; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010772 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010772
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAutophagy-related protein
Genome locationscaffold35:1879220..1879513
RNA-Seq ExpressionMS010772
SyntenyMS010772
Gene Ontology termsGO:0006914 - autophagy (biological process)
GO:0006995 - cellular response to nitrogen starvation (biological process)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004241 - Autophagy protein Atg8 ubiquitin-like
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603779.1 Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

XP_004134765.1 autophagy-related protein 8C [Cucumis sativus]6.1e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

XP_008439996.1 PREDICTED: autophagy-related protein 8C [Cucumis melo]4.7e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

XP_022142105.1 autophagy-related protein 8C-like [Momordica charantia]5.9e-3298.65Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ

XP_022950063.1 autophagy-related protein 8C-like [Cucurbita moschata]3.6e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KJW7 Autophagy-related protein2.9e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

A0A1S3B043 Autophagy-related protein2.3e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

A0A5D3CPT6 Autophagy-related protein2.3e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVP DLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

A0A6J1CL79 Autophagy-related protein2.8e-3298.65Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ

A0A6J1GDU9 Autophagy-related protein1.7e-2993.33Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ
        +YLVPADLTVGQFVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IYE NKDEDGFLYMSYSGENTF GFLGGQ
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTF-GFLGGQ

SwissProt top hitse value%identityAlignment
A2XXR7 Autophagy-related protein 8B2.2e-2988.73Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKLS EKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG L
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

A2YS06 Autophagy-related protein 8C2.2e-2991.3Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG

Q6Z1D5 Autophagy-related protein 8C2.2e-2991.3Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG

Q7XPR1 Autophagy-related protein 8B2.2e-2988.73Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKLS EKAIF+FVK+TLP T ALMSAIYEENKDEDGFLYM+YSGENTFG L
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

Q8S927 Autophagy-related protein 8c3.7e-2987.32Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG +
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

Arabidopsis top hitse value%identityAlignment
AT1G62040.1 Ubiquitin-like superfamily protein2.6e-3087.32Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG +
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

AT1G62040.2 Ubiquitin-like superfamily protein2.6e-3087.32Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY+ENKDEDGFLYM+YSGENTFG +
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

AT4G04620.1 Ubiquitin-like superfamily protein1.7e-2988.41Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG
        +YLVPADLT+GQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG

AT4G21980.1 Ubiquitin-like superfamily protein5.9e-3088.73Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG L
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL

AT4G21980.2 Ubiquitin-like superfamily protein5.9e-3088.73Show/hide
Query:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL
        +YLVPADLTVGQFVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIYEE+KDEDGFLYM+YSGENTFG L
Subjt:  RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATATCTTGTCCCAGCTGATTTGACTGTCGGACAGTTTGTTTACGTGGTACGGAAACGGATTAAACTTAGTGCTGAGAAAGCAATATTTGTATTTGTTAAGGACACACT
ACCTTCAACTGGTGCATTGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGGTTTCTTTACATGTCATACAGTGGAGAGAACACTTTTGGGTTCCTTGGAGGAC
AA
mRNA sequenceShow/hide mRNA sequence
AGATATCTTGTCCCAGCTGATTTGACTGTCGGACAGTTTGTTTACGTGGTACGGAAACGGATTAAACTTAGTGCTGAGAAAGCAATATTTGTATTTGTTAAGGACACACT
ACCTTCAACTGGTGCATTGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGGTTTCTTTACATGTCATACAGTGGAGAGAACACTTTTGGGTTCCTTGGAGGAC
AA
Protein sequenceShow/hide protein sequence
RYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFGFLGGQ