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MS010706 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010706
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA oxidative demethylase ALKBH2
Genome locationscaffold35:1501531..1501732
RNA-Seq ExpressionMS010706
SyntenyMS010706
Gene Ontology termsGO:0006307 - DNA dealkylation involved in DNA repair (biological process)
GO:0035511 - oxidative DNA demethylation (biological process)
GO:0008198 - ferrous iron binding (molecular function)
GO:0043734 - DNA-N1-methyladenine dioxygenase activity (molecular function)
GO:0051747 - cytosine C-5 DNA demethylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025581.1 DNA oxidative demethylase ALKBH2 [Cucumis melo var. makuwa]4.0e-1163.49Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SE+ET  P P DLG+R+ LDLG   E    S+FV    SDQAWTWFD LN+RIPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
KAG6603836.1 DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
XP_022950476.1 DNA oxidative demethylase ALKBH2 isoform X1 [Cucurbita moschata]2.3e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
XP_022950477.1 DNA oxidative demethylase ALKBH2 isoform X2 [Cucurbita moschata]2.3e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
XP_022977708.1 DNA oxidative demethylase ALKBH2 [Cucurbita maxima]2.3e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
TrEMBL top hitse value%identityAlignment
A0A5A7SMW2 DNA oxidative demethylase ALKBH21.9e-1163.49Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SE+ET  P P DLG+R+ LDLG   E    S+FV    SDQAWTWFD LN+RIPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
A0A6J1BTV9 DNA oxidative demethylase ALKBH21.9e-1163.49Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR  LDLG   E    ++FV    SD+AWTWFD LN+RIPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
A0A6J1GEX8 DNA oxidative demethylase ALKBH2 isoform X11.1e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
A0A6J1GEX9 DNA oxidative demethylase ALKBH2 isoform X21.1e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
A0A6J1IQU8 DNA oxidative demethylase ALKBH21.1e-1165.08Show/hide
Query:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        SESET  P P DLGRR+ LDLG   E    S+FV    SDQAWTWFD LN+ IPWT PTIRVF
Subjt:  SESETTAPHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
SwissProt top hitse value%identityAlignment
Q9SIE0 DNA oxidative demethylase ALKBH21.3e-0442.11Show/hide
Query:  APHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        +P  S+   R+ +DLG   +     RF+ +    Q+WT+FD L++ IPWT PTIRVF
Subjt:  APHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
Arabidopsis top hitse value%identityAlignment
AT2G22260.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein9.1e-0642.11Show/hide
Query:  APHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF
        +P  S+   R+ +DLG   +     RF+ +    Q+WT+FD L++ IPWT PTIRVF
Subjt:  APHPSDLGRRRRLDLGTEIE-AKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTTCAGAGTAGTCTCAGAATCGGAGACGACGGCCCCTCACCCTTCTGATTTAGGAAGGCGACGCAGATTGGATCTGGGAACCGAAATTGAAGCGAAATCAAGCAGGTT
TGTGCTGTACGGCGTCTCCGATCAGGCTTGGACGTGGTTCGATTGTCTCAATCGACGCATTCCATGGACCGGGCCAACCATTCGCGTCTTC
mRNA sequenceShow/hide mRNA sequence
AACTTCAGAGTAGTCTCAGAATCGGAGACGACGGCCCCTCACCCTTCTGATTTAGGAAGGCGACGCAGATTGGATCTGGGAACCGAAATTGAAGCGAAATCAAGCAGGTT
TGTGCTGTACGGCGTCTCCGATCAGGCTTGGACGTGGTTCGATTGTCTCAATCGACGCATTCCATGGACCGGGCCAACCATTCGCGTCTTC
Protein sequenceShow/hide protein sequence
NFRVVSESETTAPHPSDLGRRRRLDLGTEIEAKSSRFVLYGVSDQAWTWFDCLNRRIPWTGPTIRVF