; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010717 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010717
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:1549330..1549755
RNA-Seq ExpressionMS010717
SyntenyMS010717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9664391.1 hypothetical protein SADUNF_Sadunf16G0013700 [Salix dunnii]6.0e-0939.46Show/hide
Query:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLS----SHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLV
        M N +  P+V  SSIALLQ+RFR L RVK MREE+EL K+L+ S    S T+ + P+A   FF  PEL++   + PPR  LSL P +Q ++ G       
Subjt:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLS----SHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLV

Query:  DLW--PAPDAINACDDRSTASLIRIDD-DDNIDDSDSCSEVDTSLHL
          W    P  +++   ++ ++   +D  DD+  D D   ++DTSLHL
Subjt:  DLW--PAPDAINACDDRSTASLIRIDD-DDNIDDSDSCSEVDTSLHL

KAG5039132.1 hypothetical protein JHK86_019972 [Glycine max]1.6e-0942.96Show/hide
Query:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA
        P V  SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S     +    +  FF  PEL++ + ++PP  SLSL P SQP +        +D   AP A N 
Subjt:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA

Query:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL
            ST + +      NI D DS ++  VDTSLHL
Subjt:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL

KAG6594702.1 hypothetical protein SDJN03_11255, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1140.79Show/hide
Query:  PPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSS-------HTLLHFPTAVGTFFWRPELMMITAAAP-----PRTSLSLSPIS-QPQK-----V
        P LV  SSIALLQ+RFR L +VK+MREEREL++LLSLS+       +T + F  +V T    P     T  A      P+TSLSL P S  P K     V
Subjt:  PPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSS-------HTLLHFPTAVGTFFWRPELMMITAAAP-----PRTSLSLSPIS-QPQK-----V

Query:  GAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
          +V  L++LWP      +      +++  I   ++  +SDS  +VDTSLHL
Subjt:  GAEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

PNS97230.1 hypothetical protein POPTR_016G009200 [Populus trichocarpa]2.7e-0938.51Show/hide
Query:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVD
        M N +  P+V  SSIALLQ+RFR L RVK MREE+EL K+L  S   L   + +  A    F+ PEL++   + PP   LSL P  Q ++ G        
Subjt:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVD

Query:  LW-----PAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
         W     PA  + +     S+  L+   DD   DD D    +DTSLHL
Subjt:  LW-----PAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

XP_042942642.1 uncharacterized protein LOC122276805 [Carya illinoinensis]2.1e-0935.71Show/hide
Query:  DRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSH------------TLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG---
        D   ++  SSIALLQ+RFR L RVK+MRE+REL+++L+   H              +H+       F+R EL+  + ++PP+ SLS+ P SQ +  G   
Subjt:  DRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSH------------TLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG---

Query:  ---AEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
              APL        +    DD   + L  +   +   DSDS S+VDTSLHL
Subjt:  ---AEVAPLVDLWPAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

TrEMBL top hitse value%identityAlignment
A0A0B2SB04 Uncharacterized protein7.7e-1042.96Show/hide
Query:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA
        P V  SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S     +    +  FF  PEL++ + ++PP  SLSL P SQP +        +D   AP A N 
Subjt:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA

Query:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL
            ST + +      NI D DS ++  VDTSLHL
Subjt:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL

A0A4U5QLV7 Uncharacterized protein1.4e-0838.41Show/hide
Query:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSL-----SSHTL-LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG---AE
        M   +  P+V  SSIALLQ+RFR L RVK MREEREL + +++     SS T+  H P A    F+ PEL ++   +PP   LSL P  Q ++ G    E
Subjt:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSL-----SSHTL-LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVG---AE

Query:  VAPLVDLWP--APDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
           L+ L P   P  +   D    ++    DDDD+        ++DTSLHL
Subjt:  VAPLVDLWP--APDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

A0A5N6QA05 Uncharacterized protein1.4e-0841.3Show/hide
Query:  VAPSSIALLQQRFRDLHRVKQMREERELLKLLS-LSSHTLLHFP---TAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAP---LVDLWPAP
        V  SSIALLQ+RFR L RVK+MREEREL+++L+  + H  LH P         F+  EL +I   +PP+ SLS+SP SQ ++    V     +V+ W   
Subjt:  VAPSSIALLQQRFRDLHRVKQMREERELLKLLS-LSSHTLLHFP---TAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAP---LVDLWPAP

Query:  DAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
        D     D RS+ +     D D+       S+VDTSLHL
Subjt:  DAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

B9IH40 Uncharacterized protein1.3e-0938.51Show/hide
Query:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVD
        M N +  P+V  SSIALLQ+RFR L RVK MREE+EL K+L  S   L   + +  A    F+ PEL++   + PP   LSL P  Q ++ G        
Subjt:  MNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTL---LHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVD

Query:  LW-----PAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
         W     PA  + +     S+  L+   DD   DD D    +DTSLHL
Subjt:  LW-----PAPDAINACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL

K7L3Z6 Uncharacterized protein7.7e-1042.96Show/hide
Query:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA
        P V  SSI LLQ+RFR LHRVK+MR+++ELLK+L+ S     +    +  FF  PEL++ + ++PP  SLSL P SQP +        +D   AP A N 
Subjt:  PLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINA

Query:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL
            ST + +      NI D DS ++  VDTSLHL
Subjt:  CDDRSTASLIRIDDDDNIDDSDSCSE--VDTSLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16447.1 unknown protein5.1e-0632.59Show/hide
Query:  LVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHF---PTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAI
        +V  SSI LLQ+RFR L R +++R ERELL         +L +   PT+ G F + P   + +  +  +  LSLS  S       E       WP     
Subjt:  LVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHF---PTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAI

Query:  NACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL
           DD+    + R DD            VDTSLHL
Subjt:  NACDDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAAACATGAACAACATTGACCGGCCCCCACTTGTTGCTCCCTCCTCCATTGCTCTGCTTCAACAGCGCTTCAGAGACCTCCACAGAGTCAAGCAAATGAGGGAGGAGAG
GGAGCTTCTCAAATTGCTCTCCCTTTCTTCCCACACCCTCCTCCACTTTCCTACTGCCGTTGGCACCTTCTTTTGGCGTCCGGAGTTGATGATGATCACCGCCGCCGCCC
CACCTCGGACATCTCTATCCCTCTCCCCGATCTCGCAACCCCAGAAGGTTGGCGCCGAGGTGGCGCCGCTCGTCGACTTATGGCCAGCGCCTGATGCCATCAATGCTTGT
GATGATCGTAGCACCGCCTCGTTAATTAGAATTGATGACGACGACAATATTGATGATTCGGACTCGTGTTCCGAGGTTGATACTTCTCTTCACTTG
mRNA sequenceShow/hide mRNA sequence
ACAAACATGAACAACATTGACCGGCCCCCACTTGTTGCTCCCTCCTCCATTGCTCTGCTTCAACAGCGCTTCAGAGACCTCCACAGAGTCAAGCAAATGAGGGAGGAGAG
GGAGCTTCTCAAATTGCTCTCCCTTTCTTCCCACACCCTCCTCCACTTTCCTACTGCCGTTGGCACCTTCTTTTGGCGTCCGGAGTTGATGATGATCACCGCCGCCGCCC
CACCTCGGACATCTCTATCCCTCTCCCCGATCTCGCAACCCCAGAAGGTTGGCGCCGAGGTGGCGCCGCTCGTCGACTTATGGCCAGCGCCTGATGCCATCAATGCTTGT
GATGATCGTAGCACCGCCTCGTTAATTAGAATTGATGACGACGACAATATTGATGATTCGGACTCGTGTTCCGAGGTTGATACTTCTCTTCACTTG
Protein sequenceShow/hide protein sequence
TNMNNIDRPPLVAPSSIALLQQRFRDLHRVKQMREERELLKLLSLSSHTLLHFPTAVGTFFWRPELMMITAAAPPRTSLSLSPISQPQKVGAEVAPLVDLWPAPDAINAC
DDRSTASLIRIDDDDNIDDSDSCSEVDTSLHL