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MS010792 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010792
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCysteine-rich PDZ-binding protein
Genome locationscaffold35:1990834..1991940
RNA-Seq ExpressionMS010792
SyntenyMS010792
Gene Ontology termsGO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR019367 - PDZ-binding protein, CRIPT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PWZ26244.1 hypothetical protein Zm00014a_009461 [Zea mays]3.5e-4594.62Show/hide
Query:  DVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        D GEKKL KVIVPDKWKEGASNT+ESGGRKINENKLLSKK RWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  DVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_022142069.1 cysteine-rich PDZ-binding protein [Momordica charantia]4.1e-4698.89Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_031257308.1 cysteine-rich PDZ-binding protein-like [Pistacia vera]7.8e-4596.67Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        E+KLAKVIVPDKWKEGASNT+E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_031258894.1 cysteine-rich PDZ-binding protein-like [Pistacia vera]3.5e-4597.78Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKLAKVIVPDKWKEGASNT+E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_038882901.1 cysteine-rich PDZ-binding protein [Benincasa hispida]4.6e-4597.78Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

TrEMBL top hitse value%identityAlignment
A0A0E0LS29 Cysteine-rich PDZ-binding protein6.4e-4596.67Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL KVIVPDKWKEGASNTHESGGRKINENKLLSKK RWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A2P5A629 Cysteine-rich PDZ-binding protein4.9e-4593.68Show/hide
Query:  VVDVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        V D  EKKLAKVIVPDKWKEGASNT E GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  VVDVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A3L6EYV5 Cysteine-rich PDZ-binding protein1.7e-4594.62Show/hide
Query:  DVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        D GEKKL KVIVPDKWKEGASNT+ESGGRKINENKLLSKK RWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  DVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A5D3CPV5 Cysteine-rich PDZ-binding protein6.4e-4596.67Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A6J1CKJ0 Cysteine-rich PDZ-binding protein2.0e-4698.89Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

SwissProt top hitse value%identityAlignment
O70333 Cysteine-rich PDZ-binding protein1.5e-2765.26Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Q3ZC66 Cysteine-rich PDZ-binding protein3.4e-2765.26Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Q567Z6 Cysteine-rich PDZ-binding protein3.4e-2763.16Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL +VI PD WK+GA NT ESGGRK+NENK+L SKK R+ PYG +    C ICK  VHQ  + YC  CAY KG+CAMCGK+V+DTK YKQ++V
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQD-AKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Q792Q4 Cysteine-rich PDZ-binding protein1.5e-2765.26Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Q9P021 Cysteine-rich PDZ-binding protein3.4e-2765.26Show/hide
Query:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        EKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ  + YC  CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  EKKLAKVIVPDKWKEGASNTHESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQ-DAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Arabidopsis top hitse value%identityAlignment
AT1G61780.1 postsynaptic protein-related6.6e-4281.44Show/hide
Query:  VVDVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        V D  EKKL+KVIVPDKWK+GA N  E GGRKINENKLLSKK RW+PY    TKC+ICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  VVDVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGTGGATGTAGGTGAAAAGAAGCTGGCAAAGGTAATTGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACATGAAAGCGGTGGTCGTAAAATTAACGAGAACAA
GCTCCTGTCGAAGAAGAAAAGATGGACTCCTTATGGAAATACTAAGTGCATAATTTGTAAGCAGCAAGTACACCAGGATGCCAAGTATTGTCACACATGTGCTTACAGCA
AGGGGGTTTGCGCCATGTGCGGGAAGCAAGTACTTGACACCAAGTTTTATAAACAGAGCAATGTG
mRNA sequenceShow/hide mRNA sequence
GTTGTGGATGTAGGTGAAAAGAAGCTGGCAAAGGTAATTGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACATGAAAGCGGTGGTCGTAAAATTAACGAGAACAA
GCTCCTGTCGAAGAAGAAAAGATGGACTCCTTATGGAAATACTAAGTGCATAATTTGTAAGCAGCAAGTACACCAGGATGCCAAGTATTGTCACACATGTGCTTACAGCA
AGGGGGTTTGCGCCATGTGCGGGAAGCAAGTACTTGACACCAAGTTTTATAAACAGAGCAATGTG
Protein sequenceShow/hide protein sequence
VVDVGEKKLAKVIVPDKWKEGASNTHESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDAKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV