; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010687 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010687
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA binding;sequence-specific DNA binding transcription factors
Genome locationscaffold35:1413579..1414043
RNA-Seq ExpressionMS010687
SyntenyMS010687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025593.1 hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa]3.5e-2657.24Show/hide
Query:  SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGS
        SSPPEI NVK+QH+ D      + G SFD D     VFDFPWLKD LI SKS+DWKFEDVFFTS+ +  +ST D    LTIGT AFTE            
Subjt:  SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGS

Query:  LPDP----YEAEAL----PALDGG--GAEGMDCIWNSLLNQPLRQ
        LPDP    YEA+AL    P+LDGG  G EGMDCIW S+LNQPL+Q
Subjt:  LPDP----YEAEAL----PALDGG--GAEGMDCIWNSLLNQPLRQ

KAG6594718.1 hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2953.14Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERS-YSSPPEIGN-VKKQHTDGGGGQGATGRSFDLD----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGA
        MDR N KR RES S+S++S+  + +  R+  SS PEIGN  K+QH +G       GR FDLD    VFDFPWLKDSLI SK EDWK EDVFFTS D  G 
Subjt:  MDRHNTKRARESLSASAASADDAVSYERS-YSSPPEIGN-VKKQHTDGGGGQGATGRSFDLD----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGA

Query:  STADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL---------DGGGAEGMDCIWNSLLNQPLRQ
        ST  D      A TE S QL+WC   +LPDP    YEA   PA          +G   EGMDC+WNSLLNQPL+Q
Subjt:  STADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL---------DGGGAEGMDCIWNSLLNQPLRQ

KAG6603846.1 hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia]8.6e-2553.49Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGRSFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNG
        MDR +TKR RES      SA+         SS PEIGN KKQ   GG          T   FDL   VFDFPWLK+SLI S+SEDWK +DVFFTS   NG
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGRSFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNG

Query:  ASTADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ
         STAD T TIGT  +  SGQL+W    +LPDP    YEA+  P    DGGG    EG+DCIW+SLLNQPL+Q
Subjt:  ASTADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ

KGN49015.1 hypothetical protein Csa_004415 [Cucumis sativus]4.7e-3156.07Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGAS
        M+RHNTKR RE  S+S +S  D + Y++  SS PEI NVK+QH+     + + G SFD D     VFDFPWLKD LI SKS+DWKFEDVFFTS+  NGAS
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGAS

Query:  TAD--DTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ
        TAD    LTIGTAFTE            LPDP    YEA+A     P+LDGG  G E MDCIW S+LNQPL+Q
Subjt:  TAD--DTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ

XP_022132712.1 uncharacterized protein LOC111005508, partial [Momordica charantia]5.0e-6598.46Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL
        MDRHNTKRARESLSASAAS+DDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRS DLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL

Query:  TIGTAFTELSGQLLWCDPGSLPDPYEAEAL
        TIGTAFTELSGQLLWCDPGSLPDPYEAEAL
Subjt:  TIGTAFTELSGQLLWCDPGSLPDPYEAEAL

TrEMBL top hitse value%identityAlignment
A0A0A0KH39 Uncharacterized protein2.3e-3156.07Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGAS
        M+RHNTKR RE  S+S +S  D + Y++  SS PEI NVK+QH+     + + G SFD D     VFDFPWLKD LI SKS+DWKFEDVFFTS+  NGAS
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGAS

Query:  TAD--DTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ
        TAD    LTIGTAFTE            LPDP    YEA+A     P+LDGG  G E MDCIW S+LNQPL+Q
Subjt:  TAD--DTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEA----LPALDGG--GAEGMDCIWNSLLNQPLRQ

A0A5A7SLQ6 Uncharacterized protein1.7e-2657.24Show/hide
Query:  SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGS
        SSPPEI NVK+QH+ D      + G SFD D     VFDFPWLKD LI SKS+DWKFEDVFFTS+ +  +ST D    LTIGT AFTE            
Subjt:  SSPPEIGNVKKQHT-DGGGGQGATGRSFDLD-----VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTAD--DTLTIGT-AFTELSGQLLWCDPGS

Query:  LPDP----YEAEAL----PALDGG--GAEGMDCIWNSLLNQPLRQ
        LPDP    YEA+AL    P+LDGG  G EGMDCIW S+LNQPL+Q
Subjt:  LPDP----YEAEAL----PALDGG--GAEGMDCIWNSLLNQPLRQ

A0A6J1BUL5 uncharacterized protein LOC1110055082.4e-6598.46Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL
        MDRHNTKRARESLSASAAS+DDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRS DLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTL

Query:  TIGTAFTELSGQLLWCDPGSLPDPYEAEAL
        TIGTAFTELSGQLLWCDPGSLPDPYEAEAL
Subjt:  TIGTAFTELSGQLLWCDPGSLPDPYEAEAL

A0A6J1IJM6 uncharacterized protein LOC1114780291.3e-2352.33Show/hide
Query:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGRSFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNG
        M+R +TKR RES      SA+         SS  EIGN KKQ   GG          T   FDL   VFDFPWLK+SLI S+SEDWK +DVFFTS   NG
Subjt:  MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQG-----ATGRSFDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNG

Query:  ASTADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ
         STAD T +IGT  +  SGQL+W    +LPDP    YEA+  P    DGGG    EGMDCIW+SLLNQPL+Q
Subjt:  ASTADDTLTIGTAFTELSGQLLWCDPGSLPDP----YEAEALPAL--DGGG---AEGMDCIWNSLLNQPLRQ

A0A6P9ENN9 uncharacterized protein LOC108996550 isoform X27.8e-1644.53Show/hide
Query:  EIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGSLP-------DPYEA
        EI N+KK           +  + D+ VFDFPWLKD +ISKSEDW+FED F +SL  +  ST        TA  E SGQ L   P  +P       D    
Subjt:  EIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGSLP-------DPYEA

Query:  EALPALDGGGAEGMDCIWNSLLNQPLRQ
         A+P  DG   EG+DCIW+SLL+QPL+Q
Subjt:  EALPALDGGGAEGMDCIWNSLLNQPLRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64800.1 DNA binding;sequence-specific DNA binding transcription factors3.0e-0430.43Show/hide
Query:  LDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGSLPDPYEAEALPALDGGGAEGMDCIWNSLLN
        L VF+FPW+K+S+IS S DW   +  F  LD             G    E    + W  P      Y  E          E  +CIW S+L+
Subjt:  LDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQLLWCDPGSLPDPYEAEALPALDGGGAEGMDCIWNSLLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGCCACAACACCAAGCGAGCCAGAGAATCATTATCAGCATCAGCCGCATCAGCCGATGATGCTGTGAGCTACGAGCGATCTTATTCTTCGCCGCCGGAGATCGG
CAACGTGAAGAAGCAGCATACCGACGGCGGCGGCGGGCAGGGAGCCACTGGAAGGTCGTTTGATTTGGACGTGTTCGATTTCCCGTGGTTGAAGGACAGCCTGATTTCGA
AATCGGAGGACTGGAAATTCGAGGACGTCTTCTTCACGTCCTTGGACAGTAACGGAGCGTCCACCGCGGACGATACGCTCACAATTGGAACGGCGTTTACGGAGTTGTCG
GGGCAATTGCTGTGGTGCGATCCTGGATCGTTGCCGGATCCTTACGAGGCGGAGGCGCTGCCGGCGTTGGACGGCGGAGGGGCGGAGGGGATGGATTGTATTTGGAACTC
CCTGCTAAATCAGCCGCTCCGACAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGCCACAACACCAAGCGAGCCAGAGAATCATTATCAGCATCAGCCGCATCAGCCGATGATGCTGTGAGCTACGAGCGATCTTATTCTTCGCCGCCGGAGATCGG
CAACGTGAAGAAGCAGCATACCGACGGCGGCGGCGGGCAGGGAGCCACTGGAAGGTCGTTTGATTTGGACGTGTTCGATTTCCCGTGGTTGAAGGACAGCCTGATTTCGA
AATCGGAGGACTGGAAATTCGAGGACGTCTTCTTCACGTCCTTGGACAGTAACGGAGCGTCCACCGCGGACGATACGCTCACAATTGGAACGGCGTTTACGGAGTTGTCG
GGGCAATTGCTGTGGTGCGATCCTGGATCGTTGCCGGATCCTTACGAGGCGGAGGCGCTGCCGGCGTTGGACGGCGGAGGGGCGGAGGGGATGGATTGTATTTGGAACTC
CCTGCTAAATCAGCCGCTCCGACAA
Protein sequenceShow/hide protein sequence
MDRHNTKRARESLSASAASADDAVSYERSYSSPPEIGNVKKQHTDGGGGQGATGRSFDLDVFDFPWLKDSLISKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELS
GQLLWCDPGSLPDPYEAEALPALDGGGAEGMDCIWNSLLNQPLRQ