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MS010836 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010836
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionctenidin-3-like
Genome locationscaffold35:2328339..2328743
RNA-Seq ExpressionMS010836
SyntenyMS010836
Gene Ontology termsGO:0007218 - neuropeptide signaling pathway (biological process)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13106.1 ctenidin-3-like [Cucumis melo var. makuwa]5.0e-5388.1Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SL A SRKDGGF G+FGP G GF DIPGFGKGWD+GIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

XP_004134728.1 ctenidin-3 [Cucumis sativus]4.8e-5691.27Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SLA A RKDGGFDG+FGP G GFGDIPGFGKGWD+GI+GGGYGGGYGGPKGGYGKGGIIRNSVVCK KGPCYNKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDCTKKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

XP_008439905.1 PREDICTED: ctenidin-3-like [Cucumis melo]5.0e-5388.1Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SL A SRKDGGF G+FGP G GF DIPGFGKGWD+GIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

XP_022926656.1 neuropeptide-like protein 31 [Cucurbita moschata]9.0e-5583.82Show/hide
Query:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC
        M   MAI T L+A+LLLSPA+SLA A     GGFDG+FGP G GF DIPGFGKGWD+GI+GGGYGGGYGGPKGGYGKGGIIRN+VVCKEKGPCYNKKVTC
Subjt:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC

Query:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        PAKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

XP_023517828.1 cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]1.3e-5382.35Show/hide
Query:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC
        M   MAI   L+A+LLLSP +SLA A     GGFDG+FGP G GF DIPGFGKGWD+GI+GGGYGGGYGGPKGGYGKGGIIRN+VVCKEKGPCYNKKVTC
Subjt:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC

Query:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        PAKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

TrEMBL top hitse value%identityAlignment
A0A0A0KHJ2 Uncharacterized protein2.3e-5691.27Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SLA A RKDGGFDG+FGP G GFGDIPGFGKGWD+GI+GGGYGGGYGGPKGGYGKGGIIRNSVVCK KGPCYNKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDCTKKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

A0A1S3AZW7 ctenidin-3-like2.4e-5388.1Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SL A SRKDGGF G+FGP G GF DIPGFGKGWD+GIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

A0A5A7UGS4 Ctenidin-3-like2.4e-5388.1Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SL A SRKDGGF G+FGP G GF DIPGFGKGWD+GIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

A0A5D3CRS6 Ctenidin-3-like2.4e-5388.1Show/hide
Query:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR
        FLIA+LLLSP+ SL A SRKDGGF G+FGP G GF DIPGFGKGWD+GIVGGGYGGGYGGPKGGYGKGGIIR  VVCKEKGPC+NKKVTCPAKCFSSYSR
Subjt:  FLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSR

Query:  SGKGYGGGGGGGGCTIDCTKKCIGYC
        SGKGYGGGGGGGGCTIDC KKCIGYC
Subjt:  SGKGYGGGGGGGGCTIDCTKKCIGYC

A0A6J1EFI3 neuropeptide-like protein 314.4e-5583.82Show/hide
Query:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC
        M   MAI T L+A+LLLSPA+SLA A     GGFDG+FGP G GF DIPGFGKGWD+GI+GGGYGGGYGGPKGGYGKGGIIRN+VVCKEKGPCYNKKVTC
Subjt:  MIHSMAIPTFLIALLLLSPAYSLAAASRK-DGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTC

Query:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        PAKCFSSYSRSGKG+GGGGGGGGCTIDCTKKCIGYC
Subjt:  PAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61255.1 BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)1.1e-1857.73Show/hide
Query:  GGGFGDIPGFGKGWDRGIV--GGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        G G G  PG       G +  G G GG Y    GGY KG  +R +V+C+EKG CY KK+TCPAKCF S SR GKGY  GGGGGGCTIDC KKC+ YC
Subjt:  GGGFGDIPGFGKGWDRGIV--GGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

AT4G21620.1 glycine-rich protein5.9e-3660.31Show/hide
Query:  MAIPTFLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCF
        M   + L+A LL+    S   ++R+  G DG+   G  G G IPGFG G+    VGGGYGGG+GGP GG+GKGG++R +V CKEKGPC  KK+ CPAKCF
Subjt:  MAIPTFLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCF

Query:  SSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
         S+SRSGKGYGGGGGGGGCT+DC KKCI YC
Subjt:  SSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

AT4G21620.2 glycine-rich protein5.5e-2676.56Show/hide
Query:  GGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC
        GG+GKGG++R +V CKEKGPC  KK+ CPAKCF S+SRSGKGYGGGGGGGGCT+DC KKCI YC
Subjt:  GGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCACTCCATGGCCATTCCCACTTTTCTCATCGCCCTCCTCCTCCTCTCGCCGGCCTACTCTCTCGCCGCCGCCTCTCGGAAGGACGGCGGCTTCGACGGGGTCTT
CGGACCCGGTGGCGGCGGGTTCGGCGACATACCCGGATTCGGAAAGGGCTGGGACAGGGGCATCGTCGGCGGGGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGGT
ACGGGAAGGGCGGCATCATAAGGAACTCCGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTCACGTGTCCGGCCAAGTGCTTCTCCTCCTACAGCCGATCG
GGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTACTGC
mRNA sequenceShow/hide mRNA sequence
ATGATTCACTCCATGGCCATTCCCACTTTTCTCATCGCCCTCCTCCTCCTCTCGCCGGCCTACTCTCTCGCCGCCGCCTCTCGGAAGGACGGCGGCTTCGACGGGGTCTT
CGGACCCGGTGGCGGCGGGTTCGGCGACATACCCGGATTCGGAAAGGGCTGGGACAGGGGCATCGTCGGCGGGGGATACGGCGGCGGTTACGGCGGCCCCAAAGGCGGGT
ACGGGAAGGGCGGCATCATAAGGAACTCCGTCGTGTGTAAAGAGAAAGGTCCTTGTTACAATAAGAAGGTCACGTGTCCGGCCAAGTGCTTCTCCTCCTACAGCCGATCG
GGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGCGGCTGCACCATCGACTGCACTAAGAAATGTATCGGCTACTGC
Protein sequenceShow/hide protein sequence
MIHSMAIPTFLIALLLLSPAYSLAAASRKDGGFDGVFGPGGGGFGDIPGFGKGWDRGIVGGGYGGGYGGPKGGYGKGGIIRNSVVCKEKGPCYNKKVTCPAKCFSSYSRS
GKGYGGGGGGGGCTIDCTKKCIGYC