; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS010857 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS010857
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationscaffold35:2527647..2535204
RNA-Seq ExpressionMS010857
SyntenyMS010857
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]1.2e-23693.2Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQ       ++ I  PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
         GFVVVETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_022142125.1 RNA polymerase II transcription factor B subunit 2 [Momordica charantia]4.2e-23788.71Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
        LGLVKLQQ      + F+   PT  ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Subjt:  LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ

Query:  AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
         +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
Subjt:  AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]7.9e-23692.76Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQ      + F+   PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]5.1e-23592.54Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQ      + F+   PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]1.0e-23592.98Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLI+GEVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQ      + F+   PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 25.9e-23793.2Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQ       ++ I  PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
         GFVVVETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 27.4e-22488.77Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ                   
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQ-------------------

Query:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSA
              RDKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQ       
Subjt:  ------RDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSA

Query:  TFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAE
        ++ I  PT  ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAE
Subjt:  TFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAE

Query:  RIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        RIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  RIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 22.0e-23788.71Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
        LGLVKLQQ      + F+   PT  ATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ
Subjt:  LGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ

Query:  AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
         +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
Subjt:  AITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 23.6e-23492.32Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LY NAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQ      + F+   PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 23.8e-23692.76Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQ      + F+   PT  ATNLSMSLADSSSRK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        QGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 41.6e-6132.59Show/hide
Query:  KNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSRKQGFVV
        Y + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GL     VF     +        A NLS  +S A  +  + GF+V
Subjt:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETN+R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

P60027 General transcription factor IIH subunit 47.0e-6232.39Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GL     VF     +        A NLS  +S A  +  
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR

Query:  KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVD
        + GF+VVETN+R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+ 
Subjt:  KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVD

Query:  ITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
         T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  ITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

Q54C29 General transcription factor IIH subunit 41.0e-6030.82Show/hide
Query:  VASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFI-------------------------
        +ASL +  L+ LY++ + C+AILRSLPP +K+++L+ML ++        ++W     + ++K +L +L  L++                           
Subjt:  VASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFI-------------------------

Query:  --ETADRKRETTYRLNPTFQANLQKLLI-YGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEA
          +   ++ E T RLNP FQ N+++ L+   +V+           + PS++DL++Y+  QWE  L  L  S    +PS + S ++       L++++ + 
Subjt:  --ETADRKRETTYRLNPTFQANLQKLLI-YGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEA

Query:  PRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQ-QVFLLTSATFLIDM
          +T  GF+FLL +   Q+W ++  Y+ + E++         DL+SFL  LSF   G  Y +  L+E+Q+  +  L   GL+ ++    +L   T LI  
Subjt:  PRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQ-QVFLLTSATFLIDM

Query:  PTFATNLSMSLADSSSR-----KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERI
         T    LS+  + SS R     +QG++V+ETN+R+YAY+SS L   +L LF ++ Y+LPNL VG IT+ES+  A  +GITA+Q I F++ N+HP  A   
Subjt:  PTFATNLSMSLADSSSR-----KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERI

Query:  PSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRR
          +P+ V +QI LWE++ NR+  T +  Y+ FP+ + + A   +A+E +  +W       LVVK + +  +R  +++
Subjt:  PSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRR

Q680U9 General transcription and DNA repair factor IIH subunit TFB21.8e-19575.6Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQ      + F+   PT  ATNLS+SLADSS+RK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        +GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 47.0e-6232.39Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GL     VF     +        A NLS  +S A  +  
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLS--MSLADSSSR

Query:  KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVD
        + GF+VVETN+R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+ 
Subjt:  KQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVD

Query:  ITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
         T    Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  ITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related1.3e-19675.6Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQ      + F+   PT  ATNLS+SLADSS+RK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        +GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

AT4G17020.2 transcription factor-related1.3e-19675.6Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQ      + F+   PT  ATNLS+SLADSS+RK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        +GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

AT4G17020.3 transcription factor-related1.3e-19675.6Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQ      + F+   PT  ATNLS+SLADSS+RK
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPT-FATNLSMSLADSSSRK

Query:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI
        +GFVV+ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++
Subjt:  QGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDI

Query:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        T AHFYDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  TPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTCATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAATCTCTATGAGAATGCATTTATCTGCGAAGCCATTCT
CAGGTCACTTCCACCTCTAGCCAAGAAGTTCGTTTTACAAATGTTATACATTGAAGCTCCAGTAGCAGCCAAGTCCATGGAGGAGTGGGTGCTTTCAGATGGAGTCTCAA
AGTATAAGGTTGCCCTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACATTCCAAGCAAACCTC
CAAAAGCTTTTAATATATGGTGAAGTTCTAGCCAGGGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTTGATCAATG
GGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCATCAAATATCAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTCTAAGTCAGAGGGATA
AAGAAGCTCCACGACTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACTCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATCGATACACTAACAGAAGAACAGAGGTATGCAATCAAGGA
TCTTGCTGATCTGGGACTTGTTAAACTTCAGCAGGTTTTTTTGCTAACCTCTGCTACTTTTTTAATTGACATGCCGACCTTTGCTACAAATCTTTCAATGAGTTTGGCAG
ATTCTTCTTCAAGGAAACAAGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAGACTACATTGTGAAATATTACGTCTTTTTTCAAGGATT
GAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGAATTACGGCAGAGCAGGCAATTACTTTTCTGCAGCAGAA
TGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGCTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCCGCACATT
TTTACGACGAATTCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGTGACTACGCCCGAGAATGGAACGGGTTGCTATGGGAGGACTCGAAAAACATGCGGCTCGTAGTGAAG
GCGGACGTACACACACATATGCGGGAACATCTTCGTCGTCAAAAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTCATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAATCTCTATGAGAATGCATTTATCTGCGAAGCCATTCT
CAGGTCACTTCCACCTCTAGCCAAGAAGTTCGTTTTACAAATGTTATACATTGAAGCTCCAGTAGCAGCCAAGTCCATGGAGGAGTGGGTGCTTTCAGATGGAGTCTCAA
AGTATAAGGTTGCCCTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACATTCCAAGCAAACCTC
CAAAAGCTTTTAATATATGGTGAAGTTCTAGCCAGGGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTTGATCAATG
GGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCATCAAATATCAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTCTAAGTCAGAGGGATA
AAGAAGCTCCACGACTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACTCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATCGATACACTAACAGAAGAACAGAGGTATGCAATCAAGGA
TCTTGCTGATCTGGGACTTGTTAAACTTCAGCAGGTTTTTTTGCTAACCTCTGCTACTTTTTTAATTGACATGCCGACCTTTGCTACAAATCTTTCAATGAGTTTGGCAG
ATTCTTCTTCAAGGAAACAAGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAGACTACATTGTGAAATATTACGTCTTTTTTCAAGGATT
GAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGAATTACGGCAGAGCAGGCAATTACTTTTCTGCAGCAGAA
TGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGCTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCCGCACATT
TTTACGACGAATTCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGTGACTACGCCCGAGAATGGAACGGGTTGCTATGGGAGGACTCGAAAAACATGCGGCTCGTAGTGAAG
GCGGACGTACACACACATATGCGGGAACATCTTCGTCGTCAAAAA
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERG
VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQVFLLTSATFLIDMPTFATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRI
EYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVK
ADVHTHMREHLRRQK