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MS010833 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010833
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationscaffold35:2315933..2316082
RNA-Seq ExpressionMS010833
SyntenyMS010833
Gene Ontology termsGO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40912.1 conserved hypothetical protein [Ricinus communis]2.9e-0665.91Show/hide
Query:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        RM  ++ +++ RR SGR IPKRGQVK+GI+VGLAH+V SIFSHS
Subjt:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

KAA0052717.1 hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa]1.6e-1285.71Show/hide
Query:  GEGARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        GE A+ MN INGQRLGRR SGRLIPKRGQVKMGIMVGLA TVTSIFS+S
Subjt:  GEGARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

KAG6603714.1 hypothetical protein SDJN03_04323, partial [Cucurbita argyrosperma subsp. sororia]8.3e-0669.23Show/hide
Query:  INGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH
        ING  L R++S RLIPKRGQV MGI+ G+AH+VTS+FSH
Subjt:  INGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH

KAG7026593.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-0978.57Show/hide
Query:  MNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH
        MN ING+R+ RR  GR IPKRGQVKMGIMVG+ HTVTSIFSH
Subjt:  MNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH

RZC03639.1 Retrovirus-related Pol polyprotein from transposon RE1 [Glycine soja]1.1e-0567.35Show/hide
Query:  EGARRMNEINGQR-LGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        +GAR    ING R   RRFSGR IPKRGQVK+GI+VGLA++V SIFS S
Subjt:  EGARRMNEINGQR-LGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

TrEMBL top hitse value%identityAlignment
A0A0A0KLE0 Uncharacterized protein6.2e-0769.77Show/hide
Query:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH
        R+N IN   L R+ S RLIPKRGQVK+GI+VG+AH+VTSIFSH
Subjt:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSH

A0A0S3QZK4 Uncharacterized protein5.3e-0663.83Show/hide
Query:  GARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        GAR  + ING+ + RRFSGR IPKRGQVK+GI++GLA +V SIFS +
Subjt:  GARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

A0A445JYT4 Retrovirus-related Pol polyprotein from transposon RE15.3e-0667.35Show/hide
Query:  EGARRMNEINGQR-LGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        +GAR    ING R   RRFSGR IPKRGQVK+GI+VGLA++V SIFS S
Subjt:  EGARRMNEINGQR-LGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

A0A5A7UDZ4 Uncharacterized protein7.6e-1385.71Show/hide
Query:  GEGARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        GE A+ MN INGQRLGRR SGRLIPKRGQVKMGIMVGLA TVTSIFS+S
Subjt:  GEGARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

B9S603 Uncharacterized protein1.4e-0665.91Show/hide
Query:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS
        RM  ++ +++ RR SGR IPKRGQVK+GI+VGLAH+V SIFSHS
Subjt:  RMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGGTGAAGGAGCAAGGAGGATGAACGAAATCAACGGTCAGAGATTGGGCAGGAGATTTTCCGGTCGTCTGATCCCGAAGAGAGGGCAGGTGAAGATGGGAATCATGGT
GGGCCTGGCCCATACTGTCACCTCCATCTTCTCCCACAGC
mRNA sequenceShow/hide mRNA sequence
GGTGGTGAAGGAGCAAGGAGGATGAACGAAATCAACGGTCAGAGATTGGGCAGGAGATTTTCCGGTCGTCTGATCCCGAAGAGAGGGCAGGTGAAGATGGGAATCATGGT
GGGCCTGGCCCATACTGTCACCTCCATCTTCTCCCACAGC
Protein sequenceShow/hide protein sequence
GGEGARRMNEINGQRLGRRFSGRLIPKRGQVKMGIMVGLAHTVTSIFSHS