; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010721 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010721
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(thale cress) hypothetical protein
Genome locationscaffold35:1570157..1570374
RNA-Seq ExpressionMS010721
SyntenyMS010721
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603822.1 hypothetical protein SDJN03_04431, partial [Cucurbita argyrosperma subsp. sororia]7.0e-0684.38Show/hide
Query:  KELLRRGWSHIPSPCGAASLPLPLGTGHETYI
        KELLR GWSHIPSPC AASLPLP GT HET I
Subjt:  KELLRRGWSHIPSPCGAASLPLPLGTGHETYI
KDO81773.1 hypothetical protein CISIN_1g039463mg [Citrus sinensis]4.4e-0864.71Show/hide
Query:  VHFRVNVVKMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
        V  +V V K  + VDGPP  ELL  G SHIPSPCGAA LPLP G  HETYI
Subjt:  VHFRVNVVKMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
KGN49921.1 hypothetical protein Csa_000564 [Cucumis sativus]1.6e-1365.75Show/hide
Query:  MRRETSARKSLTCRKQSSHISVHFRVNVV-KMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
        MRRETSARKSLT RKQ   +S  FRVNV  K    +     K++LR GWSHIPSPCGAASL LPL TGHET I
Subjt:  MRRETSARKSLTCRKQSSHISVHFRVNVV-KMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
TYI27628.1 hypothetical protein ES332_A05G190300v1 [Gossypium tomentosum]4.6e-0568.29Show/hide
Query:  MPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
        M   VDGPP  E LRR  SHIP PCGAA L L LG GHETY
Subjt:  MPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
XP_018675725.1 PREDICTED: 60S ribosomal protein L23 isoform X2 [Musa acuminata subsp. malaccensis]1.0e-0496Show/hide
Query:  WSHIPSPCGAASLPLPLGTGHETYI
        WSHIPSP GAASLPLPLGTGHETYI
Subjt:  WSHIPSPCGAASLPLPLGTGHETYI
TrEMBL top hitse value%identityAlignment
A0A067GPY0 Uncharacterized protein2.1e-0864.71Show/hide
Query:  VHFRVNVVKMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
        V  +V V K  + VDGPP  ELL  G SHIPSPCGAA LPLP G  HETYI
Subjt:  VHFRVNVVKMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
A0A0A0KQD9 Uncharacterized protein7.6e-1465.75Show/hide
Query:  MRRETSARKSLTCRKQSSHISVHFRVNVV-KMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
        MRRETSARKSLT RKQ   +S  FRVNV  K    +     K++LR GWSHIPSPCGAASL LPL TGHET I
Subjt:  MRRETSARKSLTCRKQSSHISVHFRVNVV-KMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI
A0A4S8JWP6 Uncharacterized protein1.4e-0492Show/hide
Query:  WSHIPSPCGAASLPLPLGTGHETYI
        WSHIPSP G ASLPLPLGTGHETYI
Subjt:  WSHIPSPCGAASLPLPLGTGHETYI
A0A5D2KWM5 Uncharacterized protein8.4e-0572.22Show/hide
Query:  DGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
        DGPP  E LRR  SHIP PCGAA L L LG GHETY
Subjt:  DGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
A0A5D2QH85 Uncharacterized protein2.2e-0568.29Show/hide
Query:  MPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
        M   VDGPP  E LRR  SHIP PCGAA L L LG GHETY
Subjt:  MPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35750.1 unknown protein1.8e-0763.04Show/hide
Query:  MPNGVDGPPCKELLRRGW----SHIPSPCGAASLPLPLGTGHETYI
        MP  VDG     LLR G+    SHIP PCGAASL LP GTGHE YI
Subjt:  MPNGVDGPPCKELLRRGW----SHIPSPCGAASLPLPLGTGHETYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACGGGAAACTTCTGCGAGGAAGTCTCTTACTTGTAGGAAGCAGAGTAGCCATATCTCTGTACATTTCCGAGTAAACGTCGTAAAAATGCCCAACGGCGTTGATGG
TCCTCCTTGTAAGGAGCTCCTCCGCCGTGGGTGGTCTCATATTCCATCGCCTTGTGGAGCAGCGTCGCTGCCATTGCCTCTTGGGACTGGCCATGAGACATACATT
mRNA sequenceShow/hide mRNA sequence
ATGCGACGGGAAACTTCTGCGAGGAAGTCTCTTACTTGTAGGAAGCAGAGTAGCCATATCTCTGTACATTTCCGAGTAAACGTCGTAAAAATGCCCAACGGCGTTGATGG
TCCTCCTTGTAAGGAGCTCCTCCGCCGTGGGTGGTCTCATATTCCATCGCCTTGTGGAGCAGCGTCGCTGCCATTGCCTCTTGGGACTGGCCATGAGACATACATT
Protein sequenceShow/hide protein sequence
MRRETSARKSLTCRKQSSHISVHFRVNVVKMPNGVDGPPCKELLRRGWSHIPSPCGAASLPLPLGTGHETYI