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MS010846 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010846
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold35:2423072..2423392
RNA-Seq ExpressionMS010846
SyntenyMS010846
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4302194.1 unnamed protein product [Prunus armeniaca]4.9e-3273.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GPIE V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

KAG8647922.1 hypothetical protein MANES_09G126350v8 [Manihot esculenta]6.4e-3272.73Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

PON62413.1 Peptidyl-tRNA hydrolase, PTH [Trema orientale]4.9e-3273.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GPIE V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

XP_008234558.1 PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Prunus mume]4.9e-3273.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GPIE V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

XP_015575168.1 LOW QUALITY PROTEIN: peptidyl-tRNA hydrolase 2, mitochondrial, partial [Ricinus communis]6.4e-3272.73Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

TrEMBL top hitse value%identityAlignment
A0A067JD80 Aminoacyl-tRNA hydrolase3.1e-3272.73Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

A0A2P5CMY7 Aminoacyl-tRNA hydrolase2.4e-3273.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GPIE V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

A0A2P5DW67 Aminoacyl-tRNA hydrolase3.1e-3272.73Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

A0A6J5WSI1 Aminoacyl-tRNA hydrolase2.4e-3273.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GPIE V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

A0A6P5SJE8 Aminoacyl-tRNA hydrolase3.1e-3272.73Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL H + KALN WEMCAQPKVV K ESEE++L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        DD+ G LKLL
Subjt:  DDINGWLKLL

SwissProt top hitse value%identityAlignment
O13830 Probable peptidyl-tRNA hydrolase 22.1e-0939.09Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENV-LFCEMGKSLKLPTHITIDAGRTRIAHCSKLAI---IGPIEV
        LVVR DL M KGKIA QC+H  L  YK         +  WE   Q K+  + ++EE + L      SL L   +  DAGRT+IA  S   +    GP+ V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENV-LFCEMGKSLKLPTHITIDAGRTRIAHCSKLAI---IGPIEV

Query:  -DDINGWLKL
         +++ G LKL
Subjt:  -DDINGWLKL

O97067 Probable peptidyl-tRNA hydrolase 23.1e-1339.64Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVLFC--EMGKSLKLPTHITIDAGRTRIAHCSKLAI-IGP---IE
        LVVRNDL+MGKGKIA QC H  +G Y++    + + L  WE C   K+  +   E  L    +  +  +L T +  DAGRT+I   SK  + +GP    +
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVLFC--EMGKSLKLPTHITIDAGRTRIAHCSKLAI-IGP---IE

Query:  VDDINGWLKLL
        +D + G LKLL
Subjt:  VDDINGWLKLL

Q3ZBL5 Peptidyl-tRNA hydrolase 2, mitochondrial7.9e-1745.45Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVL--FCEMGKSLKLPTHITIDAGRTRIAHCSKLAI-IGPIE---
        LVVRNDL+MGKGK+A QCSH  +  YK++   + + L  WE C QPKVV K  +E  L       K L L   +  DAGRT+IA  S+  + IGP     
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVL--FCEMGKSLKLPTHITIDAGRTRIAHCSKLAI-IGPIE---

Query:  VDDINGWLKL
        +D + G LKL
Subjt:  VDDINGWLKL

Q8R2Y8 Peptidyl-tRNA hydrolase 2, mitochondrial3.5e-1744.55Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVL--FCEMGKSLKLPTHITIDAGRTRIAHCSKLAI---IGPIE-
        LVVR DL+MGKGK+A QCSH  +  YK+    S + L  WE C QPKVV K  +E+ L       K+L L   +  DAGRT+I   S+  +    GP+E 
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVL--FCEMGKSLKLPTHITIDAGRTRIAHCSKLAI---IGPIE-

Query:  VDDINGWLKL
        +D++ G LKL
Subjt:  VDDINGWLKL

Q9Y3E5 Peptidyl-tRNA hydrolase 2, mitochondrial2.7e-1745.45Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVLFCEM--GKSLKLPTHITIDAGRTRIAHCSKLAI-IGPIE---
        LVVRNDL+MGKGK+A QCSH  +  YK++   + + L  WE C QPKVV K  +E  L   +   K L L   +  DAGRT+IA  S+  + IGP     
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVLFCEM--GKSLKLPTHITIDAGRTRIAHCSKLAI-IGPIE---

Query:  VDDINGWLKL
        +D + G LKL
Subjt:  VDDINGWLKL

Arabidopsis top hitse value%identityAlignment
AT3G03010.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.8e-3266.36Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL   + KALN WE CAQPKVV K ESEE +L   E  K+LKLPTHITIDAG+T+IA  S+  +AI+GP++ V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        D++ G LKL+
Subjt:  DDINGWLKLL

AT3G03010.2 Peptidyl-tRNA hydrolase II (PTH2) family protein1.8e-3266.36Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL   + KALN WE CAQPKVV K ESEE +L   E  K+LKLPTHITIDAG+T+IA  S+  +AI+GP++ V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVLFC-EMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        D++ G LKL+
Subjt:  DDINGWLKLL

AT4G32900.1 Peptidyl-tRNA hydrolase II (PTH2) family protein5.3e-0847.37Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVV--CKESEE
        LVVR DL+M  GKIA+QC+H   G+Y +L       L  WE   QPK+V  CK  +E
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVV--CKESEE

AT4G32900.2 Peptidyl-tRNA hydrolase II (PTH2) family protein8.1e-1744.14Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVV--CKESEENVLFCEMGKSLKLPTHITIDAGRTRIAHCSKLAII---GPIE-
        LVVR DL+M  GKIA+QC+H   G+Y +L       L  WE   QPK+V  CK  +E     E  +S+ LPT +  DAGRT +A  S+  +    GP E 
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVV--CKESEENVLFCEMGKSLKLPTHITIDAGRTRIAHCSKLAII---GPIE-

Query:  VDDINGWLKLL
        VD I G L LL
Subjt:  VDDINGWLKLL

AT5G16870.1 Peptidyl-tRNA hydrolase II (PTH2) family protein3.1e-3267.27Show/hide
Query:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVL-FCEMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V
        LVVRNDL+MGKGKIA QCSH TLGLYKKL   + KAL+ WE CAQPKVV K E E+ +L   E  KSLKLPTHITIDAGRT+IA  S+  +AI+GP+E V
Subjt:  LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCK-ESEENVL-FCEMGKSLKLPTHITIDAGRTRIAHCSK--LAIIGPIE-V

Query:  DDINGWLKLL
        D++ G LKLL
Subjt:  DDINGWLKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGGTTGTGAGAAATGATTTGGAAATGGGGAAGGGAAAAATTGCGACCCAGTGCAGTCACACAACTTTGGGTCTCTATAAGAAGCTCTGTCACCATTCACTGAAAGCCTT
GAATTGGTGGGAGATGTGTGCACAACCCAAGGTGGTTTGTAAAGAAAGTGAGGAAAACGTGCTATTTTGTGAGATGGGAAAATCATTGAAGTTACCAACCCATATTACCA
TTGATGCTGGAAGAACTCGGATTGCTCATTGCTCCAAATTAGCAATTATTGGTCCTATAGAAGTGGATGATATAAATGGTTGGTTGAAACTCTTG
mRNA sequenceShow/hide mRNA sequence
TTGGTTGTGAGAAATGATTTGGAAATGGGGAAGGGAAAAATTGCGACCCAGTGCAGTCACACAACTTTGGGTCTCTATAAGAAGCTCTGTCACCATTCACTGAAAGCCTT
GAATTGGTGGGAGATGTGTGCACAACCCAAGGTGGTTTGTAAAGAAAGTGAGGAAAACGTGCTATTTTGTGAGATGGGAAAATCATTGAAGTTACCAACCCATATTACCA
TTGATGCTGGAAGAACTCGGATTGCTCATTGCTCCAAATTAGCAATTATTGGTCCTATAGAAGTGGATGATATAAATGGTTGGTTGAAACTCTTG
Protein sequenceShow/hide protein sequence
LVVRNDLEMGKGKIATQCSHTTLGLYKKLCHHSLKALNWWEMCAQPKVVCKESEENVLFCEMGKSLKLPTHITIDAGRTRIAHCSKLAIIGPIEVDDINGWLKLL