; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010807 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010807
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB-box type zinc finger protein
Genome locationscaffold35:2140654..2140983
RNA-Seq ExpressionMS010807
SyntenyMS010807
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603735.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +D+ARLCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGPRLV TV+FCQ+C +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGGS-GCDDDDDEMENQVVPWLSLSS
        SNGGS G  D DDE ENQVVPWLSLSS
Subjt:  SNGGS-GCDDDDDEMENQVVPWLSLSS

TYK13089.1 putative zinc finger protein [Cucumis melo var. makuwa]4.3e-3967.74Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG---SG
        MK LC LC   A V+C AD A LCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGP LV TV+FC NC   +        E+ CGSSNGG   SG
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG---SG

Query:  C-----DDDDDEMENQVVPWLSLS
        C     DDDDDE+ENQVVPWLSLS
Subjt:  C-----DDDDDEMENQVVPWLSLS

XP_022950367.1 putative zinc finger protein At1g68190 [Cucurbita moschata]2.5e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +D+ARLCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGP+LV TV+FCQNC +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGGS-GCDDDDDEMENQVVPWLSLSS
        SNGGS G  D DDE ENQVVPWLSLSS
Subjt:  SNGGS-GCDDDDDEMENQVVPWLSLSS

XP_022977340.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita maxima]9.6e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +DEARLCWGCD KVH ANFLVGKH RVLLCH CQAPTPWNGSGPRLV TV+FCQNC +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGGS-GCDDDDDEMENQVVPWLSLSS
        SNGGS G  D DDE E+QVVPWLSLSS
Subjt:  SNGGS-GCDDDDDEMENQVVPWLSLSS

XP_023544021.1 zinc finger protein CONSTANS-LIKE 13-like [Cucurbita pepo subsp. pepo]3.3e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +D+ARLCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGPRLV TV+FCQNC +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGG-SGCDDDDDEMENQVVPWLSLSS
        SNGG  G  D DDE ENQVVPWLSLSS
Subjt:  SNGG-SGCDDDDDEMENQVVPWLSLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KHH6 B box-type domain-containing protein1.2e-3966.94Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG-----
        MK LC LC   A V+C +D A LCWGCD KVH ANF+VGKHLRVLLCH CQAPTPWNGSGP LV TV+FC NC            E+ CGSS+GG     
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG-----

Query:  SGCDDDDDEMENQVVPWLSLS
        SGCDDDDDE+ENQVVPWLSLS
Subjt:  SGCDDDDDEMENQVVPWLSLS

A0A5A7UBH5 Putative zinc finger protein6.1e-3966.4Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGGS---G
        MK LC LC   A V+C AD A LCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGP LV TV+FC NC   +        E+ CGSSNGG+   G
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGGS---G

Query:  C------DDDDDEMENQVVPWLSLS
        C      DDDDDE+ENQVVPWLSLS
Subjt:  C------DDDDDEMENQVVPWLSLS

A0A5D3CS61 Putative zinc finger protein2.1e-3967.74Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG---SG
        MK LC LC   A V+C AD A LCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGP LV TV+FC NC   +        E+ CGSSNGG   SG
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIR--------EEGCGSSNGG---SG

Query:  C-----DDDDDEMENQVVPWLSLS
        C     DDDDDE+ENQVVPWLSLS
Subjt:  C-----DDDDDEMENQVVPWLSLS

A0A6J1GEL4 putative zinc finger protein At1g681901.2e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +D+ARLCWGCD KVH ANFLVGKHLRVLLCH CQAPTPWNGSGP+LV TV+FCQNC +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGGS-GCDDDDDEMENQVVPWLSLSS
        SNGGS G  D DDE ENQVVPWLSLSS
Subjt:  SNGGS-GCDDDDDEMENQVVPWLSLSS

A0A6J1IM17 zinc finger protein CONSTANS-LIKE 13-like4.7e-3966.14Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS
        MK LC LC   A V+C +DEARLCWGCD KVH ANFLVGKH RVLLCH CQAPTPWNGSGPRLV TV+FCQNC +                   EEG GS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADI-----------------REEGCGS

Query:  SNGGS-GCDDDDDEMENQVVPWLSLSS
        SNGGS G  D DDE E+QVVPWLSLSS
Subjt:  SNGGS-GCDDDDDEMENQVVPWLSLSS

SwissProt top hitse value%identityAlignment
O82256 Zinc finger protein CONSTANS-LIKE 137.0e-0845.83Show/hide
Query:  LCSLC-KSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGC-QAPTPWNGSGPRLVPTVSFCQNC
        LC  C  S A V C AD A+LC  CD +VH AN L  KH R LLC  C ++P+       R V     CQNC
Subjt:  LCSLC-KSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGC-QAPTPWNGSGPRLVPTVSFCQNC

Q9C9F4 Putative zinc finger protein At1g681907.0e-0851.92Show/hide
Query:  MKTLCSLCKS-PANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQ
        M+ +C  CK+  A V C AD A LC  CD KVH+AN L G+HLR +LC  C+
Subjt:  MKTLCSLCKS-PANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQ

Q9LJB7 B-box zinc finger protein 324.4e-1039.29Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSS
        M + C LC + A++ C AD A LC  CD K HA+NFL  +H R ++C  C++ T    SGP L+P       C++     C SS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSS

Q9LQZ7 B-box zinc finger protein 213.1e-0842.22Show/hide
Query:  MKTLCSLC-KSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGP-----RLVPTVSFCQNCADIREEGCGSS
        MK  C +C K  A+V C ADEA LC GCD +VH AN L  KHLR  L +    P+  N S P     +    + FCQ    I  + C SS
Subjt:  MKTLCSLC-KSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGP-----RLVPTVSFCQNCADIREEGCGSS

Q9SYM2 B-box zinc finger protein 228.3e-0959.57Show/hide
Query:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL
        MK  C++C+ + A V+C ADEA LCW CD K+HAAN L GKH RV L
Subjt:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL

Arabidopsis top hitse value%identityAlignment
AT1G78600.1 light-regulated zinc finger protein 15.9e-1059.57Show/hide
Query:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL
        MK  C++C+ + A V+C ADEA LCW CD K+HAAN L GKH RV L
Subjt:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL

AT1G78600.2 light-regulated zinc finger protein 15.9e-1059.57Show/hide
Query:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL
        MK  C++C+ + A V+C ADEA LCW CD K+HAAN L GKH RV L
Subjt:  MKTLCSLCK-SPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLL

AT3G21150.1 B-box 323.1e-1139.29Show/hide
Query:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSS
        M + C LC + A++ C AD A LC  CD K HA+NFL  +H R ++C  C++ T    SGP L+P       C++     C SS
Subjt:  MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSS

AT4G27310.1 B-box type zinc finger family protein3.0e-2251.85Show/hide
Query:  CSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSSN
        C LC   A + C +D+A LCW CD KVH ANFLV KH R LLC  CQ+ TPW  +G RL PT S C++C  ++  G G  N
Subjt:  CSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSSN

AT5G54470.1 B-box type zinc finger family protein4.6e-2343.2Show/hide
Query:  KTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNC-----------------ADIREEGCGSS
        K  C LC   A + C +D+A LCW CD KVH ANFLV KH+R LLC  CQ+ TPW  SG  L PTVS C++C                  +  EE  G +
Subjt:  KTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNC-----------------ADIREEGCGSS

Query:  NGGSGCDDDDD------EMENQVVP
        +G    D++ D      E+ENQVVP
Subjt:  NGGSGCDDDDD------EMENQVVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACATTGTGCTCGCTGTGCAAGTCTCCGGCGAATGTGGTGTGTGGAGCAGACGAAGCGAGGCTGTGTTGGGGGTGCGATTGGAAGGTTCACGCCGCCAATTTTCT
GGTTGGGAAGCATTTGAGGGTTTTGCTCTGCCATGGCTGCCAGGCTCCGACGCCGTGGAATGGGTCTGGGCCCAGGCTCGTGCCGACGGTGTCGTTTTGCCAAAACTGCG
CTGACATTAGAGAGGAAGGATGTGGGAGCTCCAATGGCGGGAGCGGATGCGACGATGATGACGACGAGATGGAAAATCAAGTGGTTCCTTGGTTATCCCTCTCCTCCCAC
mRNA sequenceShow/hide mRNA sequence
ATGAAGACATTGTGCTCGCTGTGCAAGTCTCCGGCGAATGTGGTGTGTGGAGCAGACGAAGCGAGGCTGTGTTGGGGGTGCGATTGGAAGGTTCACGCCGCCAATTTTCT
GGTTGGGAAGCATTTGAGGGTTTTGCTCTGCCATGGCTGCCAGGCTCCGACGCCGTGGAATGGGTCTGGGCCCAGGCTCGTGCCGACGGTGTCGTTTTGCCAAAACTGCG
CTGACATTAGAGAGGAAGGATGTGGGAGCTCCAATGGCGGGAGCGGATGCGACGATGATGACGACGAGATGGAAAATCAAGTGGTTCCTTGGTTATCCCTCTCCTCCCAC
Protein sequenceShow/hide protein sequence
MKTLCSLCKSPANVVCGADEARLCWGCDWKVHAANFLVGKHLRVLLCHGCQAPTPWNGSGPRLVPTVSFCQNCADIREEGCGSSNGGSGCDDDDDEMENQVVPWLSLSSH