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MS010784 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010784
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPatatin
Genome locationscaffold35:1941072..1941434
RNA-Seq ExpressionMS010784
SyntenyMS010784
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594656.1 hypothetical protein SDJN03_11209, partial [Cucurbita argyrosperma subsp. sororia]5.1e-4982.64Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK DV +
Subjt:  SNRFNGIPGFGYRILKEDVNY

XP_022142335.1 uncharacterized protein LOC111012477 [Momordica charantia]1.2e-61100Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILKEDVNY
Subjt:  SNRFNGIPGFGYRILKEDVNY

XP_022926407.1 uncharacterized protein LOC111433571 [Cucurbita moschata]3.0e-4982.64Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK+DV +
Subjt:  SNRFNGIPGFGYRILKEDVNY

XP_023003961.1 uncharacterized protein LOC111497407 [Cucurbita maxima]8.7e-4980.99Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DS+ SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK+D+ +
Subjt:  SNRFNGIPGFGYRILKEDVNY

XP_023518155.1 uncharacterized protein LOC111781699 [Cucurbita pepo subsp. pepo]1.1e-4881.82Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SF E+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK+DV +
Subjt:  SNRFNGIPGFGYRILKEDVNY

TrEMBL top hitse value%identityAlignment
A0A5D3CRM5 Uncharacterized protein5.3e-4480.67Show/hide
Query:  MYKGISTSRSFSEKM-GSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELS
        MYKG+S SRSFSEKM G+VAPLAIGTRGTVGSLVMKEIEYFT LELERHG S  I   A RR DSK SFWLLS TWKWKKR+  + NGILPNI SAVE S
Subjt:  MYKGISTSRSFSEKM-GSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELS

Query:  KSNRFNGIPGFGYRILKED
        KSNRFNGIPGFGYRILK+D
Subjt:  KSNRFNGIPGFGYRILKED

A0A6J1CKN5 uncharacterized protein LOC1110124775.6e-62100Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILKEDVNY
Subjt:  SNRFNGIPGFGYRILKEDVNY

A0A6J1EEE9 uncharacterized protein LOC1114335711.4e-4982.64Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DSK SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK+DV +
Subjt:  SNRFNGIPGFGYRILKEDVNY

A0A6J1IJL8 uncharacterized protein LOC1114776863.3e-4680.51Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MYKG+S SRSFSEKM  +APLAIGTRGTVGSLVMKEIEYFTK E+ERHG SQRI+ +ASRR D K SFWL+S TWKWKKR+    NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKED
        SNRFNGIPGF YRILK D
Subjt:  SNRFNGIPGFGYRILKED

A0A6J1KQQ8 uncharacterized protein LOC1114974074.2e-4980.99Show/hide
Query:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK
        MY+GIS S SFSE+MG+VAPLAIGTRGT+GSLVMKEIEYFTKLELERHGGSQR++ +ASRR DS+ SFWLLS +WKWKKRR  + NGILPNICSAVELSK
Subjt:  MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSK

Query:  SNRFNGIPGFGYRILKEDVNY
        SNRFNGIPGFGYRILK+D+ +
Subjt:  SNRFNGIPGFGYRILKEDVNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein2.1e-1644.04Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGGSQ--RITAEASRRGDSKPSFWLLSSTWKWKKRRS-GSTNGILPNICSAVELSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF            R G S+  + T +   R  S+   W   + W+ KKR++ G      P++CSAVE+S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTKLEL------ERHGGSQ--RITAEASRRGDSKPSFWLLSSTWKWKKRRS-GSTNGILPNICSAVELSKSNRFNGIPG

Query:  FGYRILKED
        F YRILK D
Subjt:  FGYRILKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGAT
CGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCA
CTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTT
GGTTACAGGATTCTCAAAGAAGATGTCAATTAC
mRNA sequenceShow/hide mRNA sequence
ATGTATAAAGGAATCAGCACAAGCAGAAGCTTCTCGGAGAAAATGGGCAGCGTTGCTCCACTAGCCATTGGCACGCGAGGCACTGTGGGGTCGCTGGTGATGAAGGAGAT
CGAGTACTTCACCAAGCTTGAACTCGAACGCCATGGCGGCTCCCAGAGGATAACTGCTGAAGCTTCGAGAAGAGGAGATTCAAAGCCAAGCTTCTGGCTTCTGTCGTCCA
CTTGGAAGTGGAAGAAGAGAAGATCAGGCAGCACCAATGGGATTCTCCCTAACATTTGCTCTGCTGTTGAATTGTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTT
GGTTACAGGATTCTCAAAGAAGATGTCAATTAC
Protein sequenceShow/hide protein sequence
MYKGISTSRSFSEKMGSVAPLAIGTRGTVGSLVMKEIEYFTKLELERHGGSQRITAEASRRGDSKPSFWLLSSTWKWKKRRSGSTNGILPNICSAVELSKSNRFNGIPGF
GYRILKEDVNY