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MS010712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:1530501..1530770
RNA-Seq ExpressionMS010712
SyntenyMS010712
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025575.1 hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa]7.2e-1657.61Show/hide
Query:  AITSSTVVPEVAPEPPPPFPRIREPI-KP--------ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        A T+S+ V EV   PPP   RI   I KP        ATIVVS+QQLEL+L KS  F S GIAV+FSD F+ D+ CPRWHP+LPTIPEVR++
Subjt:  AITSSTVVPEVAPEPPPPFPRIREPI-KP--------ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

KAE8647639.1 hypothetical protein Csa_004428 [Cucumis sativus]1.1e-1358.89Show/hide
Query:  AITSSTVVPEVAPE-PPPPFP-RIREPI-KPA--------TIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPE
        A T+S+ V E   E  PPP P RI   I KPA        TIVVS+QQLEL+L KS  F S GIAV+FSDSF+ D+ CPRWHP+LPTIPE
Subjt:  AITSSTVVPEVAPE-PPPPFP-RIREPI-KPA--------TIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPE

KAF9851460.1 hypothetical protein H0E87_015599 [Populus deltoides]1.2e-0766.04Show/hide
Query:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        IVV+RQQLELLL  S +F S GIAVRFS+SF+  E+  +W PSL TIPEVR F
Subjt:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

KAG6594706.1 hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1063.64Show/hide
Query:  ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        ATIVVS++QLE LL  S +F S GIAV+FSDSF+FD  C RW P LPTI EV ++
Subjt:  ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

KAG6603830.1 hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1151.04Show/hide
Query:  AITSSTVVPEVAPEPPP-------------PFPRIREPIKPATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        A T+S+ V EV    PP             P    + P K  TIVVS+QQLEL+L  S KFAS GIAV+FSDSFE D++CPRW P+LPTI EV ++
Subjt:  AITSSTVVPEVAPEPPP-------------PFPRIREPIKPATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

TrEMBL top hitse value%identityAlignment
A0A0A0KHP3 Uncharacterized protein1.0e-1558.51Show/hide
Query:  AITSSTVVPEVAPE-PPPPFP-RIREPI-KPA--------TIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        A T+S+ V E   E  PPP P RI   I KPA        TIVVS+QQLEL+L KS  F S GIAV+FSDSF+ D+ CPRWHP+LPTIPEVR++
Subjt:  AITSSTVVPEVAPE-PPPPFP-RIREPI-KPA--------TIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

A0A5D3CLY8 Uncharacterized protein3.5e-1657.61Show/hide
Query:  AITSSTVVPEVAPEPPPPFPRIREPI-KP--------ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        A T+S+ V EV   PPP   RI   I KP        ATIVVS+QQLEL+L KS  F S GIAV+FSD F+ D+ CPRWHP+LPTIPEVR++
Subjt:  AITSSTVVPEVAPEPPPPFPRIREPI-KP--------ATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

A0A5N5M953 Uncharacterized protein3.1e-0460Show/hide
Query:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEV
        IVV+RQQLELLL  S +    GIAV+FS+SF+  E   +W PSL TIPEV
Subjt:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEV

B9HD50 Uncharacterized protein1.7e-0764.15Show/hide
Query:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF
        IVV+RQQLELLL  S +F S GIAVRFS+SF+  E+  +W PSL TIPEV+ F
Subjt:  IVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTTATCAGGGCCTGAAACTGGCCATCACCAGTTCCACTGTCGTCCCAGAAGTTGCCCCTGAGCCTCCTCCTCCATTTCCTCGTATTCGTGAGCCTATTAAGCCTGCCAC
CATTGTGGTCAGCAGGCAACAGCTTGAGTTGCTTTTGGCAAAATCCGCCAAGTTTGCCTCTACAGGCATTGCTGTTCGATTCTCCGATAGTTTTGAGTTCGATGAACAAT
GCCCTCGATGGCACCCTTCCTTGCCCACCATTCCGGAGGTTCGCAGTTTC
mRNA sequenceShow/hide mRNA sequence
GCTTATCAGGGCCTGAAACTGGCCATCACCAGTTCCACTGTCGTCCCAGAAGTTGCCCCTGAGCCTCCTCCTCCATTTCCTCGTATTCGTGAGCCTATTAAGCCTGCCAC
CATTGTGGTCAGCAGGCAACAGCTTGAGTTGCTTTTGGCAAAATCCGCCAAGTTTGCCTCTACAGGCATTGCTGTTCGATTCTCCGATAGTTTTGAGTTCGATGAACAAT
GCCCTCGATGGCACCCTTCCTTGCCCACCATTCCGGAGGTTCGCAGTTTC
Protein sequenceShow/hide protein sequence
AYQGLKLAITSSTVVPEVAPEPPPPFPRIREPIKPATIVVSRQQLELLLAKSAKFASTGIAVRFSDSFEFDEQCPRWHPSLPTIPEVRSF