CuGenDBv2

Gene ID	MS010716
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold35:1546104..1546628
RNA-Seq Expression	MS010716
Synteny	MS010716
Gene Ontology terms	GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008470 - Uncharacterised protein family Ycf33

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022133418.1 uncharacterized protein LOC111005989 [Momordica charantia]

6.1e-88

99.43

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG
        MATSFR+RIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG

Query:  PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
Subjt:  PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

XP_022926795.1 uncharacterized protein LOC111433802 [Cucurbita moschata]

2.1e-59

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA
        MATS R RIHF  FP  KNPPISP L+PIN   PLR   RPLASS+P   PAKS     PSDLK I+  P E SR LI+GAVSVGV LFLMG D + A A
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPI ELLKNPI+AVLVLAIFGG IFI+SQVLSAMVGV+EFSY+YAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

XP_023003383.1 uncharacterized protein LOC111497006 [Cucurbita maxima]

4.6e-59

74.44

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA
        MATS R RIHF  FP  KNPPISP L+PIN   PLR   RPLASS+P   PAKS     P+DLK I+  P E SR LI+GAVSVGV LFLMG D + A A
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPI ELLKNPI+AVLVLAIFGG IFI+SQVLSAMVGV+EFSY+YAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

XP_023518006.1 uncharacterized protein LOC111781569 [Cucurbita pepo subsp. pepo]

9.2e-60

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA
        MATS R RIHF  FP  +NPPISP L+PIN   PLR   RPLASS+P   PAKS     PSDLK I+  P E SR LI+GAVSVGV LFLMG D + A A
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPIFELLKNPI+AVLVLAIFGG IFI+SQVLSAMVGV+EFSY+YAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

XP_023543366.1 uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]

4.6e-59

74.59

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Query:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS
        MATSFR+RI HFP  P FKNP +SP   PI A  PLR   RPLA+SAP   PAK      P D KIID  P   SR LI+GAVSVGV LFLMGCD   A 
Subjt:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTI LPIFELLKNPI+AVLVLAIFGG IF++SQVLSAMVGV+EFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BZ31 Uncharacterized protein ycf33

3.0e-88

99.43

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG
        MATSFR+RIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEG

Query:  PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
Subjt:  PLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

A0A6J1EM42 Uncharacterized protein ycf33

1.0e-59

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA
        MATS R RIHF  FP  KNPPISP L+PIN   PLR   RPLASS+P   PAKS     PSDLK I+  P E SR LI+GAVSVGV LFLMG D + A A
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPI ELLKNPI+AVLVLAIFGG IFI+SQVLSAMVGV+EFSY+YAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

A0A6J1GE79 Uncharacterized protein ycf33

1.9e-58

73.48

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Query:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS
        MATSFR+RI H P  P FKNP +SP   PI A  PLR   RPLA+SAP   PAK     +P D KIID  P   SR LI+GAVSVGV LFLMGCD   A 
Subjt:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPIFELLKNPI+AVLVLAIFGG IF++SQVLSAMVGV+EFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

A0A6J1IVK7 Uncharacterized protein ycf33

2.7e-57

72.38

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Query:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPP---AKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS
        MATSFR+RI HFP  P FK+P +SP   PI A  PLR   RPLA+SAPP   AK     +P D KIID  P   SR LI+GAVSVGV LFLMGC+ + A 
Subjt:  MATSFRARI-HFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPP---AKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTAS

Query:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTI LPI ELLKNPI+AVLVLAI GG IF++SQVLSAMVGV+EFSYDYAY
Subjt:  ALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

A0A6J1KWC7 Uncharacterized protein ycf33

2.2e-59

74.44

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Query:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA
        MATS R RIHF  FP  KNPPISP L+PIN   PLR   RPLASS+P   PAKS     P+DLK I+  P E SR LI+GAVSVGV LFLMG D + A A
Subjt:  MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAP---PAKSRPIAEPSDLKIID--PDEGSRVLIVGAVSVGVVLFLMGCDAQTASA

Query:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        LGPEGPLVEEFWDNVRRYAIYAVTVS+GALYTI LPI ELLKNPI+AVLVLAIFGG IFI+SQVLSAMVGV+EFSY+YAY
Subjt:  LGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16410.1 unknown protein

1.9e-34

56.52

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Query:  RRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFL-MGCDAQTASALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLK
        RR L + +        A+P  L +   +   R  +VG VSVG+++ L +G DA+ A ALGPEGPL+EEFWDNVRRY +YA+TVSTGAL  +F PIFELLK
Subjt:  RRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFL-MGCDAQTASALGPEGPLVEEFWDNVRRYAIYAVTVSTGALYTIFLPIFELLK

Query:  NPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY
        NPISA+L+L I GG  +IVSQV+SAM+GV+EF+Y Y+Y
Subjt:  NPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

Sequences

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CDS sequence

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ATGGCTACCTCTTTCAGAGCTCGAATCCACTTCCCAAATTTCCCCCTTTTTAAAAACCCACCAATTTCTCCCCGTCTACTCCCAATCAACGCCGCCCCGCCCCTCCGACG
CCGTCGCCGGCCACTCGCATCCTCAGCGCCGCCGGCGAAATCCAGACCAATCGCTGAGCCGTCGGATTTGAAGATCATCGACCCAGATGAGGGGTCAAGGGTCCTGATCG
TGGGAGCGGTTTCGGTGGGCGTGGTCCTGTTTCTGATGGGGTGCGACGCCCAAACGGCGTCGGCTTTGGGGCCCGAAGGGCCGTTGGTGGAGGAATTTTGGGACAATGTG
AGAAGATATGCAATTTACGCCGTTACTGTGAGTACCGGTGCTCTTTACACCATTTTCCTGCCCATTTTCGAGCTCCTGAAGAACCCAATTTCTGCTGTTCTTGTTTTGGC
TATTTTTGGGGGTGGGATTTTCATTGTCTCCCAGGTGCTCTCTGCCATGGTTGGTGTCTCTGAATTTTCCTATGATTATGCCTAT

mRNA sequence

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Protein sequence

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MATSFRARIHFPNFPLFKNPPISPRLLPINAAPPLRRRRRPLASSAPPAKSRPIAEPSDLKIIDPDEGSRVLIVGAVSVGVVLFLMGCDAQTASALGPEGPLVEEFWDNV
RRYAIYAVTVSTGALYTIFLPIFELLKNPISAVLVLAIFGGGIFIVSQVLSAMVGVSEFSYDYAY

MS010716 (gene) of Bitter gourd (TR) v1 genome