRGLPFSVTKSNI EFFGEFDL E+R+HI
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHI

Query:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        ASRPDGKATGEAYVEFASAEEAKRAMSKDKM IGSRYVELFPSTPNEARRAESRSRQ
Subjt:  ASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

SwissProt top hitse value%identityAlignment
B2RYD2 Epithelial splicing regulatory protein 11.7e-2535.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+ K K ++G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

P52597 Heterogeneous nuclear ribonucleoprotein F1.7e-2535.64Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I +FF   ++  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q3US41 Epithelial splicing regulatory protein 11.3e-2535.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+ K K ++G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Q60HC3 Heterogeneous nuclear ribonucleoprotein F1.7e-2535.64Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDY

Query:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNE
          S P      +D         ++LRGLPF  TK  I +FF   ++  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F S+  E
Subjt:  HGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNE

Query:  AR
         R
Subjt:  AR

Q6NXG1 Epithelial splicing regulatory protein 11.7e-2535.58Show/hide
Query:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N           
Subjt:  VVRLRGLPFNCTDIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHG

Query:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN
               +F  K   E   I+++RGLPF+ T   +  FFG+   +T  ++ +   + PDG+ TG+A+V FA  E A+ A+ K K ++G RY+ELF ST  
Subjt:  SPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEF-DLT--EDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPN

Query:  EARRAESR
        E ++  +R
Subjt:  EARRAESR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-6245.83Show/hide
Query:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   DG E+G KRQRM++   P P++    SS   + PYG+ + PP P FP VRLRGLPF+C ++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE
         +QV+FALQ++RQNMGRRYVEVFR  +Q+YY A+A EV    ++                               GS P R   + R SD  K+ +E+T 
Subjt:  SMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY--------------------------DNDYHGSPPPR---QKRFSD--KDQMEYTE

Query:  ILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFS  K +I +FF +F+L+ED VH+    +G+ TGEA+VEF +AE+++ AM KD+  +GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-0731.76Show/hide
Query:  LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED + +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-0731.76Show/hide
Query:  LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESR
        L + G+P+ +    + ++  +F   ED + +  R  G++ G  YV FASAE+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.1e-9567.82Show/hide
Query:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS
        AM GSG    GYEVGSKRQRMM+ NPY AV +    F P+GY        FPVVRLRGLPFNC DIDIF+FFAGL+IVDVLLV+KNG+F GEAFVVFAG 
Subjt:  AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGS

Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTED
        MQVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  I EFF  + + + 
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTED

Query:  RVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        RV +  RPDGKATGEA+VEF + EEA+RAM+KDKM IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-5567.08Show/hide
Query:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTED
        MQVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ +   SPPP    R KRFS+K+++EYTE+LK+RGLP+SV K  I EFF  + + + 
Subjt:  MQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPP----RQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTED

Query:  RVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ
        RV +  RPDGKATGEA+VEF + EEA+RAM+KDKM IGSRYVELFP+T  EARRAE+RSRQ
Subjt:  RVHIASRPDGKATGEAYVEFASAEEAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATT
TCAACCTTACGGCTATGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTTAGAGGACTTCCCTTTAACTGCACCGACATCGACATTTTCAAGTTCTTTGCTG
GACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGGTCCATGCAGGTTGAGTTCGCACTGCAGCGGGAT
CGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATCTATGATAATGACTA
CCATGGAAGCCCTCCTCCTCGGCAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTAACGAAATCCAACA
TCACTGAATTTTTTGGAGAGTTTGACCTCACAGAAGATAGGGTACATATTGCAAGTCGTCCAGATGGGAAGGCAACTGGTGAGGCATACGTGGAGTTTGCTTCAGCAGAG
GAGGCAAAGAGAGCAATGAGCAAGGACAAGATGATGATTGGATCAAGATATGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACA
G
mRNA sequenceShow/hide mRNA sequence
GCAATGTTGGGAAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCAAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCTGGATT
TCAACCTTACGGCTATGGGAGTTTTCCACCTACTCCTGCCTTTCCTGTGGTTCGCCTTAGAGGACTTCCCTTTAACTGCACCGACATCGACATTTTCAAGTTCTTTGCTG
GACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGACGGTTCATGGGAGAGGCCTTTGTTGTCTTTGCTGGGTCCATGCAGGTTGAGTTCGCACTGCAGCGGGAT
CGACAGAATATGGGGCGTAGGTACGTAGAAGTCTTCAGGTGCAAAAGGCAGGATTATTATAATGCTGTTGCTGCTGAAGTAAATTATGAGGGCATCTATGATAATGACTA
CCATGGAAGCCCTCCTCCTCGGCAAAAGAGGTTCAGTGACAAGGACCAGATGGAATACACTGAGATACTGAAGCTGCGTGGTCTCCCCTTCTCTGTAACGAAATCCAACA
TCACTGAATTTTTTGGAGAGTTTGACCTCACAGAAGATAGGGTACATATTGCAAGTCGTCCAGATGGGAAGGCAACTGGTGAGGCATACGTGGAGTTTGCTTCAGCAGAG
GAGGCAAAGAGAGCAATGAGCAAGGACAAGATGATGATTGGATCAAGATATGTGGAGTTGTTTCCTTCAACCCCAAATGAAGCTAGAAGAGCTGAGTCAAGGTCAAGACA
G
Protein sequenceShow/hide protein sequence
AMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQPYGYGSFPPTPAFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSMQVEFALQRD
RQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNDYHGSPPPRQKRFSDKDQMEYTEILKLRGLPFSVTKSNITEFFGEFDLTEDRVHIASRPDGKATGEAYVEFASAE
EAKRAMSKDKMMIGSRYVELFPSTPNEARRAESRSRQ