; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010816 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010816
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCHCH domain-containing protein
Genome locationscaffold35:2191862..2192380
RNA-Seq ExpressionMS010816
SyntenyMS010816
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142270.1 uncharacterized protein LOC111012432 [Momordica charantia]1.6e-7285.55Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPL
        MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT       
Subjt:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPL

Query:  WPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                          ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
Subjt:  WPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_022949732.1 uncharacterized protein LOC111453037 [Cucurbita moschata]3.0e-4264.61Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF
        MISL P  + NGSSF   SSNL   L PI    SNF  PL T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT  
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF

Query:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_022977984.1 uncharacterized protein LOC111478111 [Cucurbita maxima]6.6e-4264.04Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF
        MISL P  + NGSSF   SSNL   L PI    SNF  P  T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT  
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF

Query:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_023544671.1 uncharacterized protein LOC111804184 [Cucurbita pepo subsp. pepo]2.3e-4264.04Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF
        MISL P  + NGSSF F SSNL   L PI    SNF  P  T      K  F+   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT  
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF

Query:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
XP_038881387.1 uncharacterized protein LOC120072922 [Benincasa hispida]1.0e-4263.33Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRP----IPSNFALPLPTNSIILGKRNFRFRVVRAEQAG--GNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NGSSF + SSNL  N  P    I  NFA P  T +       FR    +AEQAG  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRP----IPSNFALPLPTNSIILGKRNFRFRVVRAEQAG--GNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT

Query:  VFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                                 ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  VFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
TrEMBL top hitse value%identityAlignment
A0A0A0KHI4 Uncharacterized protein1.4e-3756.67Show/hide
Query:  MISLGPCAYQNG--SSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNF-----RFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT
        MISL P  + NG  +SFP Y+S+     PIP           I + K NF      FR        G   Q+RTFLT+EEAGLVEVSGLSTHERFLCRLT
Subjt:  MISLGPCAYQNG--SSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNF-----RFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT

Query:  VFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                                 ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  VFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A1U8EE61 uncharacterized protein LOC1078448527.9e-3363.49Show/hide
Query:  KRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRL
        ++  +  VVRA   G   ++RR+FLT+EEAGLVE+SGLSTHERFLCRLT                         ISSLNLLRVIAE+E CSIEELNAGR+
Subjt:  KRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRL

Query:  CDWFLKDKLKREQNLDSAVLQWDDSD
        CDWFLKDKLKREQNLDSAVLQWDDSD
Subjt:  CDWFLKDKLKREQNLDSAVLQWDDSD
A0A6J1CKG5 uncharacterized protein LOC1110124327.8e-7385.55Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPL
        MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLT       
Subjt:  MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPL

Query:  WPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                          ISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
Subjt:  WPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A6J1GCY7 uncharacterized protein LOC1114530371.4e-4264.61Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF
        MISL P  + NGSSF   SSNL   L PI    SNF  PL T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT  
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF

Query:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
A0A6J1ISV2 uncharacterized protein LOC1114781113.2e-4264.04Show/hide
Query:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF
        MISL P  + NGSSF   SSNL   L PI    SNF  P  T      K  FR   +RAEQA  GN AQRRTFLT+EEAGLVEVSGLSTHERFLCRLT  
Subjt:  MISLGPCAYQNGSSFPFYSSNL-LNLRPIP---SNFALPLPTNSIILGKRNFRFRVVRAEQA-GGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVF

Query:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
                               ISSLNLL+VIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSD  F
Subjt:  LSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21445.1 unknown protein1.6e-3058.41Show/hide
Query:  NSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLD
        N  +RR+FL++ EAGLVE+SGL  HE+FLCRLT                         ISSLNLLRVI+E+E CSIEELNAG++CDWFLKDKLKRE N++
Subjt:  NSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPLWPSLINFQLPFILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLD

Query:  SAVLQWDDSDLTF
        SAVLQWDD D  F
Subjt:  SAVLQWDDSDLTF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCACTCGGACCCTGCGCTTACCAAAATGGATCCTCATTTCCGTTCTACTCTTCAAATCTTCTAAATCTCCGTCCAATTCCTTCCAATTTTGCACTCCCACTCCC
AACAAACTCAATAATCCTCGGAAAAAGAAACTTCAGATTCAGAGTTGTTCGCGCCGAACAGGCCGGAGGAAACAGCGCTCAAAGACGAACTTTCTTGACGGTCGAAGAGG
CCGGCCTCGTCGAAGTATCCGGCCTCAGCACTCACGAGCGCTTTCTGTGTCGTTTGACGGTATTTCTCTCTCTGCCTCTGTGGCCGTCGTTAATTAATTTCCAACTTCCT
TTCATTCTGTTTGTTTTTTTGCAGATATCGTCTCTGAATTTACTGCGAGTAATAGCGGAGGAAGAGAAATGTTCGATCGAGGAGTTGAATGCTGGCAGATTATGCGACTG
GTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGACTCCGCTGTTCTTCAATGGGATGATTCTGACCTGACCTTC
mRNA sequenceShow/hide mRNA sequence
ATGATCTCACTCGGACCCTGCGCTTACCAAAATGGATCCTCATTTCCGTTCTACTCTTCAAATCTTCTAAATCTCCGTCCAATTCCTTCCAATTTTGCACTCCCACTCCC
AACAAACTCAATAATCCTCGGAAAAAGAAACTTCAGATTCAGAGTTGTTCGCGCCGAACAGGCCGGAGGAAACAGCGCTCAAAGACGAACTTTCTTGACGGTCGAAGAGG
CCGGCCTCGTCGAAGTATCCGGCCTCAGCACTCACGAGCGCTTTCTGTGTCGTTTGACGGTATTTCTCTCTCTGCCTCTGTGGCCGTCGTTAATTAATTTCCAACTTCCT
TTCATTCTGTTTGTTTTTTTGCAGATATCGTCTCTGAATTTACTGCGAGTAATAGCGGAGGAAGAGAAATGTTCGATCGAGGAGTTGAATGCTGGCAGATTATGCGACTG
GTTTCTCAAGGATAAGTTGAAAAGAGAGCAGAATTTGGACTCCGCTGTTCTTCAATGGGATGATTCTGACCTGACCTTC
Protein sequenceShow/hide protein sequence
MISLGPCAYQNGSSFPFYSSNLLNLRPIPSNFALPLPTNSIILGKRNFRFRVVRAEQAGGNSAQRRTFLTVEEAGLVEVSGLSTHERFLCRLTVFLSLPLWPSLINFQLP
FILFVFLQISSLNLLRVIAEEEKCSIEELNAGRLCDWFLKDKLKREQNLDSAVLQWDDSDLTF