; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold35:2009475..2010622
RNA-Seq ExpressionMS010794
SyntenyMS010794
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142059.1 uncharacterized protein LOC111012281 isoform X1 [Momordica charantia]1.1e-8771.81Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL------
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL      
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL------

Query:  -------------------------------------------------------------------VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE
                                                                           VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE
Subjt:  -------------------------------------------------------------------VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE

Query:  RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

XP_022142060.1 uncharacterized protein LOC111012281 isoform X2 [Momordica charantia]2.1e-97100Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC

Query:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

XP_022142061.1 uncharacterized protein LOC111012281 isoform X3 [Momordica charantia]1.9e-9599.46Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL GGAVC
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC

Query:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

XP_023002953.1 uncharacterized protein LOC111496704 isoform X2 [Cucurbita maxima]5.2e-5668.75Show/hide
Query:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA
        VIPSGEV  G+EK++   KILISDQTNRFQ  TKP+SF+IDMD FSN T+KEISQ+S ++RNFSRKG LRGGNKI QDH AA+DT+    ES+SP +GG 
Subjt:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA

Query:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD
        V G+A TLEKQAV  GLGS EE+GGG  G G  ER SFRR SFKRS Q C+WYLDPRKIF+ CATLSC+GTM+LIY AFSSGML+  E E +
Subjt:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD

XP_023517776.1 uncharacterized protein LOC111781429 isoform X2 [Cucurbita pepo subsp. pepo]1.0e-5669.43Show/hide
Query:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH--AADDTDSHTVESISPLVGG
        VIPSGEV  G+EK++   KILISDQTNR Q  TKP+SF+IDMD FS+ T+KEISQ+S I+RNFSRKG LRGGNKI QDH  AADDT+    +S+SP +GG
Subjt:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH--AADDTDSHTVESISPLVGG

Query:  AVCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD
         V G+A TLEKQAV  GLGSREELGGG  G G  ERLS RR+SFKRS Q C+WYLDPRKIF+LCATLSC+GTM+LIY AFSSGML+  E E +
Subjt:  AVCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD

TrEMBL top hitse value%identityAlignment
A0A6J1CJV0 uncharacterized protein LOC111012281 isoform X21.0e-97100Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC

Query:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

A0A6J1CKI0 uncharacterized protein LOC111012281 isoform X15.5e-8871.81Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL------
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL      
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL------

Query:  -------------------------------------------------------------------VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE
                                                                           VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE
Subjt:  -------------------------------------------------------------------VGGAVCGSATLEKQAVGLGSREELGGGSGGGGE

Query:  RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  RLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

A0A6J1CL28 uncharacterized protein LOC111012281 isoform X39.4e-9699.46Show/hide
Query:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC
        VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPL GGAVC
Subjt:  VIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVC

Query:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
        GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS
Subjt:  GSATLEKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS

A0A6J1KL18 uncharacterized protein LOC111496704 isoform X11.4e-5463.77Show/hide
Query:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA
        VIPSGEV  G+EK++   KILISDQTNRFQ  TKP+SF+IDMD FSN T+KEISQ+S ++RNFSRKG LRGGNKI QDH AA+DT+    ES+SP +GG 
Subjt:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA

Query:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG-----------------ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLS
        V G+A TLEKQAV  GLGS EE+GGG  G G                 ER SFRR SFKRS Q C+WYLDPRKIF+ CATLSC+GTM+LIY AFSSGML+
Subjt:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG-----------------ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLS

Query:  VEEGEFD
          E E +
Subjt:  VEEGEFD

A0A6J1KV36 uncharacterized protein LOC111496704 isoform X22.5e-5668.75Show/hide
Query:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA
        VIPSGEV  G+EK++   KILISDQTNRFQ  TKP+SF+IDMD FSN T+KEISQ+S ++RNFSRKG LRGGNKI QDH AA+DT+    ES+SP +GG 
Subjt:  VIPSGEV-YGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDH-AADDTDSHTVESISPLVGGA

Query:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD
        V G+A TLEKQAV  GLGS EE+GGG  G G  ER SFRR SFKRS Q C+WYLDPRKIF+ CATLSC+GTM+LIY AFSSGML+  E E +
Subjt:  VCGSA-TLEKQAV--GLGSREELGGGSGGGG--ERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21215.1 unknown protein2.3e-0934.5Show/hide
Query:  QNETKPESFV-IDMDGFSNGTSKEISQNS-RITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAV------------CGSATLEKQAVGLGS
        Q    P+ FV ID++ FSN   K+ S +S RITRN SRKG+ R  N+      A+  D       SPL G +              G+AT    AV    
Subjt:  QNETKPESFV-IDMDGFSNGTSKEISQNS-RITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAV------------CGSATLEKQAVGLGS

Query:  REEL---GGGSGGGG--------ERLSF-RRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFS
          ++      +  G          R  F R++SFKRS    +W LDP+KI L  ATLS +G++LLI    S
Subjt:  REEL---GGGSGGGG--------ERLSF-RRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFS

AT4G21215.2 unknown protein7.3e-0834.1Show/hide
Query:  QNETKPESFV-IDMDGFSNGTSKEISQNS-RIT--RNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAV------------CGSATLEKQAVGL
        Q    P+ FV ID++ FSN   K+ S +S RIT  RN SRKG+ R  N+      A+  D       SPL G +              G+AT    AV  
Subjt:  QNETKPESFV-IDMDGFSNGTSKEISQNS-RIT--RNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAV------------CGSATLEKQAVGL

Query:  GSREEL---GGGSGGGG--------ERLSF-RRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFS
            ++      +  G          R  F R++SFKRS    +W LDP+KI L  ATLS +G++LLI    S
Subjt:  GSREEL---GGGSGGGG--------ERLSF-RRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTTCGCCGATCAGGTAATACCGTCTGGCGAAGTTTATGGGCTGGAGAAATCGATGGATTCCGGGAAAATATTAATCTCCGATCAGACAAACAGATTTCAGAACGAAAC
AAAACCCGAAAGCTTCGTCATCGATATGGACGGTTTTTCCAACGGTACCAGCAAGGAAATTTCACAGAATTCAAGAATTACAAGGAATTTTAGCCGTAAAGGTGCGTTAC
GTGGCGGCAACAAGATCGCCCAGGATCATGCTGCTGATGATACAGATTCTCATACAGTAGAGTCCATCTCCCCATTAGTAGGCGGTGCGGTATGTGGGTCGGCCACGCTC
GAAAAGCAGGCGGTGGGATTGGGGTCCAGAGAAGAACTGGGCGGTGGCAGCGGCGGCGGCGGCGAAAGGCTGAGCTTTAGAAGAAACAGCTTCAAGCGATCTCCACAACC
TTGCAACTGGTACTTGGACCCCAGGAAGATCTTTTTGTTATGCGCCACGCTGTCTTGCGTGGGAACCATGCTGCTGATATACTTGGCGTTTTCATCTGGAATGTTGAGCG
TAGAAGAAGGGGAGTTTGATTCA
mRNA sequenceShow/hide mRNA sequence
TCTTTCGCCGATCAGGTAATACCGTCTGGCGAAGTTTATGGGCTGGAGAAATCGATGGATTCCGGGAAAATATTAATCTCCGATCAGACAAACAGATTTCAGAACGAAAC
AAAACCCGAAAGCTTCGTCATCGATATGGACGGTTTTTCCAACGGTACCAGCAAGGAAATTTCACAGAATTCAAGAATTACAAGGAATTTTAGCCGTAAAGGTGCGTTAC
GTGGCGGCAACAAGATCGCCCAGGATCATGCTGCTGATGATACAGATTCTCATACAGTAGAGTCCATCTCCCCATTAGTAGGCGGTGCGGTATGTGGGTCGGCCACGCTC
GAAAAGCAGGCGGTGGGATTGGGGTCCAGAGAAGAACTGGGCGGTGGCAGCGGCGGCGGCGGCGAAAGGCTGAGCTTTAGAAGAAACAGCTTCAAGCGATCTCCACAACC
TTGCAACTGGTACTTGGACCCCAGGAAGATCTTTTTGTTATGCGCCACGCTGTCTTGCGTGGGAACCATGCTGCTGATATACTTGGCGTTTTCATCTGGAATGTTGAGCG
TAGAAGAAGGGGAGTTTGATTCA
Protein sequenceShow/hide protein sequence
SFADQVIPSGEVYGLEKSMDSGKILISDQTNRFQNETKPESFVIDMDGFSNGTSKEISQNSRITRNFSRKGALRGGNKIAQDHAADDTDSHTVESISPLVGGAVCGSATL
EKQAVGLGSREELGGGSGGGGERLSFRRNSFKRSPQPCNWYLDPRKIFLLCATLSCVGTMLLIYLAFSSGMLSVEEGEFDS