; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010780 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010780
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4228 domain-containing protein
Genome locationscaffold35:1924787..1925122
RNA-Seq ExpressionMS010780
SyntenyMS010780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603773.1 hypothetical protein SDJN03_04382, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2457.6Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPE-----KHSDE------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDG---RDDG
        MGNCCRG +ST V +G  RR  PP+     +H         KG+  G   E+KIRMTKKEL+ELVGWLNMADSSFEQVMARLV+VI++  GD     D  
Subjt:  MGNCCRGGASTVVAAGEERRDPPPE-----KHSDE------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDG---RDDG

Query:  TAQVARLRQQRSCSWRPSLHSIPEI
          Q+ +LRQQR  SWRPSL SIPEI
Subjt:  TAQVARLRQQRSCSWRPSLHSIPEI

KAG7033944.1 hypothetical protein SDJN02_03670, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2457.6Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPE-----KHSDE------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DDG
        MGNCCRG +ST V +G  RR  PP+     +H         KG+  G   E+KIRMTKKEL+ELVGWLNMADSSFEQVMARLV+VI++  GD     D  
Subjt:  MGNCCRGGASTVVAAGEERRDPPPE-----KHSDE------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DDG

Query:  TAQVARLRQQRSCSWRPSLHSIPEI
          Q+ +LRQQR  SWRPSL SIPEI
Subjt:  TAQVARLRQQRSCSWRPSLHSIPEI

XP_008441100.1 PREDICTED: uncharacterized protein LOC103485326 [Cucumis melo]4.7e-2561.34Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR
        MGNCC+G  ST V    +RR PP + H   +   G         LR EVKIRMTKKELEELVGWLNMADSSFE VMARLV+VI D  GD  +D   QV +
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR

Query:  LRQQRSCSWRPSLHSIPEI
        LRQQR  SWRPSL SIPEI
Subjt:  LRQQRSCSWRPSLHSIPEI

XP_022977330.1 uncharacterized protein LOC111477681 [Cucurbita maxima]2.1e-2558.73Show/hide
Query:  MGNCCRGGAST-VVAAGEERRDPPPEKHSDEKGAG-----------GGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DD
        MGNCCRG +ST VV+ G+ R  PP        GAG           G LR E+KIRMTKKEL+EL+GWLNMADSSFEQVMARLV+VI+D  GD     D+
Subjt:  MGNCCRGGAST-VVAAGEERRDPPPEKHSDEKGAG-----------GGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DD

Query:  GTAQVARLRQQRSCSWRPSLHSIPEI
           Q+ +LRQQR  SWRPSL SIPEI
Subjt:  GTAQVARLRQQRSCSWRPSLHSIPEI

XP_023544016.1 uncharacterized protein LOC111803724 [Cucurbita pepo subsp. pepo]1.1e-2457.6Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDE-----------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DDG
        MGNCCRG +ST V +G +RR  PP+  S             KG+  G   E+KIRMTKKEL+ELVGWLNMADSSFEQVMARLV+VI++  GD     D  
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDE-----------KGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DDG

Query:  TAQVARLRQQRSCSWRPSLHSIPEI
          Q+ +LRQQR  SWRPSL SIPEI
Subjt:  TAQVARLRQQRSCSWRPSLHSIPEI

TrEMBL top hitse value%identityAlignment
A0A0A0KHU7 Uncharacterized protein7.4e-2458.26Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGGGLRS----EVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQ
        MGNCC+  +ST V  G     PP + H   +   G  +     EVKIRMTKKEL+ELVGWLNMADSSFEQVMARLV+VI    GD  +D   QV +LRQQ
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGGGLRS----EVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQ

Query:  RSCSWRPSLHSIPEI
        R  SWRPSL SIPE+
Subjt:  RSCSWRPSLHSIPEI

A0A1S3B2N5 uncharacterized protein LOC1034853262.3e-2561.34Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR
        MGNCC+G  ST V    +RR PP + H   +   G         LR EVKIRMTKKELEELVGWLNMADSSFE VMARLV+VI D  GD  +D   QV +
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR

Query:  LRQQRSCSWRPSLHSIPEI
        LRQQR  SWRPSL SIPEI
Subjt:  LRQQRSCSWRPSLHSIPEI

A0A218XM66 uncharacterized protein LOC1162071213.3e-0835.25Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGA-------------------------GGGLRS--EVKIRMTKKELEELVGWLNMADSSFEQVMARLVS
        MGNCCR G+S++V AG+E       +  DE+ A                         GGG  S  EVKI++TKKELEEL+G  ++ + S EQV +RL++
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGA-------------------------GGGLRS--EVKIRMTKKELEELVGWLNMADSSFEQVMARLVS

Query:  VITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN
                      A   R    +   WRP L SIPE+N
Subjt:  VITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN

A0A5D3CNX5 Uncharacterized protein2.3e-2561.34Show/hide
Query:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR
        MGNCC+G  ST V    +RR PP + H   +   G         LR EVKIRMTKKELEELVGWLNMADSSFE VMARLV+VI D  GD  +D   QV +
Subjt:  MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGG--------GLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVAR

Query:  LRQQRSCSWRPSLHSIPEI
        LRQQR  SWRPSL SIPEI
Subjt:  LRQQRSCSWRPSLHSIPEI

A0A6J1IM02 uncharacterized protein LOC1114776811.0e-2558.73Show/hide
Query:  MGNCCRGGAST-VVAAGEERRDPPPEKHSDEKGAG-----------GGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DD
        MGNCCRG +ST VV+ G+ R  PP        GAG           G LR E+KIRMTKKEL+EL+GWLNMADSSFEQVMARLV+VI+D  GD     D+
Subjt:  MGNCCRGGAST-VVAAGEERRDPPPEKHSDEKGAG-----------GGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGR---DD

Query:  GTAQVARLRQQRSCSWRPSLHSIPEI
           Q+ +LRQQR  SWRPSL SIPEI
Subjt:  GTAQVARLRQQRSCSWRPSLHSIPEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.9.9e-0536.99Show/hide
Query:  EVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN
        E+KIR+TKK+L +L+  +N+ D +F+Q         + P  + R    A   RL       WRP L SIPE+N
Subjt:  EVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN

AT4G21920.1 unknown protein1.7e-0433.33Show/hide
Query:  RSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN
        R E+KIR+TKKELE+L+  + +   + E+++++L+    D  G    D T             W+P L SIPE++
Subjt:  RSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPEIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACTGCTGCAGAGGCGGAGCGTCAACTGTGGTGGCGGCCGGCGAGGAGCGGAGGGATCCGCCGCCGGAGAAGCATTCCGACGAGAAAGGGGCCGGGGGTGGCTT
GAGATCGGAGGTGAAGATAAGGATGACGAAGAAGGAGCTGGAGGAGTTGGTGGGATGGTTGAACATGGCGGATTCTAGTTTTGAACAGGTTATGGCTCGCCTCGTCAGCG
TGATTACCGATCCGCGTGGCGATGGACGTGATGACGGTACTGCCCAGGTGGCGCGTCTACGTCAGCAACGTTCGTGTTCCTGGAGGCCTTCTCTGCACAGCATTCCAGAG
ATTAAT
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACTGCTGCAGAGGCGGAGCGTCAACTGTGGTGGCGGCCGGCGAGGAGCGGAGGGATCCGCCGCCGGAGAAGCATTCCGACGAGAAAGGGGCCGGGGGTGGCTT
GAGATCGGAGGTGAAGATAAGGATGACGAAGAAGGAGCTGGAGGAGTTGGTGGGATGGTTGAACATGGCGGATTCTAGTTTTGAACAGGTTATGGCTCGCCTCGTCAGCG
TGATTACCGATCCGCGTGGCGATGGACGTGATGACGGTACTGCCCAGGTGGCGCGTCTACGTCAGCAACGTTCGTGTTCCTGGAGGCCTTCTCTGCACAGCATTCCAGAG
ATTAAT
Protein sequenceShow/hide protein sequence
MGNCCRGGASTVVAAGEERRDPPPEKHSDEKGAGGGLRSEVKIRMTKKELEELVGWLNMADSSFEQVMARLVSVITDPRGDGRDDGTAQVARLRQQRSCSWRPSLHSIPE
IN