; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010672 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010672
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein L11
Genome locationscaffold35:1309922..1310386
RNA-Seq ExpressionMS010672
SyntenyMS010672
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034038.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL++KHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_008449842.1 PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo]3.5e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_022132985.1 54S ribosomal protein L19, mitochondrial [Momordica charantia]2.2e-81100Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_022977323.1 54S ribosomal protein L19, mitochondrial-like [Cucurbita maxima]2.1e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS R
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL+LKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

XP_038901904.1 54S ribosomal protein L19, mitochondrial [Benincasa hispida]9.3e-8097.42Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKEL+
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

TrEMBL top hitse value%identityAlignment
A0A1S3BMZ5 54S ribosomal protein L19, mitochondrial1.7e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A5A7T9U7 54S ribosomal protein L191.7e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1BU21 54S ribosomal protein L19, mitochondrial1.1e-81100Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like1.0e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGS R
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTL+LKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

A0A6J1KUS1 54S ribosomal protein L19, mitochondrial-like6.5e-7996.77Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYK DTPMAVTITAFKDNTFEFTVKSPSVTWYLKK+AGI+SGSSR
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANS GIKVVKELD
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

SwissProt top hitse value%identityAlignment
A7HWQ0 50S ribosomal protein L112.0e-2946.48Show/hide
Query:  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQK +   P+ V ITAF D +F F +K+P  +++LKKAA + SGS  PG   A T++
Subjt:  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLS

Query:  LKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK
        +    EIA+ K +D       L+   K I G+A SMG++VV+
Subjt:  LKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK

Q2RQU9 50S ribosomal protein L111.6e-2947.06Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYE
        I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQ  +P  P+ V ITA+ D TF +  K+P +T++LKKAAGI  GS+ PG   A T++++ + +
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYE

Query:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK
        IA+ K  D       +E+  + ++G+A SMG++VV+
Subjt:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVK

Q9UTK2 54S ribosomal protein L19, mitochondrial9.5e-3552.59Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYE
        I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   ++ GSS P H +   LSLKHIYE
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYE

Query:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVV
        IAK+K +DP  Q + L S+CKS+IGTA SMG+KVV
Subjt:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVV

Q9VFJ2 39S ribosomal protein L11, mitochondrial5.4e-3039.35Show/hide
Query:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR
        + +LK+ + R   ++ ++  +PAG A   PP+GP LGQ  +N+ AFCKDFNA+T + K   P+   I+   D +++  +  P  T++LK+AAGI  G+  
Subjt:  MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSR

Query:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        PG  VA  ++LKH+YEIA +K  DP    + ++ +C+ +I  A + GIKVV+E+D
Subjt:  PGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

Q9Y3B7 39S ribosomal protein L11, mitochondrial1.6e-2944.97Show/hide
Query:  LTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVAS
        L +  V   IR  V AG A P PP+GP LGQ  +++  FCK+FN RT+  K   P+   I    D TFE  +  P+V+++LK AAGI+ G+ + G  VA 
Subjt:  LTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVAS

Query:  TLSLKHIYEIAKVKQSDP--YCQYMPLESICKSIIGTANSMGIKVVKEL
         ++LKH+YEIA++K  D     Q +PL S+ +SIIG+A S+GI+VVK+L
Subjt:  TLSLKHIYEIAKVKQSDP--YCQYMPLESICKSIIGTANSMGIKVVKEL

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l114.2e-2242.14Show/hide
Query:  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG++ GS  P       ++
Subjt:  RPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLS

Query:  LKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        +  +  IA  K  D  C    +ES  + I GTA +MGI +
Subjt:  LKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

AT4G35490.1 mitochondrial ribosomal protein L113.7e-7484.42Show/hide
Query:  ATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRP
        A  KEIL RRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG+D GS+RP
Subjt:  ATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRP

Query:  GHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD
        GH+  +TLS++H+YEIAKVKQ+DP+CQYMPLESICKSIIGTANSMGIK+V++L+
Subjt:  GHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD

AT5G51610.1 Ribosomal protein L11 family protein6.6e-0732.91Show/hide
Query:  DNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        D +F F +K+P  ++ L KAAG+  GS  P  +    +++  + +IA+VK  +  C    + S  ++I GTA +MGI +
Subjt:  DNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLSLKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGAAAGAGATCCTAACCAGGCGACCTGTCTCTGCCACCATCAGGCTCACCGTGCCTGCCGGCGGAGCCCGCCCAGCGCCGCCAGTGGGTCCGGCGCTCGG
TCAGTATCGGCTGAATCTTATGGCGTTCTGCAAAGATTTCAATGCCAGGACCCAGAAGTACAAGCCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CCTTCGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGACTCCGGGAGCAGCCGCCCAGGCCACGTGGTCGCCTCCACGCTCTCC
CTCAAGCACATTTACGAGATCGCTAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCGTTGGAGTCCATTTGTAAGTCCATTATCGGCACTGCGAATAGCATGGG
AATTAAGGTTGTTAAGGAATTGGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGAAAGAGATCCTAACCAGGCGACCTGTCTCTGCCACCATCAGGCTCACCGTGCCTGCCGGCGGAGCCCGCCCAGCGCCGCCAGTGGGTCCGGCGCTCGG
TCAGTATCGGCTGAATCTTATGGCGTTCTGCAAAGATTTCAATGCCAGGACCCAGAAGTACAAGCCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CCTTCGAGTTCACCGTCAAGTCGCCGTCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGACTCCGGGAGCAGCCGCCCAGGCCACGTGGTCGCCTCCACGCTCTCC
CTCAAGCACATTTACGAGATCGCTAAAGTCAAGCAGTCCGATCCTTATTGCCAGTACATGCCGTTGGAGTCCATTTGTAAGTCCATTATCGGCACTGCGAATAGCATGGG
AATTAAGGTTGTTAAGGAATTGGAT
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIDSGSSRPGHVVASTLS
LKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD